microRNA Secondary Strucutre Prediction

Query Summary

Query Type Family Accession Family ID miRBase ID1 miRBase ID2 # of members Conserved Structure
MI0003345 member_ID MIPF0000002 let-7MI0003345 tni-let-7b 124 Structure

Stem-loop sequence(s) 
>tni-let-7b MI0003345 Tetraodon nigroviridis let-7b stem-loop
CAGGGUGAGGUAGUAGGUUGUGUGGUUUCAGGGUUGUGAUUUUGCCCCAUCAGGAGCUAA
CUAUACAACCUACUGCCUUCCCUG
Mature sequence(s) 
>tni-let-7b MIMAT0003017 Tetraodon nigroviridis let-7b
UGAGGUAGUAGGUUGUGUGGUU
RNA structure prediction - By RNAfold in ViennaRNA package

Download: RNAfold.pdf RNAdot.pdf

Process completed for MI0003345

Question/Comment to Junguk Hur