microRNA Secondary Strucutre Prediction

Query Summary

Query	Type	Family Accession	Family ID	miRBase ID1	miRBase ID2	# of members	Conserved Structure
MI0003214	member_ID	MIPF0000002	let-7	MI0003214	tni-let-7e	124	Structure

Stem-loop sequence(s)

>tni-let-7e MI0003214 Tetraodon nigroviridis let-7e stem-loop
GCUGUCCUUGGGGCUGAGGUAGUAGAUUGAAUAGUUGUGGGGUUGUGUGACCUCUAUGUG
AGAUAACUAUACAAUCUACUGUCUUUCCCAAGGAGACAGC

Mature sequence(s)

>tni-let-7e MIMAT0002899 Tetraodon nigroviridis let-7e
UGAGGUAGUAGAUUGAAUAGUU

RNA structure prediction - By RNAfold in ViennaRNA package

Download: RNAfold.pdf RNAdot.pdf

Process completed for MI0003214

Question/Comment to Junguk Hur