microRNA Secondary Strucutre Prediction

Query Summary

Query	Type	Family Accession	Family ID	miRBase ID1	miRBase ID2	# of members	Conserved Structure
MI0001021	member_ID	MIPF0000015	MIR399	MI0001021	ath-mir399b	49	Structure

Stem-loop sequence(s)

>ath-mir399b MI0001021 Arabidopsis thaliana miR399b stem-loop
UCACUAGUUUUAGGGCGCCUCUCCAUUGGCAGGUCCUUUACUUCCAAAUAUACACAUACA
UAUAUGAAUAUCGAAAAUUUCCGAUGAUCGAUUUAUAAAUGACCUGCCAAAGGAGAGUUG
CCCUGAAACUGGUUC

Mature sequence(s)

>ath-miR399b MIMAT0000952 Arabidopsis thaliana miR399b
UGCCAAAGGAGAGUUGCCCUG

RNA structure prediction - By RNAfold in ViennaRNA package

Download: RNAfold.pdf RNAdot.pdf

Process completed for MI0001021

Question/Comment to Junguk Hur