microRNA Secondary Strucutre Prediction

Query Summary

Query	Type	Family Accession	Family ID	miRBase ID1	miRBase ID2	# of members	Conserved Structure
MI0000833	member_ID	MIPF0000002	let-7	MI0000833	rno-let-7f-1	124	Structure

Stem-loop sequence(s)

>rno-let-7f-1 MI0000833 Rattus norvegicus let-7f-1 stem-loop
AUCAGAGUGAGGUAGUAGAUUGUAUAGUUGUGGGGUAGUGAUUUUACCCUGUUUAGGAGA
UAACUAUACAAUCUAUUGCCUUCCCUGAG

Mature sequence(s)

>rno-let-7f MIMAT0000778 Rattus norvegicus let-7f
UGAGGUAGUAGAUUGUAUAGUU

RNA structure prediction - By RNAfold in ViennaRNA package

Download: RNAfold.pdf RNAdot.pdf

Process completed for MI0000833

Question/Comment to Junguk Hur