microRNA Secondary Strucutre Prediction

Query Summary

Query	Type	Family Accession	Family ID	miRBase ID1	miRBase ID2	# of members	Conserved Structure
MI0000601	member_ID	MIPF0000002	let-7	MI0000601	rno-let-7d	124	Structure

Stem-loop sequence(s)

>rno-let-7d MI0000601 Rattus norvegicus let-7d stem-loop
UGGGCUCCUAGGAAGAGGUAGUAGGUUGCAUAGUUUUAGGGCAGAGAUUUUGCCCACAAG
GAGUUAACUAUACGACCUGCUGCCUUUCUUAGGGCCUU

Mature sequence(s)

>rno-let-7d MIMAT0000562 Rattus norvegicus let-7d
AGAGGUAGUAGGUUGCAUAGU

>MIMAT0000563 Rattus norvegicus let-7d*
CUAUACGACCUGCUGCCUUUCU

RNA structure prediction - By RNAfold in ViennaRNA package

Download: RNAfold.pdf RNAdot.pdf

Process completed for MI0000601

Question/Comment to Junguk Hur