HUGO ID Detailed Result 132


HUGO ID 132
Symbol ACTB
Name actin, beta
#Occurrence 21
#Paper 4

 


PMID Match String Actual String Score Flanking text Edited by Edit
16014720beta-actinbeta-actin0.3transcription-PCR analysis as described previously (Wu Wu et al. 2003 beta-actin were as follows MPO 5'-AGGATAGGACTGGATTGCCTG-3' (forward) forward and 5'-GTGGTGATGCCAGTGTTGTCA-3' (reverse); 
16014720beta-actinbeta-actin0.3as follows MPO 5'-AGGATAGGACTGGATTGCCTG-3' (forward) forward and 5'-GTGGTGATGCCAGTGTTGTCA-3' (reverse); reverse beta-actin 5'-CTTTGATGTCACGCACGATTTC-3' (forward) forward and 5'-GGGCCGCTCTAGGCACCAA-3' (reverse) reverse 
16014720beta-actinbeta-actin0.3blot analysis as described previously (Wu Wu et al. 2003 beta-actin antibody (1:10,000; 1 10 000 Sigma St Louis MO 
16014720beta-actinbeta-actin0.3in mice there was no significant difference in MPO to beta-actin ratios in the striatum (PD, PD 1.1 _amp_#177 0.8 vs 
16014720beta-actinbeta-actin0.3tissues from stage 4 HD patients had higher GFAP to beta-actin ratios (HD, HD 0.7 _amp_#177 0.1 vs controls 0.1 _amp_#177 
16014720beta-actinbeta-actin0.3_lt_ 0.01 n = 3-4 as well as MPO to beta-actin ratios (HD, HD 0.8 _amp_#177 0.2 vs controls 0.2 _amp_#177 
16120782beta-actinbeta-actin0.35'-GAC-TCC-ACG-ACA-TAC-TCA-GC-3' were used as housekeeping control for SOCS-1 and 3 beta-actin forward 5'-CAC-AGC-TTC-TTT-GCA-GCT-CCT-T-3' and reverse 5'-TCA-GGA-TAC-CTC-TCT-TGC-TCT-GG-3' were used as housekeeping control 
16120782beta-actinbeta-actin0.3and human SOD1 transcripts the differences in C T between beta-actin and SOD1 were determined and expressed as x -fold difference 
16120782beta-actinbeta-actin0.3SOD1 were determined and expressed as x -fold difference from beta-actin expression using the following equation 2 
18436268beta-actinbeta-actin0.3Afterwards the blots were stripped and stained with beta-actin antibody (1:4000, 1 4000 Cell signaling MA USA 
16014720beta actinbeta actin1.0total rna was extracted from selected brain regions and at selected time points after mptp and used for reverse transcription pcr analysis as described previously wu et al. 2003 beta actin were as follows: mpo 5' aggataggactggattgcctg 3' forward and 5' gtggtgatgccagtgttgtca 3' reverse ; beta actin 5' ctttgatgtcacgcacgatttc 3' forward and 5' gggccgctctaggcaccaa 3' reverse .  
16014720beta actinbeta actin1.0 were as follows: mpo 5' aggataggactggattgcctg 3' forward and 5' gtggtgatgccagtgttgtca 3' reverse ; beta actin 5' ctttgatgtcacgcacgatttc 3' forward and 5' gggccgctctaggcaccaa 3' reverse .  
16014720beta actinbeta actin1.0mouse brain protein extracts from selected regions were prepared and used for western blot analysis as described previously wu et al. 2003 beta actin antibody 1:10 000; sigma st louis mo .  
16014720beta actinbeta actin1.0like in mice there was no significant difference in mpo to beta actin ratios in the striatum pd 1.1 _amp_#177; 0.8 vs controls 1.4 _amp_#177; 0.8; p > 0.05; n = 7 or cerebellum pd 0.8 _amp_#177; 0.2 vs controls 1.0 _amp_#177; 0.3; p > 0.05; n = 7 between the pd and con 
16014720beta actinbeta actin1.0conversely we found that caudate nucleus tissues from stage 4 hd patients had higher gfap to beta actin ratios hd 0.7 _amp_#177; 0.1 vs controls 0.1 _amp_#177; 0.1; p _lt_ 0.01; n = 3 4 as well as mpo to beta actin ratios hd 0.8 _amp_#177; 0.2 vs controls 0.2 _amp_#177; 0.1; p _lt_ 0.05; n = 5 6 .  
16014720beta actinbeta actin1.0 ratios hd 0.7 _amp_#177; 0.1 vs controls 0.1 _amp_#177; 0.1; p _lt_ 0.01; n = 3 4 as well as mpo to beta actin ratios hd 0.8 _amp_#177; 0.2 vs controls 0.2 _amp_#177; 0.1; p _lt_ 0.05; n = 5 6 .  
16120782beta actinbeta actin1.0afterward the blots were stripped and stained with a monoclonal anti beta actin antibody at 1:10 000 dilution sigma aldrich taufkirchen germany .  
16120782beta actinbeta actin1.0glyceraldehyde 3 phosphate dehydrogenase forward 5' tca cca ggg ctg cca ttt gc 3' and reverse 5' gac tcc acg aca tac tca gc 3' were used as housekeeping control for socs 1 and 3; beta actin forward 5' cac agc ttc ttt gca gct cct t 3' and reverse 5' tca gga tac ctc tct tgc tct gg 3' were used as housekeeping control for mouse and human sod1.  
16120782beta actinbeta actin1.0for the calculation of the relative abundancies of mouse and human sod1 transcripts the differences in c t between beta actin and sod1 were determined and expressed as x fold difference from beta actin expression using the following equation: 2 .  
17008387beta actinbeta actin1.0easome 20s lmp7 dilution 1:1000; abcam cambridge uk rabbit polyclonal anti proteasome 20s x dilution 1:1000; abcam rabbit polyclonal anti glt 1 dilution 1:1000; calbiochem la jolla ca monoclonal anti beta actin dilution 1:4000 sigma or rabbit polyclonal anti ubiquitin antibodies dilution 1:1000; dakocytomation denmark a/s glostrup denmark and horseradish peroxidase labeled anti mouse igg dilution 1:4000; ge 
18436268beta actinbeta actin1.0afterwards the blots were stripped and stained with beta actin antibody 1:4000 cell signaling ma usa .