#sen2geneID pmid senID geneID hgncID approvedSymbol matchString actualString startPos score flankingText matchCodeID tag SciMinerVersion SciMinerMethod inExClude inExCludeCond phenotypeOnly conflictCode hgncIDbyNR NRText editTag editUser oldGeneID oldHgncID oldApprovedSymbol oldInExClude oldInExCludeCond 302977 1853774 437050 20996 11179 SOD1 ALS ALS 2 0.0 Autoimmunity and ALS a comparison of animal models of immune-mediated motor neuron destruction 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00105796358040523<>ScoreDetail__5468|IGFALS|0__11179|SOD1|0.00105796358040523__ 0 0 0 0 0 302978 1853774 437050 20996 11179 SOD1 ALS ALS 15 0.0 of animal models of immune-mediated motor neuron destruction and human ALS 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00105796358040523<>ScoreDetail__5468|IGFALS|0__11179|SOD1|0.00105796358040523__ 0 0 0 0 0 303408 2263315 438324 20996 11179 SOD1 ALS ALS 20 0.0 a role in the pathogenesis of amyotrophic lateral sclerosis (ALS), ALS the cellular composition of the spinal cord inflammatory infiltrate was 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000967484540195492<>ScoreDetail__5468|IGFALS|0.00016220600162206__11179|SOD1|0.000967484540195492__ 0 0 0 0 0 303409 2263315 438324 20996 11179 SOD1 ALS ALS 37 0.0 cord inflammatory infiltrate was analysed in eight cases of sporadic ALS by a panel of monoclonal antibodies 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000967484540195492<>ScoreDetail__5468|IGFALS|0.00016220600162206__11179|SOD1|0.000967484540195492__ 0 0 0 0 0 303411 2263315 438327 20996 11179 SOD1 ALS ALS 3 0.0 Compared to controls ALS specimens exhibited an increase in major histocompatibility complex (MHC) MHC 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000967484540195492<>ScoreDetail__5468|IGFALS|0.00016220600162206__11179|SOD1|0.000967484540195492__ 0 0 0 0 0 303412 2263315 438330 20996 11179 SOD1 ALS ALS 15 0.0 autoimmune process or infectious agent may play a role in ALS 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000967484540195492<>ScoreDetail__5468|IGFALS|0.00016220600162206__11179|SOD1|0.000967484540195492__ 0 0 0 0 0 305218 3719465 443416 20996 11179 SOD1 ALS ALS 15 0.0 with clinical and pathological resemblance to amyotrophic lateral sclerosis (ALS) ALS in a woman who was severely bitten on the ankle 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000712567808872135<>ScoreDetail__5468|IGFALS|0.000413166230546757__11179|SOD1|0.000712567808872135__ 0 0 0 0 0 305219 3719465 443418 20996 11179 SOD1 ALS ALS 9 0.0 A number of unusual features that are uncharacteristic of ALS were found that included a markedly elevated antinuclear antibody titre 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000712567808872135<>ScoreDetail__5468|IGFALS|0.000413166230546757__11179|SOD1|0.000712567808872135__ 0 0 0 0 0 305220 3719465 443419 20996 11179 SOD1 ALS ALS 16 0.0 anterior horn cells and pyramidal degeneration that are characteristic of ALS but an extraordinary finding was the presence of transmural granulomatous 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000712567808872135<>ScoreDetail__5468|IGFALS|0.000413166230546757__11179|SOD1|0.000712567808872135__ 0 0 0 0 0 305242 3772394 443573 3893 1682 CD47 IAP IAP 6 0.0 Significant increase in immunosuppressive acidic protein (IAP) IAP in serum of patients with multiple sclerosis and other inflammatory 1 JUMiner_v2.2 1 0 0 2 5329 TotalCon:4<>1682|CD47|961|Complete__5329|IAPP|3375|Complete__28880|MAGT1|84061|Complete__437|ALPI|248|Complete__<>AvaiableGeneRif=4<>BEST:5329|IAPP|0.000490780818649671<>ScoreDetail__437|ALPI|0.000436800436800437__1682|CD47|0.000449349104605828__5329|IAPP|0.000490780818649671__28880|MAGT1|0.000235017626321974__ 0 0 0 0 0 305243 3772394 443574 3893 1682 CD47 IAP IAP 0 0.0 IAP a type of alpha 1-acid glycoprotein is mainly produced by 1 JUMiner_v2.2 1 0 0 2 5329 TotalCon:4<>1682|CD47|961|Complete__5329|IAPP|3375|Complete__28880|MAGT1|84061|Complete__437|ALPI|248|Complete__<>AvaiableGeneRif=4<>BEST:5329|IAPP|0.000490780818649671<>ScoreDetail__437|ALPI|0.000436800436800437__1682|CD47|0.000449349104605828__5329|IAPP|0.000490780818649671__28880|MAGT1|0.000235017626321974__ 0 0 0 0 0 305244 3772394 443575 3893 1682 CD47 IAP IAP 6 0.0 We assayed the serum levels of IAP by a single radial immunodiffusion method 1 JUMiner_v2.2 1 0 0 2 5329 TotalCon:4<>1682|CD47|961|Complete__5329|IAPP|3375|Complete__28880|MAGT1|84061|Complete__437|ALPI|248|Complete__<>AvaiableGeneRif=4<>BEST:5329|IAPP|0.000490780818649671<>ScoreDetail__437|ALPI|0.000436800436800437__1682|CD47|0.000449349104605828__5329|IAPP|0.000490780818649671__28880|MAGT1|0.000235017626321974__ 0 0 0 0 0 305245 3772394 443576 3893 1682 CD47 IAP IAP 4 0.0 The normal level of IAP is below 500 micrograms/ml micrograms ml (385 385 -73 . 1 JUMiner_v2.2 1 0 0 2 5329 TotalCon:4<>1682|CD47|961|Complete__5329|IAPP|3375|Complete__28880|MAGT1|84061|Complete__437|ALPI|248|Complete__<>AvaiableGeneRif=4<>BEST:5329|IAPP|0.000490780818649671<>ScoreDetail__437|ALPI|0.000436800436800437__1682|CD47|0.000449349104605828__5329|IAPP|0.000490780818649671__28880|MAGT1|0.000235017626321974__ 0 0 0 0 0 305246 3772394 443577 3893 1682 CD47 IAP IAP 5 0.0 In multiple sclerosis patients however IAP increased during exacerbation (630 630 -191 and decreased during the 1 JUMiner_v2.2 1 0 0 2 5329 TotalCon:4<>1682|CD47|961|Complete__5329|IAPP|3375|Complete__28880|MAGT1|84061|Complete__437|ALPI|248|Complete__<>AvaiableGeneRif=4<>BEST:5329|IAPP|0.000490780818649671<>ScoreDetail__437|ALPI|0.000436800436800437__1682|CD47|0.000449349104605828__5329|IAPP|0.000490780818649671__28880|MAGT1|0.000235017626321974__ 0 0 0 0 0 305247 3772394 443578 3893 1682 CD47 IAP IAP 12 0.0 of patients with neuro-Behcet's disease also had high levels of IAP correlating well with disease activity 1 JUMiner_v2.2 1 0 0 2 5329 TotalCon:4<>1682|CD47|961|Complete__5329|IAPP|3375|Complete__28880|MAGT1|84061|Complete__437|ALPI|248|Complete__<>AvaiableGeneRif=4<>BEST:5329|IAPP|0.000490780818649671<>ScoreDetail__437|ALPI|0.000436800436800437__1682|CD47|0.000449349104605828__5329|IAPP|0.000490780818649671__28880|MAGT1|0.000235017626321974__ 0 0 0 0 0 305248 3772394 443579 3893 1682 CD47 IAP IAP 10 0.0 In some patients with Guillain-Barre syndrome or Miller Fisher syndrome IAP increased during the acute phase 1 JUMiner_v2.2 1 0 0 2 5329 TotalCon:4<>1682|CD47|961|Complete__5329|IAPP|3375|Complete__28880|MAGT1|84061|Complete__437|ALPI|248|Complete__<>AvaiableGeneRif=4<>BEST:5329|IAPP|0.000490780818649671<>ScoreDetail__437|ALPI|0.000436800436800437__1682|CD47|0.000449349104605828__5329|IAPP|0.000490780818649671__28880|MAGT1|0.000235017626321974__ 0 0 0 0 0 305249 3772394 443580 3893 1682 CD47 IAP IAP 6 0.0 In patients with herpes simplex encephalitis IAP levels remained abnormally high for more than 60 days after 1 JUMiner_v2.2 1 0 0 2 5329 TotalCon:4<>1682|CD47|961|Complete__5329|IAPP|3375|Complete__28880|MAGT1|84061|Complete__437|ALPI|248|Complete__<>AvaiableGeneRif=4<>BEST:5329|IAPP|0.000490780818649671<>ScoreDetail__437|ALPI|0.000436800436800437__1682|CD47|0.000449349104605828__5329|IAPP|0.000490780818649671__28880|MAGT1|0.000235017626321974__ 0 0 0 0 0 305250 3772394 443581 3893 1682 CD47 IAP IAP 4 0.0 The mean value of IAP in patients with amyotrophic lateral sclerosis did not differ from 1 JUMiner_v2.2 1 0 0 2 5329 TotalCon:4<>1682|CD47|961|Complete__5329|IAPP|3375|Complete__28880|MAGT1|84061|Complete__437|ALPI|248|Complete__<>AvaiableGeneRif=4<>BEST:5329|IAPP|0.000490780818649671<>ScoreDetail__437|ALPI|0.000436800436800437__1682|CD47|0.000449349104605828__5329|IAPP|0.000490780818649671__28880|MAGT1|0.000235017626321974__ 0 0 0 0 0 305251 3772394 443582 3893 1682 CD47 IAP IAP 3 0.0 An increase in IAP in the serum of patients seems to reflect the activity 1 JUMiner_v2.2 1 0 0 2 5329 TotalCon:4<>1682|CD47|961|Complete__5329|IAPP|3375|Complete__28880|MAGT1|84061|Complete__437|ALPI|248|Complete__<>AvaiableGeneRif=4<>BEST:5329|IAPP|0.000490780818649671<>ScoreDetail__437|ALPI|0.000436800436800437__1682|CD47|0.000449349104605828__5329|IAPP|0.000490780818649671__28880|MAGT1|0.000235017626321974__ 0 0 0 0 0 298691 7783760 427455 3930 7203 CD200 MRC MRC 12 0.0 side of these patients 26 movements were graded by the MRC scale and 20 muscles were assessed by CT imaging 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 299695 7836946 429576 11629 6493 LAMC2 CSF CSF 14 0.0 (IL-10) IL-10 was investigated in 120 paired cerebrospinal fluid (CSF) CSF and serum specimens from patients with various inflammatory and non-inflammatory 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 299698 7836946 429577 11629 6493 LAMC2 CSF CSF 14 0.0 in the sera but detectable levels were found in the CSF from patients with acute viral ("aseptic") aseptic meningitis but only 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 299699 7836946 429577 11629 6493 LAMC2 CSF CSF 66 0.0 encephalomeningeal sarcoidosis (in in whom IL-10 was demonstrated in all CSF collected over a period of 6-months 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 299701 7836946 429578 11629 6493 LAMC2 CSF CSF 12 0.0 infections inflammations IL-10 seems to be continuously produced within the CSF 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 297548 8737921 424888 20996 11179 SOD1 ALS ALS 3 0.0 Amyotrophic lateral sclerosis (ALS) ALS resembles the spongiform encephalopathies in its dual pattern of inherited 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000975314771371629<>ScoreDetail__5468|IGFALS|0.000301346012187772__11179|SOD1|0.000975314771371629__ 0 0 0 0 0 297549 8737921 424890 20996 11179 SOD1 ALS ALS 22 0.0 fresh-frozen within three hours of death from a case of ALS or a control case 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000975314771371629<>ScoreDetail__5468|IGFALS|0.000301346012187772__11179|SOD1|0.000975314771371629__ 0 0 0 0 0 297550 8737921 424896 20996 11179 SOD1 ALS ALS 12 0.0 of our carefully-controlled experiment suggest that it is unlikely that ALS is caused by a scrapie-like agent capable of transmission to 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000975314771371629<>ScoreDetail__5468|IGFALS|0.000301346012187772__11179|SOD1|0.000975314771371629__ 0 0 0 0 0 296747 9086508 423597 9947 5468 IGFALS ALS ALS 36 0.3 range of neurodegenerative disorders such as amyotrophic lateral sclerosis (ALS) ALS and Alzheimer's disease 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0005967342053518<>ScoreDetail__5468|IGFALS|0.000510948905109489__11179|SOD1|0.0005967342053518__ 0 0 0 0 0 292700 9270568 415805 20996 11179 SOD1 ALS ALS 8 0.0 Chamorros suffer from two neurologic syndromes known as ALS and the parkinsonism-dementia complex (PDC) PDC of Guam 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00053555337403539<>ScoreDetail__5468|IGFALS|0.000279665520038035__11179|SOD1|0.00053555337403539__ 0 0 0 0 0 292701 9270568 415805 16271 8759 PDC PDC PDC 13 0.0 neurologic syndromes known as ALS and the parkinsonism-dementia complex (PDC) PDC of Guam 1 JUMiner_v2.2 1 0 0 2 9153 TotalCon:2<>8759|PDC|5132|Complete__9153|PNKD|25953|Complete__<>AvaiableGeneRif=2<>BEST:9153|PNKD|0.00106923282544774<>ScoreDetail__8759|PDC|0__9153|PNKD|0.00106923282544774__ 0 0 0 0 0 292702 9270568 415810 16271 8759 PDC PDC PDC 5 0.0 Twelve cases were diagnosed as PDC known locally as bodig and three as ALS known locally 1 JUMiner_v2.2 1 0 0 2 9153 TotalCon:2<>8759|PDC|5132|Complete__9153|PNKD|25953|Complete__<>AvaiableGeneRif=2<>BEST:9153|PNKD|0.00106923282544774<>ScoreDetail__8759|PDC|0__9153|PNKD|0.00106923282544774__ 0 0 0 0 0 292703 9270568 415810 20996 11179 SOD1 ALS ALS 13 0.0 diagnosed as PDC known locally as bodig and three as ALS known locally as lytico. 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00053555337403539<>ScoreDetail__5468|IGFALS|0.000279665520038035__11179|SOD1|0.00053555337403539__ 0 0 0 0 0 288340 9562310 408233 11629 6493 LAMC2 CSF CSF 7 1.0 We assayed IL-6 in 105 cerebrospinal fluid (CSF) CSF samples from patients with ALS MS HTLV-1 associated myelopathy (HAM), 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288341 9562310 408233 9947 5468 IGFALS ALS ALS 12 0.3 in 105 cerebrospinal fluid (CSF) CSF samples from patients with ALS MS HTLV-1 associated myelopathy (HAM), HAM and controls 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288344 9562310 408235 9947 5468 IGFALS ALS ALS 7 0.3 The mean IL-6 in 27 patients with ALS was significantly higher than in 21 patients in the other 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288345 9562310 408237 11629 6493 LAMC2 CSF CSF 1 1.0 Overall CSF IL-6 correlated with protein concentration but not with percentage IgG 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288347 9562310 408238 11629 6493 LAMC2 CSF CSF 2 1.0 Patients with CSF oligoclonal bands were no more likely to have detectable IL-6 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288351 9562310 408240 9947 5468 IGFALS ALS ALS 4 0.3 The elevated IL-6 in ALS may reflect an ongoing humoral immune response or IL-6 may 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288354 9562310 408246 11629 6493 LAMC2 CSF CSF 2 1.0 Cerebrospinal fluid (CSF) CSF levels of IL-6 are consistently elevated in herpes simplex virus 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288357 9562310 408248 11629 6493 LAMC2 CSF CSF 7 1.0 IL-6 was detected in experimental allergic encephalomyelitis CSF ( Gijbels et al. 1990 and systemic lupus erythematosus with 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288360 9562310 408249 11629 6493 LAMC2 CSF CSF 12 1.0 IL-6 in non-inflammatory CNS disease prompted the present study of CSF in patients with amyotrophic lateral sclerosis (ALS) ALS 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288361 9562310 408249 9947 5468 IGFALS ALS ALS 19 0.3 study of CSF in patients with amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288363 9562310 408250 9947 5468 IGFALS ALS ALS 13 0.3 higher frequency of detection and higher levels of IL-6 in ALS than in the other neurological disease control group 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288364 9562310 408251 11629 6493 LAMC2 CSF CSF 8 1.0 In contrast there was no significant difference in CSF IL-6 in either MS or HAM patients compared to other 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288366 9562310 408251 11629 6493 LAMC2 CSF CSF 28 1.0 other neurological disease controls and there was no correlation of CSF immune parameters and IL-6 levels 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288368 9562310 408252 11629 6493 LAMC2 CSF CSF 8 1.0 These results are consistent with the hypothesis that CSF IL-6 in ALS has an non-immune origin occurring as a 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288370 9562310 408252 9947 5468 IGFALS ALS ALS 11 0.3 results are consistent with the hypothesis that CSF IL-6 in ALS has an non-immune origin occurring as a neurotrophic response to 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288371 9562310 408257 9947 5468 IGFALS ALS ALS 5 0.3 Diagnostic criteria used were for ALS ( Mulder 1982 MS ( Poser et al. 1983 and 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288372 9562310 408258 9947 5468 IGFALS ALS ALS 2 0.3 All 19 ALS patients from Japan had progressive weakness without significant sensory disturbance 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288373 9562310 408259 11629 6493 LAMC2 CSF CSF 1 1.0 Eight CSF ALS samples and two non-neurological disease controls were obtained from 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288374 9562310 408259 9947 5468 IGFALS ALS ALS 2 0.3 Eight CSF ALS samples and two non-neurological disease controls were obtained from the 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288375 9562310 408260 11629 6493 LAMC2 CSF CSF 28 1.0 HTLV-1 fluorescein antibody titers in serum (1:160-2560) 1 160-2560 and CSF (1:2-64) 1 2-64 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288376 9562310 408261 11629 6493 LAMC2 CSF CSF 1 1.0 Eleven CSF samples were from patients previously reported ( Ohbo et al. 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288377 9562310 408264 11629 6493 LAMC2 CSF CSF 0 1.0 CSF assays 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288382 9562310 408272 11629 6493 LAMC2 CSF CSF 31 1.0 assayed with MH6OBSF2 cells under the same conditions as the CSF samples 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288383 9562310 408273 11629 6493 LAMC2 CSF CSF 0 1.0 CSF samples were coded and assayed in a blinded fashion 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288384 9562310 408274 11629 6493 LAMC2 CSF CSF 0 1.0 CSF IL-6 values were expressed as log 1 0 pg/ml pg 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288391 9562310 408277 11629 6493 LAMC2 CSF CSF 6 1.0 IgG and albumin in sera and CSF were measured by electro-immunoassay ( Tibbling et al. 1977 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288392 9562310 408278 11629 6493 LAMC2 CSF CSF 7 1.0 IgG index was determined by the quotient CSF IgG/serum IgG serum IgG divided by the quotient CSF albumin/serum 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288393 9562310 408278 11629 6493 LAMC2 CSF CSF 14 1.0 quotient CSF IgG/serum IgG serum IgG divided by the quotient CSF albumin/serum albumin serum albumin 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288394 9562310 408283 11629 6493 LAMC2 CSF CSF 9 1.0 The Student t -test was used for comparison of CSF white blood cell count protein IgG %IgG and IgG index 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288397 9562310 408289 11629 6493 LAMC2 CSF CSF 3 1.0 Table 1 shows CSF of patients in the ALS MS HAM and OND groups 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288398 9562310 408289 9947 5468 IGFALS ALS ALS 8 0.3 Table 1 shows CSF of patients in the ALS MS HAM and OND groups 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288401 9562310 408294 9947 5468 IGFALS ALS ALS 11 0.3 2 shows IL-6 detection in 78% of 27 patients with ALS (median median log 1 0 IL-6 of 1.01 55% of 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288403 9562310 408295 11629 6493 LAMC2 CSF CSF 12 1.0 the non-parametric Wilcoxon rank-sum test showed a significant difference in CSF IL-6 between the ALS and OND group ( P =0.0075 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288405 9562310 408295 9947 5468 IGFALS ALS ALS 16 0.3 test showed a significant difference in CSF IL-6 between the ALS and OND group ( P =0.0075 but no significant difference 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288406 9562310 408296 9947 5468 IGFALS ALS ALS 1 0.3 The ALS MS and HAM groups all had statistically significant higher mean 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288408 9562310 408296 9947 5468 IGFALS ALS ALS 23 0.3 than the non-neurological disease control P _amp_#x3c 0.0001 for the ALS group P =0.03 for the MS group and P =0.03 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288409 9562310 408297 11629 6493 LAMC2 CSF CSF 2 1.0 The greatest CSF IL-6 level in the ALS group (log log 1 0 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288411 9562310 408297 9947 5468 IGFALS ALS ALS 7 0.3 The greatest CSF IL-6 level in the ALS group (log log 1 0 IL-6 of 2.55 was a 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288413 9562310 408298 9947 5468 IGFALS ALS ALS 14 0.3 is arbitrarily omitted the Wilcoxon rank-sum test P value for ALS vs OND changes very little from P =0.0075 to 0.0118 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288416 9562310 408301 11629 6493 LAMC2 CSF CSF 10 1.0 The results in Fig 2 show no significant difference in CSF IL-6 levels with 7 of 12 patients in relapse having 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288419 9562310 408303 11629 6493 LAMC2 CSF CSF 4 1.0 Fig 3 summarizes the CSF results 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288420 9562310 408304 11629 6493 LAMC2 CSF CSF 6 1.0 Oligoclonal bands were present in the CSF only during the relapses and there was an increase in 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288421 9562310 408305 11629 6493 LAMC2 CSF CSF 2 1.0 Despite these CSF changes consistent with fluctuating immune-mediated activity in the CNS the 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288422 9562310 408305 11629 6493 LAMC2 CSF CSF 13 1.0 changes consistent with fluctuating immune-mediated activity in the CNS the CSF IL-6 levels remained at undetectable levels in all four spinal 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288424 9562310 408306 11629 6493 LAMC2 CSF CSF 6 1.0 To evaluate further any correlation of CSF IL-6 with the extent of immune-mediated activity in the CNS 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288426 9562310 408306 11629 6493 LAMC2 CSF CSF 17 1.0 IL-6 with the extent of immune-mediated activity in the CNS CSF parameters were compared in patients with and without detectable IL-6 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288429 9562310 408308 9947 5468 IGFALS ALS ALS 8 0.3 Similarly the percent IgG was higher in the ALS group with detectable IL-6 but not in the combined patient 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288431 9562310 408309 11629 6493 LAMC2 CSF CSF 6 1.0 Table 3 summarizes correlation studies of CSF parameters combining data from all four neurological disease groups (ALS, 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288432 9562310 408309 9947 5468 IGFALS ALS ALS 16 0.3 parameters combining data from all four neurological disease groups (ALS, ALS MS HAM and OND 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288433 9562310 408310 11629 6493 LAMC2 CSF CSF 2 1.0 Only total CSF protein was significantly higher in patients with detectable IL-6 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288435 9562310 408311 11629 6493 LAMC2 CSF CSF 7 1.0 As shown in Table 3 mean CSF protein in patients with detectable IL-6 was 49.0_amp_#xb1 3.8 compared 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288438 9562310 408312 11629 6493 LAMC2 CSF CSF 3 1.0 Fig 4 shows CSF IL-6 levels in 35 patients with MS or HAM who 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288440 9562310 408312 11629 6493 LAMC2 CSF CSF 20 1.0 MS or HAM who had either oligoclonal bands in the CSF (14 14 patients or did not have oligoclonal bands (21 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288443 9562310 408316 11629 6493 LAMC2 CSF CSF 9 1.0 We found a modest but statistically significant elevation of CSF IL-6 in ALS patients ( Fig 1 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288445 9562310 408316 9947 5468 IGFALS ALS ALS 12 0.3 a modest but statistically significant elevation of CSF IL-6 in ALS patients ( Fig 1 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288446 9562310 408317 9947 5468 IGFALS ALS ALS 13 0.3 using this same assay technique found no difference between 15 ALS patient and 20 controls with psychiatric or neurodegenerative disease ( 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288447 9562310 408318 9947 5468 IGFALS ALS ALS 8 0.3 In comparing these studies a similar percentage of ALS patients had undetectable CSF IL-6 (6/27 6 27 versus 2/15); 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288448 9562310 408318 11629 6493 LAMC2 CSF CSF 12 1.0 these studies a similar percentage of ALS patients had undetectable CSF IL-6 (6/27 6 27 versus 2/15); 2 15 but 37% 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288452 9562310 408319 9947 5468 IGFALS ALS ALS 4 0.3 The IL-6 levels in ALS CSF (less less than 0.96 log 10 pg/ml) pg ml 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288453 9562310 408319 11629 6493 LAMC2 CSF CSF 5 1.0 The IL-6 levels in ALS CSF (less less than 0.96 log 10 pg/ml) pg ml were 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288454 9562310 408320 3890 11935 CD40LG IGM IgM 4 0.3 We did not measure IgM antibodies to GM1 or GDla gangliosides 14 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288455 9562310 408321 9947 5468 IGFALS ALS ALS 16 0.3 the serum of up to 78% of patients with classical ALS ( Pestronk et al. 1989 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288456 9562310 408322 9947 5468 IGFALS ALS ALS 13 0.3 no data to incriminate antiganglioside antibodies in the pathogenesis of ALS and empiric immunosuppressive treatment of patients with motor neuron syndromes 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288458 9562310 408323 9947 5468 IGFALS ALS ALS 20 0.3 to an ongoing humoral immune response in some patients with ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288460 9562310 408324 9947 5468 IGFALS ALS ALS 6 0.3 Serum IL-6 was not measured in ALS but prior studies have shown that IL-6 can concentrate in 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288462 9562310 408324 11629 6493 LAMC2 CSF CSF 18 1.0 prior studies have shown that IL-6 can concentrate in the CSF compartment (e.g e.g during active CNS systemic lupus erythematosus ( 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288466 9562310 408326 11629 6493 LAMC2 CSF CSF 17 1.0 not find a statistically significant elevation of IL-6 in MS CSF 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288469 9562310 408330 11629 6493 LAMC2 CSF CSF 36 1.0 1990 and Maimone et al. 1991 to correlate IL-6 and CSF parameters of immune mediated disease including percentage IgG and elevated 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288472 9562310 408331 11629 6493 LAMC2 CSF CSF 31 1.0 or (II) II detection of IL-6 is unreliable in the CSF of immune-mediated CNS parenchymal disease (because because of instability or 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288474 9562310 408331 11629 6493 LAMC2 CSF CSF 52 1.0 IL-6 from brain in these disease does not enter the CSF compartment 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288476 9562310 408332 9947 5468 IGFALS ALS ALS 8 0.3 It is possible that the IL-6 elevation in ALS is of non-immune origin 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288480 9562310 408335 9947 5468 IGFALS ALS ALS 13 0.3 IL-6 may be produced by astrocytes or microglial cells in ALS as a non-specific response to degeneration of motor neurons or 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288482 9562310 408337 9947 5468 IGFALS ALS ALS 7 0.3 Future studies of multiple cytokine expression in ALS and other neurological disease would be helpful to distinguish an 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288484 9562310 408339 11629 6493 LAMC2 CSF CSF 0 1.0 CSF IL-6 levels in ALS MS (including including relapsing remitting and 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288486 9562310 408339 9947 5468 IGFALS ALS ALS 4 0.3 CSF IL-6 levels in ALS MS (including including relapsing remitting and stable disease HAM OND 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288487 9562310 408340 11629 6493 LAMC2 CSF CSF 1 1.0 Eleven CSF samples were from patients previously reported ( Ohbo et al. 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288488 9562310 408341 9947 5468 IGFALS ALS ALS 6 0.3 Statistical test results include the following ALS vs OND P =0.0075 ALS vs control P _amp_#x3c 0.001 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288489 9562310 408341 9947 5468 IGFALS ALS ALS 11 0.3 test results include the following ALS vs OND P =0.0075 ALS vs control P _amp_#x3c 0.001 MS vs OND and MS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000688289727488252<>ScoreDetail__5468|IGFALS|0.000688289727488252__11179|SOD1|0.000572368485874859__ 0 0 0 0 0 288490 9562310 408343 11629 6493 LAMC2 CSF CSF 0 1.0 CSF IL-6 levels in MS patients with either relapsing or remitting/stable 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288492 9562310 408346 11629 6493 LAMC2 CSF CSF 0 1.0 CSF parameters in an MS patient followed for 15 months with 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288493 9562310 408348 11629 6493 LAMC2 CSF CSF 0 1.0 CSF IL-6 levels in MS or HAM patients that either have 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 288495 9562310 408348 11629 6493 LAMC2 CSF CSF 21 1.0 or do not have (OCB_amp_#x2212;) OCB_amp_#x2212 oligoclonal bands in the CSF 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 282632 9762518 398387 11629 6493 LAMC2 CSF CSF 34 0.0 cytokines and their receptors in brain tissue and/or and or CSF (for for review see McGeer and McGeer 1997b 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 282639 9769023 398468 20996 11179 SOD1 ALS ALS 31 0.0 AD Parkinson's disease (PD), PD and amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000692485252628879<>ScoreDetail__5468|IGFALS|0.000190415741034592__11179|SOD1|0.000692485252628879__ 0 0 0 0 0 276178 10225668 387926 11629 6493 LAMC2 CSF CSF 5 0.0 We determined the cerebrospinal fluid (CSF) CSF levels of adenosine a mediator of cerebral blood flow regulation 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 276179 10225668 387927 20996 11179 SOD1 ALS ALS 27 0.0 acute meningitis (n=10, n=10 p_lt_0.0001 or amyotrophic lateral sclerosis (ALS, ALS n=12 p_lt_0.05 (Mann-Whitney Mann-Whitney U-test 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000888270961263662<>ScoreDetail__5468|IGFALS|0.000888270961263662__11179|SOD1|0.000716504435406718__ 0 0 0 0 0 276180 10225668 387928 22104 11785 THBS1 TSP TSP 19 0.0 virus type I-associated myelopathy/tropical myelopathy tropical spastic paraparesis (HAM/TSP, HAM TSP p_lt_0.0001 acute meningitis (p_lt_0.0001), p_lt_0.0001 ALS (p_lt_0.05) p_lt_0.05 (Mann-Whitney Mann-Whitney 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 276181 10225668 387928 20996 11179 SOD1 ALS ALS 24 0.0 spastic paraparesis (HAM/TSP, HAM TSP p_lt_0.0001 acute meningitis (p_lt_0.0001), p_lt_0.0001 ALS (p_lt_0.05) p_lt_0.05 (Mann-Whitney Mann-Whitney U-test or acute-stage cerebral infarction (p_lt_0.005, 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000888270961263662<>ScoreDetail__5468|IGFALS|0.000888270961263662__11179|SOD1|0.000716504435406718__ 0 0 0 0 0 276182 10225668 387929 22104 11785 THBS1 TSP TSP 5 0.0 In the analysis of 41 HAM/TSP HAM TSP patients the neopterin levels were significantly correlated with the cell 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 276183 10225668 387929 11629 6493 LAMC2 CSF CSF 22 0.0 correlated with the cell number and glucose levels in the CSF and were a sensitive marker of inflammation 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 276184 10225668 387930 22104 11785 THBS1 TSP TSP 3 0.0 Several of the HAM/TSP HAM TSP patients with increased adenosine levels were probably complicated with other 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 276185 10225668 387931 22104 11785 THBS1 TSP TSP 6 0.0 The increased neopterin levels in the HAM/TSP HAM TSP group persisted suggesting that the mononuclear cellular infiltration remained for 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 275659 10525172 386981 20996 11179 SOD1 ALS ALS 29 1.4 (PD), PD multiple sclerosis (MS), MS amyotrophic lateral sclerosis (ALS) ALS and the parkinsonism dementia complex of Guam 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000775018816394618<>ScoreDetail__5468|IGFALS|0.000377891366176734__11179|SOD1|0.000775018816394618__ 0 0 0 0 0 275661 10525172 386988 20996 11179 SOD1 ALS ALS 35 1.4 (PD), PD multiple sclerosis (MS), MS amyotrophic lateral sclerosis (ALS) ALS and the parkinsonism dementia complex of Guam is consistent with 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000775018816394618<>ScoreDetail__5468|IGFALS|0.000377891366176734__11179|SOD1|0.000775018816394618__ 0 0 0 0 0 275675 10525172 387024 20996 11179 SOD1 ALS ALS 20 1.4 neurotransmission 61 and mitochondrial dysfunction including focal trauma epileptic seizure ALS PD and other neurodegenerative diseases the excessive intracellular calcium accumulation 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000775018816394618<>ScoreDetail__5468|IGFALS|0.000377891366176734__11179|SOD1|0.000775018816394618__ 0 0 0 0 0 275699 10525172 387073 20996 11179 SOD1 ALS ALS 14 1.4 suggested to contribute to tissue damage in AD PD MS ALS and the parkinsonism dementia complex of Guam 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000775018816394618<>ScoreDetail__5468|IGFALS|0.000377891366176734__11179|SOD1|0.000775018816394618__ 0 0 0 0 0 275701 10525172 387076 20996 11179 SOD1 ALS ALS 24 1.4 in SOD associated with the autosomal dominant inheritance of familial ALS could both double the steady state concentration of O 2 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000775018816394618<>ScoreDetail__5468|IGFALS|0.000377891366176734__11179|SOD1|0.000775018816394618__ 0 0 0 0 0 275704 10525172 387078 20996 11179 SOD1 ALS ALS-associated 18 1.4 strengthened by the demonstration that the zinc affinity of four ALS-associated SOD mutants was decreased up to 30-fold compared with wild-type 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000775018816394618<>ScoreDetail__5468|IGFALS|0.000377891366176734__11179|SOD1|0.000775018816394618__ 0 0 0 0 0 275710 10525172 387080 20996 11179 SOD1 ALS ALS 26 1.4 al 13 14 detected more nitration in motor neurons of ALS than in controls 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000775018816394618<>ScoreDetail__5468|IGFALS|0.000377891366176734__11179|SOD1|0.000775018816394618__ 0 0 0 0 0 275711 10525172 387081 20996 11179 SOD1 ALS ALS 19 1.4 tyrosine residues in motor neurons of the spinal cord in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000775018816394618<>ScoreDetail__5468|IGFALS|0.000377891366176734__11179|SOD1|0.000775018816394618__ 0 0 0 0 0 275713 10525172 387082 20996 11179 SOD1 ALS ALS 26 1.4 quantitative modifications in the nitrotyrosine-immunoreactivity of NF-L isolated from sporadic ALS cervical spinal cord tissue as compared with age-matched non-ALS controls 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000775018816394618<>ScoreDetail__5468|IGFALS|0.000377891366176734__11179|SOD1|0.000775018816394618__ 0 0 0 0 0 275717 10525172 387089 10436 5991 IL1A IL1 IL1-_amp_#x3b2 16 0.0 et al 71 reported an overexpression of the proinflammatory cytokines IL1-_amp_#x3b2 IL2 IFN_amp_#x3b3 and TNF and a defective production of the 11 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 275718 10525172 387089 10452 6001 IL2 IL2 IL2 17 0.0 al 71 reported an overexpression of the proinflammatory cytokines IL1-_amp_#x3b2 IL2 IFN_amp_#x3b3 and TNF and a defective production of the anti-inflammatory 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 275719 10525172 387102 6054 2983 DNTT TDT TdT 31 0.0 strand breaking (detected detected by the deoxynucleotidyl transferase histochemical technique TdT and tyrosine-nitrated proteins (detected detected by immunocytochemistry using antibodies direct 14 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 275720 10525172 387103 6054 2983 DNTT TDT TdT-labeled 6 0.0 They demonstrated that the majority of TdT-labeled nuclei are associated with neurons exhibiting an up-regulation of nitrotyrosine 14 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 275722 10525172 387123 20996 11179 SOD1 ALS ALS 22 1.4 brain of patients with neurodegenerative disorders such as AD PD ALS and MS has led Mc Geer and Mc Geer 56 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000775018816394618<>ScoreDetail__5468|IGFALS|0.000377891366176734__11179|SOD1|0.000775018816394618__ 0 0 0 0 0 275735 10525172 387158 17461 9508 PSEN1 FAD FAD 28 0.3 substrates -arginine NADPH and O 2 and require five cofactors FAD FMN calmodulin (CaM), CaM tetrahydrobiopterin (BH BH 4 and heme 1 JUMiner_v2.2 1 2 nadph 0 2 3585 TotalCon:3<>1101|BRCA2|675|Complete__3585|FANCD2|2177|Complete__9508|PSEN1|5663|Complete__<>AvaiableGeneRif=3<>BEST:3585|FANCD2|0.000565392205550834<>ScoreDetail__1101|BRCA2|0.000324533567436429__9508|PSEN1|0.000517984626120048__3585|FANCD2|0.000565392205550834__ 0 0 0 0 0 252919 11173059 346554 13412 7214 MPHOSPH6 MPP MPP 11 0.0 converted by monoamino oxidase-B into the methyl phenylpyridinium ion (MPP MPP which is actively taken up by dopaminergic neurons and concentrated 1 JUMiner_v2.2 1 0 0 2 7225 TotalCon:2<>7214|MPHOSPH6|10200|Complete__7225|MPZ|4359|Complete__<>AvaiableGeneRif=2<>BEST:7225|MPZ|0.00108555412199137<>ScoreDetail__7214|MPHOSPH6|0.000567789078700504__7225|MPZ|0.00108555412199137__ 0 0 0 0 0 252920 11173059 346555 13412 7214 MPHOSPH6 MPP MPP 0 0.0 MPP inhibits mitochondrial complex I reductase resulting in a decrease in 1 JUMiner_v2.2 1 0 0 2 7225 TotalCon:2<>7214|MPHOSPH6|10200|Complete__7225|MPZ|4359|Complete__<>AvaiableGeneRif=2<>BEST:7225|MPZ|0.00108555412199137<>ScoreDetail__7214|MPHOSPH6|0.000567789078700504__7225|MPZ|0.00108555412199137__ 0 0 0 0 0 252921 11173059 346563 13744 7475 MT-TA TRNA tRNA 20 1.0 there to be a significant association between A4336G at the tRNA Glu gene and Parkinson's disease ( Tan et al. 2000 14 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 253416 11220737 347228 20996 11179 SOD1 ALS ALS 18 1.4 associated with a familial form of amyotrophic lateral sclerosis (ALS), ALS and their expression in transgenic mice produces an ALS-like syndrome 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00160441276767528<>ScoreDetail__5468|IGFALS|0.000785571667048542__11179|SOD1|0.00160441276767528__ 0 0 0 0 0 253417 11220737 347228 20996 11179 SOD1 ALS ALS-like 27 1.4 (ALS), ALS and their expression in transgenic mice produces an ALS-like syndrome 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00160441276767528<>ScoreDetail__5468|IGFALS|0.000785571667048542__11179|SOD1|0.00160441276767528__ 0 0 0 0 0 253418 11220737 347229 20996 11179 SOD1 ALS ALS 18 1.4 in the progression and propagation of the neurodegenerative process in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00160441276767528<>ScoreDetail__5468|IGFALS|0.000785571667048542__11179|SOD1|0.00160441276767528__ 0 0 0 0 0 253427 11220737 347234 20996 11179 SOD1 ALS ALS 16 1.4 is dramatically increased in postmortem spinal cord samples from sporadic ALS patients 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00160441276767528<>ScoreDetail__5468|IGFALS|0.000785571667048542__11179|SOD1|0.00160441276767528__ 0 0 0 0 0 253429 11220737 347235 20996 11179 SOD1 ALS ALS 15 1.4 through its pivotal role in inflammation is instrumental in the ALS neurodegenerative process and that Cox-2 inhibition may be a valuable 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00160441276767528<>ScoreDetail__5468|IGFALS|0.000785571667048542__11179|SOD1|0.00160441276767528__ 0 0 0 0 0 253431 11220737 347235 20996 11179 SOD1 ALS ALS 32 1.4 may be a valuable therapeutic avenue for the treatment of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00160441276767528<>ScoreDetail__5468|IGFALS|0.000785571667048542__11179|SOD1|0.00160441276767528__ 0 0 0 0 0 247362 11458198 336764 20996 11179 SOD1 ALS ALS 28 0.0 MS rheumatoid arthritis (RA) RA and amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000792414116827246<>ScoreDetail__5468|IGFALS|0.000516457788183446__11179|SOD1|0.000792414116827246__ 0 0 0 0 0 247363 11458198 336765 9590 5164 HPSE HPA HPA 11 0.0 discuss the role of inflammation-induced changes in the hypothalamus-pituitary-adrenal (HPA) HPA axis as a possible explanation of fatigue depression and other 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 234256 11796754 317535 20996 11179 SOD1 ALS ALS 1 1.7 Thus ALS has paralleled other neurodegenerative disorders such as Alzheimer's and prion 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00221178824730383<>ScoreDetail__5468|IGFALS|0.0005781600057816__11179|SOD1|0.00221178824730383__ 0 0 0 0 0 235273 11847479 319128 20996 11179 SOD1 ALS ALS 28 0.9 has been reported in patients with amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000729766818348876<>ScoreDetail__5468|IGFALS|0.000714876965911656__11179|SOD1|0.000729766818348876__ 0 0 0 0 0 235274 11847479 319129 20996 11179 SOD1 ALS ALS 31 0.9 patients to ask whether anti-TNF therapy might be beneficial in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000729766818348876<>ScoreDetail__5468|IGFALS|0.000714876965911656__11179|SOD1|0.000729766818348876__ 0 0 0 0 0 235277 11847479 319132 20996 11179 SOD1 ALS ALS 5 0.9 Studies with animal models of ALS are not sufficient to show whether TNF has a pathogenic 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000729766818348876<>ScoreDetail__5468|IGFALS|0.000714876965911656__11179|SOD1|0.000729766818348876__ 0 0 0 0 0 226652 12043837 303674 18230 17440 RFWD2 COP1 Cop-1 7 0.0 Candidate vaccines were the safe synthetic copolymer Cop-1 known to cross-react with self-antigens or altered myelin-derived peptides 11 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 227518 12060810 305721 20996 11179 SOD1 ALS ALS 18 1.7 of selective motor neuron death during amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00161246018171857<>ScoreDetail__5468|IGFALS|0.000561482313307131__11179|SOD1|0.00161246018171857__ 0 0 0 0 0 227519 12060810 305722 20996 11179 SOD1 ALS ALS 23 1.7 this tetracycline derivative in the G93A mice model for familial ALS was tested 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00161246018171857<>ScoreDetail__5468|IGFALS|0.000561482313307131__11179|SOD1|0.00161246018171857__ 0 0 0 0 0 227520 12060810 305725 20996 11179 SOD1 ALS ALS 14 1.7 interference with immuno-inflammatory responses has a beneficial effect in the ALS mice model suggesting this to be a potential new strategy 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00161246018171857<>ScoreDetail__5468|IGFALS|0.000561482313307131__11179|SOD1|0.00161246018171857__ 0 0 0 0 0 227521 12060810 305725 20996 11179 SOD1 ALS ALS 27 1.7 suggesting this to be a potential new strategy to treat ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00161246018171857<>ScoreDetail__5468|IGFALS|0.000561482313307131__11179|SOD1|0.00161246018171857__ 0 0 0 0 0 227525 12060810 305732 20996 11179 SOD1 ALS ALS 24 1.7 in the motor neuron degeneration during amyotrophic lateral sclerosis (ALS) ALS _amp_#91 7 _amp_#93 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00161246018171857<>ScoreDetail__5468|IGFALS|0.000561482313307131__11179|SOD1|0.00161246018171857__ 0 0 0 0 0 227526 12060810 305734 20996 11179 SOD1 ALS ALS 1 1.7 Familial ALS accounts for 10_amp_#37 of all cases and mutations of the 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00161246018171857<>ScoreDetail__5468|IGFALS|0.000561482313307131__11179|SOD1|0.00161246018171857__ 0 0 0 0 0 227529 12060810 305735 20996 11179 SOD1 ALS ALS 12 1.7 over-expressing the human SOD1 gene with a mutation identified in ALS patients develop an adult-onset progressive motor deterioration _amp_#91 8 _amp_#93 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00161246018171857<>ScoreDetail__5468|IGFALS|0.000561482313307131__11179|SOD1|0.00161246018171857__ 0 0 0 0 0 227530 12060810 305737 20996 11179 SOD1 ALS ALS 24 1.7 microglia in particular may contribute to the disease progression in ALS _amp_#91 9 10 _amp_#93 we tested the therapeutic efficacy of 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00161246018171857<>ScoreDetail__5468|IGFALS|0.000561482313307131__11179|SOD1|0.00161246018171857__ 0 0 0 0 0 227531 12060810 305737 20996 11179 SOD1 ALS ALS 41 1.7 therapeutic efficacy of minocycline on the G93A mice model for ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00161246018171857<>ScoreDetail__5468|IGFALS|0.000561482313307131__11179|SOD1|0.00161246018171857__ 0 0 0 0 0 227533 12060810 305738 22055 11764 TG TGN TgN 8 0.1 Transgenic mice with the G93A human SOD1 mutation TgN(SOD1-G93A)G1H, TgN SOD1-G93A G1H were obtained from The Jackson Laboratories (Bar Bar 6 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 227534 12060810 305759 20996 11179 SOD1 ALS ALS 10 1.7 In order to evaluate the potential benefit of minocycline in ALS G93A transgenic mice were treated from day 70 until death 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00161246018171857<>ScoreDetail__5468|IGFALS|0.000561482313307131__11179|SOD1|0.00161246018171857__ 0 0 0 0 0 227540 12060810 305781 20996 11179 SOD1 ALS ALS 18 1.7 microglial activation might actively contribute to the disease progression during ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00161246018171857<>ScoreDetail__5468|IGFALS|0.000561482313307131__11179|SOD1|0.00161246018171857__ 0 0 0 0 0 227541 12060810 305782 20996 11179 SOD1 ALS ALS 20 1.7 microglia both in patients _amp_#91 12 _amp_#93 and in mutant ALS mice _amp_#91 9 13 _amp_#93 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00161246018171857<>ScoreDetail__5468|IGFALS|0.000561482313307131__11179|SOD1|0.00161246018171857__ 0 0 0 0 0 227542 12060810 305793 6869 3518 EXTL3 RPR RPR 1 0.0 For RPR 119990 _amp_#91 21 _amp_#93 and riluzole _amp_#91 22 _amp_#93 the 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 227543 12060810 305795 20996 11179 SOD1 ALS ALS 18 1.7 and important protection in the transgenic mice model of familial ALS most likely by inhibition of the microglial activation that coincides 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00161246018171857<>ScoreDetail__5468|IGFALS|0.000561482313307131__11179|SOD1|0.00161246018171857__ 0 0 0 0 0 227544 12060810 305796 20996 11179 SOD1 ALS ALS 25 1.7 to test whether it could be an effective treatment for ALS patients 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00161246018171857<>ScoreDetail__5468|IGFALS|0.000561482313307131__11179|SOD1|0.00161246018171857__ 0 0 0 0 0 229347 12124437 309220 18741 10289 RPA1 RPA RPAs 4 0.0 Multiprobe ribonuclease protection assays (RPAs) RPAs were used to investigate expression of 36 different cytokines and 13 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 229358 12124437 309225 20996 11179 SOD1 ALS ALS 43 1.4 TNFalpha and its receptors may link inflammation to apoptosis in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00139476846555297<>ScoreDetail__5468|IGFALS|0.000546761803220427__11179|SOD1|0.00139476846555297__ 0 0 0 0 0 229973 12137643 310084 9947 5468 IGFALS ALS ALS 16 2.1 was change in disease progression as determined by the Appel ALS Rating Scale total score with 0.1 mg/kg/day mg kg day 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00199497735113948<>ScoreDetail__5468|IGFALS|0.00199497735113948__11179|SOD1|0.00112775227220435__ 0 0 0 0 0 223774 12194501 299400 20996 11179 SOD1 ALS ALS 32 1.4 disorders such as forms of familial amyotrophic lateral sclerosis (ALS) ALS and glutathione peroxidase-linked adolescent seizures Parkinson's disease and Alzheimer's dementia 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00111673933487219<>ScoreDetail__5468|IGFALS|0.000380170316301703__11179|SOD1|0.00111673933487219__ 0 0 0 0 0 223778 12194501 299403 20996 11179 SOD1 ALS ALS 28 1.4 the genetic SOD mutations observed in some familial cases of ALS are also discussed 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00111673933487219<>ScoreDetail__5468|IGFALS|0.000380170316301703__11179|SOD1|0.00111673933487219__ 0 0 0 0 0 224941 12270689 301344 20996 11179 SOD1 ALS ALS 11 1.7 currently no effective pharmacological treatment for amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00203055323719497<>ScoreDetail__5468|IGFALS|0.000443602048634916__11179|SOD1|0.00203055323719497__ 0 0 0 0 0 224942 12270689 301345 20996 11179 SOD1 ALS ALS 15 1.7 secondary inflammation and caspase activation may contribute to neurodegeneration in ALS we tested the effects of minocycline a second-generation tetracycline with 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00203055323719497<>ScoreDetail__5468|IGFALS|0.000443602048634916__11179|SOD1|0.00203055323719497__ 0 0 0 0 0 224944 12270689 301345 20996 11179 SOD1 ALS ALS 39 1.7 a mutant superoxide dismutase (SOD1(G37R)) SOD1 G37R linked to human ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00203055323719497<>ScoreDetail__5468|IGFALS|0.000443602048634916__11179|SOD1|0.00203055323719497__ 0 0 0 0 0 224947 12270689 301348 20996 11179 SOD1 ALS ALS 20 1.7 may represent a novel and effective drug for treatment of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00203055323719497<>ScoreDetail__5468|IGFALS|0.000443602048634916__11179|SOD1|0.00203055323719497__ 0 0 0 0 0 226013 12362410 302429 20996 11179 SOD1 ALS ALS 15 0.0 the brainstem and spinal cord of amyotrophic lateral sclerosis (ALS) ALS cases and in mouse models of the disease 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00103312875457412<>ScoreDetail__5468|IGFALS|0.000205613241492752__11179|SOD1|0.00103312875457412__ 0 0 0 0 0 226015 12362410 302432 20996 11179 SOD1 ALS ALS 10 0.0 Anti-inflammatory agents may have a role to play in treating ALS 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00103312875457412<>ScoreDetail__5468|IGFALS|0.000205613241492752__11179|SOD1|0.00103312875457412__ 0 0 0 0 0 226017 12362410 302433 20996 11179 SOD1 ALS ALS 12 0.0 a particularly attractive target because of its marked increase in ALS spinal cord 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00103312875457412<>ScoreDetail__5468|IGFALS|0.000205613241492752__11179|SOD1|0.00103312875457412__ 0 0 0 0 0 220318 12417341 294834 20996 11179 SOD1 ALS ALS 3 3.9 Amyotrophic lateral sclerosis (ALS) ALS is one of the most common neurodegenerative disorders characterized by 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0012197662335473<>ScoreDetail__5468|IGFALS|0.000411226482985504__11179|SOD1|0.0012197662335473__ 0 0 0 0 0 220319 12417341 294835 20996 11179 SOD1 ALS ALS 3 3.9 Approximately 10% of ALS is familial and 10_amp_#x2013 20% of these familial ALS (FALS) 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0012197662335473<>ScoreDetail__5468|IGFALS|0.000411226482985504__11179|SOD1|0.0012197662335473__ 0 0 0 0 0 220320 12417341 294835 20996 11179 SOD1 ALS ALS 11 3.9 of ALS is familial and 10_amp_#x2013 20% of these familial ALS (FALS) FALS cases are caused by missense mutations in the 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0012197662335473<>ScoreDetail__5468|IGFALS|0.000411226482985504__11179|SOD1|0.0012197662335473__ 0 0 0 0 0 220322 12417341 294835 20996 11179 SOD1 ALS ALS 36 3.9 SOD1 gene 1 while others are considered to be sporadic ALS (SALS) SALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0012197662335473<>ScoreDetail__5468|IGFALS|0.000411226482985504__11179|SOD1|0.0012197662335473__ 0 0 0 0 0 220323 12417341 294851 20996 11179 SOD1 ALS ALS 3 3.9 Diagnostic criteria for ALS were based on the El Escorial criteria outlined by the 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0012197662335473<>ScoreDetail__5468|IGFALS|0.000411226482985504__11179|SOD1|0.0012197662335473__ 0 0 0 0 0 220326 12417341 294867 20996 11179 SOD1 ALS ALS 28 3.9 cDNA fragments with an apparent difference in peak between the ALS spinal cord and control were chosen as candidate gene fragments 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0012197662335473<>ScoreDetail__5468|IGFALS|0.000411226482985504__11179|SOD1|0.0012197662335473__ 0 0 0 0 0 220327 12417341 294875 8278 4250 GGT1 GTG GTG 31 0.5 ml T7-oligo-dT primer (5_amp_#x2032;-TCT 5_amp_#x2032 -TCT AGT CGA CGG CCA GTG AAT TGT AAT ACG ACT CAC TAT AGG GCG T 1 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220328 12417341 294875 23798 12612 USP14 TGT TGT 33 0.6 primer (5_amp_#x2032;-TCT 5_amp_#x2032 -TCT AGT CGA CGG CCA GTG AAT TGT AAT ACG ACT CAC TAT AGG GCG T 21 -3_amp_#x2032 1 JUMiner_v2.2 1 2 35 0 1 0 TotalCon:2<>23797|QTRT1|81890|No_GeneRif__12612|USP14|9097|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 220329 12417341 294875 7572 17371 FHL5 ACT ACT 36 0.3 -TCT AGT CGA CGG CCA GTG AAT TGT AAT ACG ACT CAC TAT AGG GCG T 21 -3_amp_#x2032 at 42_amp_#xb0 C 1 JUMiner_v2.2 1 2 35 0 2 145 TotalCon:6<>24157|ACOT7|11332|Complete__17371|FHL5|9457|Complete__16|SERPINA3|12|Complete__17780|ACTBL2|345651|No_GeneRif__144|ACTG1|71|Complete__145|ACTG2|72|Complete__<>AvaiableGeneRif=5<>BEST:145|ACTG2|0.000895372811881351<>ScoreDetail__17371|FHL5|0.000809922710232795__145|ACTG2|0.000895372811881351__24157|ACOT7|0.000565426561631495__144|ACTG1|0.000314582224765653__16|SERPINA3|0.000578228402579135__ 0 0 0 0 0 220330 12417341 294875 20237 1421 SLC25A20 CAC CAC 37 0.3 AGT CGA CGG CCA GTG AAT TGT AAT ACG ACT CAC TAT AGG GCG T 21 -3_amp_#x2032 at 42_amp_#xb0 C for 1 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220331 12417341 294875 452 333 AGT AGT AGT 27 0.0 of 0.5 mg/ml mg ml T7-oligo-dT primer (5_amp_#x2032;-TCT 5_amp_#x2032 -TCT AGT CGA CGG CCA GTG AAT TGT AAT ACG ACT CAC 1 JUMiner_v2.2 1 0 0 2 341 TotalCon:2<>333|AGT|183|Complete__341|AGXT|189|Complete__<>AvaiableGeneRif=2<>BEST:341|AGXT|0.000452679490518535<>ScoreDetail__333|AGT|0.000350759529288421__341|AGXT|0.000452679490518535__ 0 0 0 0 0 220332 12417341 294875 4265 1885 CGA CGA CGA 28 0.0 0.5 mg/ml mg ml T7-oligo-dT primer (5_amp_#x2032;-TCT 5_amp_#x2032 -TCT AGT CGA CGG CCA GTG AAT TGT AAT ACG ACT CAC TAT 1 JUMiner_v2.2 1 0 0 2 1929 TotalCon:2<>1885|CGA|1081|Complete__1929|CHGA|1113|Complete__<>AvaiableGeneRif=2<>BEST:1929|CHGA|0.000418791508538899<>ScoreDetail__1885|CGA|0.00034398566484308__1929|CHGA|0.000418791508538899__ 0 0 0 0 0 220333 12417341 294875 7357 3604 FBN2 CCA CCA 30 0.2 mg ml T7-oligo-dT primer (5_amp_#x2032;-TCT 5_amp_#x2032 -TCT AGT CGA CGG CCA GTG AAT TGT AAT ACG ACT CAC TAT AGG GCG 5 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220334 12417341 294875 19697 8941 SERPINA1 AAT AAT 32 0.4 T7-oligo-dT primer (5_amp_#x2032;-TCT 5_amp_#x2032 -TCT AGT CGA CGG CCA GTG AAT TGT AAT ACG ACT CAC TAT AGG GCG T 21 5 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220335 12417341 294875 19697 8941 SERPINA1 AAT AAT 34 0.3 (5_amp_#x2032;-TCT 5_amp_#x2032 -TCT AGT CGA CGG CCA GTG AAT TGT AAT ACG ACT CAC TAT AGG GCG T 21 -3_amp_#x2032 at 6 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220336 12417341 294875 6069 23483 DOCK11 ACG ACG 35 0.4 5_amp_#x2032 -TCT AGT CGA CGG CCA GTG AAT TGT AAT ACG ACT CAC TAT AGG GCG T 21 -3_amp_#x2032 at 42_amp_#xb0 6 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220337 12417341 294875 21790 11573 TAT TAT TAT 38 0.3 CGA CGG CCA GTG AAT TGT AAT ACG ACT CAC TAT AGG GCG T 21 -3_amp_#x2032 at 42_amp_#xb0 C for 1 6 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220338 12417341 294875 8198 4191 GCG GCG GCG 40 0.0 CCA GTG AAT TGT AAT ACG ACT CAC TAT AGG GCG T 21 -3_amp_#x2032 at 42_amp_#xb0 C for 1 h in 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220339 12417341 294878 20218 10979 SLC25A1 CTP CTP 35 0.3 T7 buffer 1.5 _amp_#x3bc l each of 100 mM ATP CTP GTP and UTP 2 _amp_#x3bc l 0.1 M DTT and 1 JUMiner_v2.2 1 2 ctp 0 0 0 0 0 0 0 0 220340 12417341 294878 13812 32159 MTG1 GTP GTP 36 0.2 buffer 1.5 _amp_#x3bc l each of 100 mM ATP CTP GTP and UTP 2 _amp_#x3bc l 0.1 M DTT and 2 5 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 220341 12417341 294881 19573 10691 SDS SDS SDS 26 0.0 solution of 2_amp_#xd7 Denhardt_amp_#x2019 s solution 4_amp_#xd7 SSC and 0.2% SDS 1 JUMiner_v2.2 1 0 0 2 19440 TotalCon:2<>10691|SDS|10993|Complete__19440|SBDS|51119|Complete__<>AvaiableGeneRif=2<>BEST:19440|SBDS|0.000485519059963831<>ScoreDetail__10691|SDS|0.000263546278726544__19440|SBDS|0.000485519059963831__ 0 0 0 0 0 220342 12417341 294882 19573 10691 SDS SDS SDS 8 0.0 After hybridization the arrays were washed in 2_amp_#xd7 SSC_amp_#x2013 0.1% SDS and 0.2_amp_#xd7 SSC for 20 min respectively and then rinsed 1 JUMiner_v2.2 1 0 0 2 19440 TotalCon:2<>10691|SDS|10993|Complete__19440|SBDS|51119|Complete__<>AvaiableGeneRif=2<>BEST:19440|SBDS|0.000485519059963831<>ScoreDetail__10691|SDS|0.000263546278726544__19440|SBDS|0.000485519059963831__ 0 0 0 0 0 220347 12417341 294892 8451 13734 GLYAT CAT CAT 27 0.5 T-3_amp_#x2032 5_amp_#x2032 -TGA AGT CGC AGG AGA CAA CCT-3_amp_#x2032 5_amp_#x2032 -CAT CAA GAA GGT GGT GAA GCA GGC ATC-3_amp_#x2032 clone 1 11 JUMiner_v2.2 1 2 35 0 1 0 TotalCon:2<>1516|CAT|847|Complete__13734|GLYAT|10249|No_GeneRif__<>AvaiableGeneRif=1<> 0 0 0 0 0 220348 12417341 294892 8278 4250 GGT1 GGT GGT 30 0.5 AGT CGC AGG AGA CAA CCT-3_amp_#x2032 5_amp_#x2032 -CAT CAA GAA GGT GGT GAA GCA GGC ATC-3_amp_#x2032 clone 1 5_amp_#x2032 -CCG TCA 1 JUMiner_v2.2 1 2 35 0 1 0 TotalCon:6<>4250|GGT1|2678|Complete__4251|GGT2|728441|No_GeneRif__33426|GGTLC3|728226|No_GeneRif__33428|GGTLC4P|729838|No_GeneRif__33427|GGTLC5P|653590|No_GeneRif__4252|GGT3P|2679|No_GeneRif__<>AvaiableGeneRif=1<> 0 0 0 0 0 220349 12417341 294892 8278 4250 GGT1 GGT GGT 31 0.5 CGC AGG AGA CAA CCT-3_amp_#x2032 5_amp_#x2032 -CAT CAA GAA GGT GGT GAA GCA GGC ATC-3_amp_#x2032 clone 1 5_amp_#x2032 -CCG TCA CTC 1 JUMiner_v2.2 1 2 35 0 1 0 TotalCon:6<>4250|GGT1|2678|Complete__4251|GGT2|728441|No_GeneRif__33426|GGTLC3|728226|No_GeneRif__33428|GGTLC4P|729838|No_GeneRif__33427|GGTLC5P|653590|No_GeneRif__4252|GGT3P|2679|No_GeneRif__<>AvaiableGeneRif=1<> 0 0 0 0 0 220350 12417341 294892 1271 795 ATM ATC ATC-3_amp_#x2032 35 0.5 CCT-3_amp_#x2032 5_amp_#x2032 -CAT CAA GAA GGT GGT GAA GCA GGC ATC-3_amp_#x2032 clone 1 5_amp_#x2032 -CCG TCA CTC AAA AGG TTG AA-3_amp_#x2032 11 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220351 12417341 294892 8278 4250 GGT1 GTG GTG 47 0.5 -CCG TCA CTC AAA AGG TTG AA-3_amp_#x2032 5_amp_#x2032 -TGG CGT GTG AAG TGA CTT TT-3_amp_#x2032 5_amp_#x2032 -AGC ATG AAG AGA CCT 1 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220353 12417341 294892 1271 795 ATM ATC ATC 84 0.5 AGG TGA AGT AG-3_amp_#x2032 5_amp_#x2032 -CTC AGC GAG TAT GGC ATC AAT GTG AAG AAG-3_amp_#x2032 clone 3 5_amp_#x2032 -TAG GAG CCA 11 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220354 12417341 294892 8278 4250 GGT1 GTG GTG 86 0.5 AGT AG-3_amp_#x2032 5_amp_#x2032 -CTC AGC GAG TAT GGC ATC AAT GTG AAG AAG-3_amp_#x2032 clone 3 5_amp_#x2032 -TAG GAG CCA TCC GAG 1 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220355 12417341 294892 8451 13734 GLYAT CAT CAT 99 0.5 5_amp_#x2032 -TAG GAG CCA TCC GAG ACA AC-3_amp_#x2032 5_amp_#x2032 -TAC CAT GGC ACT TCC TGA CA-3_amp_#x2032 5_amp_#x2032 -CAC TAG CTG GAG 11 JUMiner_v2.2 1 2 35 0 1 0 TotalCon:2<>1516|CAT|847|Complete__13734|GLYAT|10249|No_GeneRif__<>AvaiableGeneRif=1<> 0 0 0 0 0 220356 12417341 294892 7572 17371 FHL5 ACT ACT 101 0.3 GAG CCA TCC GAG ACA AC-3_amp_#x2032 5_amp_#x2032 -TAC CAT GGC ACT TCC TGA CA-3_amp_#x2032 5_amp_#x2032 -CAC TAG CTG GAG CCA GTA 1 JUMiner_v2.2 1 2 35 0 2 145 TotalCon:6<>24157|ACOT7|11332|Complete__17371|FHL5|9457|Complete__16|SERPINA3|12|Complete__17780|ACTBL2|345651|No_GeneRif__144|ACTG1|71|Complete__145|ACTG2|72|Complete__<>AvaiableGeneRif=5<>BEST:145|ACTG2|0.000895372811881351<>ScoreDetail__17371|FHL5|0.000809922710232795__145|ACTG2|0.000895372811881351__24157|ACOT7|0.000565426561631495__144|ACTG1|0.000314582224765653__16|SERPINA3|0.000578228402579135__ 0 0 0 0 0 220357 12417341 294892 20237 1421 SLC25A20 CAC CAC 105 0.3 AC-3_amp_#x2032 5_amp_#x2032 -TAC CAT GGC ACT TCC TGA CA-3_amp_#x2032 5_amp_#x2032 -CAC TAG CTG GAG CCA GTA TAA CGG GGA-3_amp_#x2032 clone 4 1 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220359 12417341 294892 23798 12612 USP14 TGT TGT 143 0.6 AAG CTG GGC TTG CCC AC-3_amp_#x2032 clone 5 5_amp_#x2032 -GCC TGT TCT GTC ACC ATC AA-3_amp_#x2032 5_amp_#x2032 -GCA GAG GCC ACA 1 JUMiner_v2.2 1 2 35 0 1 0 TotalCon:2<>23797|QTRT1|81890|No_GeneRif__12612|USP14|9097|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 220360 12417341 294892 1271 795 ATM ATC ATC 147 0.5 CCC AC-3_amp_#x2032 clone 5 5_amp_#x2032 -GCC TGT TCT GTC ACC ATC AA-3_amp_#x2032 5_amp_#x2032 -GCA GAG GCC ACA GGT TTA GA-3_amp_#x2032 5_amp_#x2032 11 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220361 12417341 294892 8278 4250 GGT1 GGT GGT 153 0.5 TCT GTC ACC ATC AA-3_amp_#x2032 5_amp_#x2032 -GCA GAG GCC ACA GGT TTA GA-3_amp_#x2032 5_amp_#x2032 -CCA TTC AGC AGT CCA TTG AAA 1 JUMiner_v2.2 1 2 35 0 1 0 TotalCon:6<>4250|GGT1|2678|Complete__4251|GGT2|728441|No_GeneRif__33426|GGTLC3|728226|No_GeneRif__33428|GGTLC4P|729838|No_GeneRif__33427|GGTLC5P|653590|No_GeneRif__4252|GGT3P|2679|No_GeneRif__<>AvaiableGeneRif=1<> 0 0 0 0 0 220363 12417341 294892 7572 17371 FHL5 ACT ACT 185 0.3 GCC ACA GAC AGC ACA GA-3_amp_#x2032 5_amp_#x2032 -AGG GCC CTA ACT ACC TGA CGG CCT GT-3_amp_#x2032 clone 7 5_amp_#x2032 -GTT GAC 1 JUMiner_v2.2 1 2 35 0 2 145 TotalCon:6<>24157|ACOT7|11332|Complete__17371|FHL5|9457|Complete__16|SERPINA3|12|Complete__17780|ACTBL2|345651|No_GeneRif__144|ACTG1|71|Complete__145|ACTG2|72|Complete__<>AvaiableGeneRif=5<>BEST:145|ACTG2|0.000895372811881351<>ScoreDetail__17371|FHL5|0.000809922710232795__145|ACTG2|0.000895372811881351__24157|ACOT7|0.000565426561631495__144|ACTG1|0.000314582224765653__16|SERPINA3|0.000578228402579135__ 0 0 0 0 0 220366 12417341 294892 8451 13734 GLYAT CAT CAT 207 0.5 AG-3_amp_#x2032 5_amp_#x2032 -CCT GTA GAC GGC ATG GAA AT-3_amp_#x2032 5_amp_#x2032 -CAT CGA CGT CTA CCA CAA GTA CTC CCT GAT-3_amp_#x2032 clone 11 JUMiner_v2.2 1 2 35 0 1 0 TotalCon:2<>1516|CAT|847|Complete__13734|GLYAT|10249|No_GeneRif__<>AvaiableGeneRif=1<> 0 0 0 0 0 220368 12417341 294892 8451 13734 GLYAT GAT GAT-3_amp_#x2032 216 0.5 5_amp_#x2032 -CAT CGA CGT CTA CCA CAA GTA CTC CCT GAT-3_amp_#x2032 clone 8 5_amp_#x2032 -AAG TGC GAG GGA TGC AAA T-3_amp_#x2032 11 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220369 12417341 294892 20237 1421 SLC25A20 CAC CAC 231 0.3 GGA TGC AAA T-3_amp_#x2032 5_amp_#x2032 -ACA CAG TCC TTG GCA CAC TT-3_amp_#x2032 5_amp_#x2032 -ACC TCC TGC AAG AAG AGC TGC TGC 1 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220370 12417341 294892 8451 13734 GLYAT GAT GAT 246 0.5 AAG AGC TGC TGC TC-3_amp_#x2032 clone 9 5_amp_#x2032 -TCC CTT GAT CCC ACA AGT TC-3_amp_#x2032 5_amp_#x2032 -ACA GGC ATA CAC CAC 11 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220371 12417341 294892 1271 795 ATM ATA ATA 253 0.5 -TCC CTT GAT CCC ACA AGT TC-3_amp_#x2032 5_amp_#x2032 -ACA GGC ATA CAC CAC CAC AT-3_amp_#x2032 5_amp_#x2032 -AGG CAG CAT AGT GAG 1 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220372 12417341 294892 20237 1421 SLC25A20 CAC CAC 254 0.3 CTT GAT CCC ACA AGT TC-3_amp_#x2032 5_amp_#x2032 -ACA GGC ATA CAC CAC CAC AT-3_amp_#x2032 5_amp_#x2032 -AGG CAG CAT AGT GAG ACC 1 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220373 12417341 294892 20237 1421 SLC25A20 CAC CAC 255 0.3 GAT CCC ACA AGT TC-3_amp_#x2032 5_amp_#x2032 -ACA GGC ATA CAC CAC CAC AT-3_amp_#x2032 5_amp_#x2032 -AGG CAG CAT AGT GAG ACC CCC 1 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220374 12417341 294892 20237 1421 SLC25A20 CAC CAC 256 0.3 CCC ACA AGT TC-3_amp_#x2032 5_amp_#x2032 -ACA GGC ATA CAC CAC CAC AT-3_amp_#x2032 5_amp_#x2032 -AGG CAG CAT AGT GAG ACC CCC ATC 1 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220375 12417341 294892 8451 13734 GLYAT CAT CAT 260 0.5 -ACA GGC ATA CAC CAC CAC AT-3_amp_#x2032 5_amp_#x2032 -AGG CAG CAT AGT GAG ACC CCC ATC TCT ATA-3_amp_#x2032 clone 10 5_amp_#x2032 11 JUMiner_v2.2 1 2 35 0 1 0 TotalCon:2<>1516|CAT|847|Complete__13734|GLYAT|10249|No_GeneRif__<>AvaiableGeneRif=1<> 0 0 0 0 0 220376 12417341 294892 1271 795 ATM ATC ATC 265 0.5 CAC AT-3_amp_#x2032 5_amp_#x2032 -AGG CAG CAT AGT GAG ACC CCC ATC TCT ATA-3_amp_#x2032 clone 10 5_amp_#x2032 -AGC TGC AGA ACA AGG 11 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220377 12417341 294892 1271 795 ATM ATA ATA-3_amp_#x2032 267 0.5 5_amp_#x2032 -AGG CAG CAT AGT GAG ACC CCC ATC TCT ATA-3_amp_#x2032 clone 10 5_amp_#x2032 -AGC TGC AGA ACA AGG AGC AT-3_amp_#x2032 1 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220378 12417341 294892 8278 4250 GGT1 GTG GTG 277 0.5 10 5_amp_#x2032 -AGC TGC AGA ACA AGG AGC AT-3_amp_#x2032 5_amp_#x2032 -GTG AAG CCC CAC TTC TTT GA-3_amp_#x2032 5_amp_#x2032 -AGT TCA AGT 1 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220379 12417341 294892 20237 1421 SLC25A20 CAC CAC 280 0.3 TGC AGA ACA AGG AGC AT-3_amp_#x2032 5_amp_#x2032 -GTG AAG CCC CAC TTC TTT GA-3_amp_#x2032 5_amp_#x2032 -AGT TCA AGT TTC CTG GCC 1 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220380 12417341 294892 7572 17371 FHL5 ACT ACT 296 0.3 TTC CTG GCC GCC AGA AGA T-3_amp_#x2032 clone 11 5_amp_#x2032 -ACT GGT ACC CGT TGG AAC AA-3_amp_#x2032 5_amp_#x2032 -GTT CAT CCC 1 JUMiner_v2.2 1 2 35 0 2 145 TotalCon:6<>24157|ACOT7|11332|Complete__17371|FHL5|9457|Complete__16|SERPINA3|12|Complete__17780|ACTBL2|345651|No_GeneRif__144|ACTG1|71|Complete__145|ACTG2|72|Complete__<>AvaiableGeneRif=5<>BEST:145|ACTG2|0.000895372811881351<>ScoreDetail__17371|FHL5|0.000809922710232795__145|ACTG2|0.000895372811881351__24157|ACOT7|0.000565426561631495__144|ACTG1|0.000314582224765653__16|SERPINA3|0.000578228402579135__ 0 0 0 0 0 220381 12417341 294892 8278 4250 GGT1 GGT GGT 297 0.5 CTG GCC GCC AGA AGA T-3_amp_#x2032 clone 11 5_amp_#x2032 -ACT GGT ACC CGT TGG AAC AA-3_amp_#x2032 5_amp_#x2032 -GTT CAT CCC ATC 1 JUMiner_v2.2 1 2 35 0 1 0 TotalCon:6<>4250|GGT1|2678|Complete__4251|GGT2|728441|No_GeneRif__33426|GGTLC3|728226|No_GeneRif__33428|GGTLC4P|729838|No_GeneRif__33427|GGTLC5P|653590|No_GeneRif__4252|GGT3P|2679|No_GeneRif__<>AvaiableGeneRif=1<> 0 0 0 0 0 220382 12417341 294892 8451 13734 GLYAT CAT CAT 304 0.5 5_amp_#x2032 -ACT GGT ACC CGT TGG AAC AA-3_amp_#x2032 5_amp_#x2032 -GTT CAT CCC ATC GTG GAT TT-3_amp_#x2032 5_amp_#x2032 -TGG TAC ACG ATT 11 JUMiner_v2.2 1 2 35 0 1 0 TotalCon:2<>1516|CAT|847|Complete__13734|GLYAT|10249|No_GeneRif__<>AvaiableGeneRif=1<> 0 0 0 0 0 220383 12417341 294892 1271 795 ATM ATC ATC 306 0.5 GGT ACC CGT TGG AAC AA-3_amp_#x2032 5_amp_#x2032 -GTT CAT CCC ATC GTG GAT TT-3_amp_#x2032 5_amp_#x2032 -TGG TAC ACG ATT TTT AAG 11 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220384 12417341 294892 8278 4250 GGT1 GTG GTG 307 0.5 ACC CGT TGG AAC AA-3_amp_#x2032 5_amp_#x2032 -GTT CAT CCC ATC GTG GAT TT-3_amp_#x2032 5_amp_#x2032 -TGG TAC ACG ATT TTT AAG GAC 1 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220385 12417341 294892 8451 13734 GLYAT GAT GAT 308 0.5 CGT TGG AAC AA-3_amp_#x2032 5_amp_#x2032 -GTT CAT CCC ATC GTG GAT TT-3_amp_#x2032 5_amp_#x2032 -TGG TAC ACG ATT TTT AAG GAC CAC 11 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220386 12417341 294892 20237 1421 SLC25A20 CAC CAC 317 0.3 GAT TT-3_amp_#x2032 5_amp_#x2032 -TGG TAC ACG ATT TTT AAG GAC CAC GTG TCT-3_amp_#x2032 1 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220387 12417341 294892 8278 4250 GGT1 GTG GTG 318 0.5 TT-3_amp_#x2032 5_amp_#x2032 -TGG TAC ACG ATT TTT AAG GAC CAC GTG TCT-3_amp_#x2032 1 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220388 12417341 294892 8012 4065 GAA GAA GAA 14 0.1 primer reverse primer and TaqMan probe GAPDH 5_amp_#x2032 -CCT GGA GAA ACC TGC CAA GTA T-3_amp_#x2032 5_amp_#x2032 -TGA AGT CGC AGG 6 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220389 12417341 294892 130 84 ACACA ACC ACC 15 0.0 reverse primer and TaqMan probe GAPDH 5_amp_#x2032 -CCT GGA GAA ACC TGC CAA GTA T-3_amp_#x2032 5_amp_#x2032 -TGA AGT CGC AGG AGA 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220390 12417341 294892 22079 11778 TGM2 TGC TGC 16 0.0 primer and TaqMan probe GAPDH 5_amp_#x2032 -CCT GGA GAA ACC TGC CAA GTA T-3_amp_#x2032 5_amp_#x2032 -TGA AGT CGC AGG AGA CAA 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220391 12417341 294892 10718 6138 ITGA2B GTA GTA 18 0.0 TaqMan probe GAPDH 5_amp_#x2032 -CCT GGA GAA ACC TGC CAA GTA T-3_amp_#x2032 5_amp_#x2032 -TGA AGT CGC AGG AGA CAA CCT-3_amp_#x2032 5_amp_#x2032 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220392 12417341 294892 21860 11592 TBX1 TGA TGA 20 0.0 5_amp_#x2032 -CCT GGA GAA ACC TGC CAA GTA T-3_amp_#x2032 5_amp_#x2032 -TGA AGT CGC AGG AGA CAA CCT-3_amp_#x2032 5_amp_#x2032 -CAT CAA GAA 11 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220393 12417341 294892 452 333 AGT AGT AGT 21 0.0 -CCT GGA GAA ACC TGC CAA GTA T-3_amp_#x2032 5_amp_#x2032 -TGA AGT CGC AGG AGA CAA CCT-3_amp_#x2032 5_amp_#x2032 -CAT CAA GAA GGT 1 JUMiner_v2.2 1 0 0 2 341 TotalCon:2<>333|AGT|183|Complete__341|AGXT|189|Complete__<>AvaiableGeneRif=2<>BEST:341|AGXT|0.000452679490518535<>ScoreDetail__333|AGT|0.000350759529288421__341|AGXT|0.000452679490518535__ 0 0 0 0 0 220394 12417341 294892 426 318 AGA AGA AGA 24 0.1 ACC TGC CAA GTA T-3_amp_#x2032 5_amp_#x2032 -TGA AGT CGC AGG AGA CAA CCT-3_amp_#x2032 5_amp_#x2032 -CAT CAA GAA GGT GGT GAA GCA 6 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220395 12417341 294892 8012 4065 GAA GAA GAA 29 0.4 -TGA AGT CGC AGG AGA CAA CCT-3_amp_#x2032 5_amp_#x2032 -CAT CAA GAA GGT GGT GAA GCA GGC ATC-3_amp_#x2032 clone 1 5_amp_#x2032 -CCG 6 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220396 12417341 294892 8012 4065 GAA GAA GAA 32 0.3 AGG AGA CAA CCT-3_amp_#x2032 5_amp_#x2032 -CAT CAA GAA GGT GGT GAA GCA GGC ATC-3_amp_#x2032 clone 1 5_amp_#x2032 -CCG TCA CTC AAA 6 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220397 12417341 294892 8190 15990 GCA GCA GCA 33 0.2 AGA CAA CCT-3_amp_#x2032 5_amp_#x2032 -CAT CAA GAA GGT GGT GAA GCA GGC ATC-3_amp_#x2032 clone 1 5_amp_#x2032 -CCG TCA CTC AAA AGG 6 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220398 12417341 294892 17 13666 AAAS AAA AAA 41 0.0 GAA GCA GGC ATC-3_amp_#x2032 clone 1 5_amp_#x2032 -CCG TCA CTC AAA AGG TTG AA-3_amp_#x2032 5_amp_#x2032 -TGG CGT GTG AAG TGA CTT 1 JUMiner_v2.2 1 0 0 2 13666 TotalCon:2<>13666|AAAS|8086|Complete__620|APP|351|Complete__<>AvaiableGeneRif=2<>BEST:13666|AAAS|0.000598571450610142<>ScoreDetail__13666|AAAS|0.000598571450610142__620|APP|0.000379773565387191__ 0 0 0 0 0 220399 12417341 294892 23680 12555 UGT8 CGT CGT 46 0.2 5_amp_#x2032 -CCG TCA CTC AAA AGG TTG AA-3_amp_#x2032 5_amp_#x2032 -TGG CGT GTG AAG TGA CTT TT-3_amp_#x2032 5_amp_#x2032 -AGC ATG AAG AGA 5 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220400 12417341 294892 13410 7211 MPG AAG AAG 48 0.2 TCA CTC AAA AGG TTG AA-3_amp_#x2032 5_amp_#x2032 -TGG CGT GTG AAG TGA CTT TT-3_amp_#x2032 5_amp_#x2032 -AGC ATG AAG AGA CCT TTG 5 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220401 12417341 294892 21860 11592 TBX1 TGA TGA 49 0.1 CTC AAA AGG TTG AA-3_amp_#x2032 5_amp_#x2032 -TGG CGT GTG AAG TGA CTT TT-3_amp_#x2032 5_amp_#x2032 -AGC ATG AAG AGA CCT TTG AGG 6 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220402 12417341 294892 13410 7211 MPG AAG AAG 54 0.1 -TGG CGT GTG AAG TGA CTT TT-3_amp_#x2032 5_amp_#x2032 -AGC ATG AAG AGA CCT TTG AGG AGA AAC TAG TG-3_amp_#x2032 clone 2 6 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220403 12417341 294892 426 318 AGA AGA AGA 55 0.2 CGT GTG AAG TGA CTT TT-3_amp_#x2032 5_amp_#x2032 -AGC ATG AAG AGA CCT TTG AGG AGA AAC TAG TG-3_amp_#x2032 clone 2 5_amp_#x2032 5 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220404 12417341 294892 426 318 AGA AGA AGA 59 0.0 CTT TT-3_amp_#x2032 5_amp_#x2032 -AGC ATG AAG AGA CCT TTG AGG AGA AAC TAG TG-3_amp_#x2032 clone 2 5_amp_#x2032 -AAG AGC AAG GAC 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220405 12417341 294892 13410 7211 MPG AAG AAG 65 0.0 CCT TTG AGG AGA AAC TAG TG-3_amp_#x2032 clone 2 5_amp_#x2032 -AAG AGC AAG GAC CGC AAG TA-3_amp_#x2032 5_amp_#x2032 -GGG TGG CTC 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220406 12417341 294892 13410 7211 MPG AAG AAG 67 0.0 AGG AGA AAC TAG TG-3_amp_#x2032 clone 2 5_amp_#x2032 -AAG AGC AAG GAC CGC AAG TA-3_amp_#x2032 5_amp_#x2032 -GGG TGG CTC AGG TGA 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220407 12417341 294892 13410 7211 MPG AAG AAG 70 0.0 TAG TG-3_amp_#x2032 clone 2 5_amp_#x2032 -AAG AGC AAG GAC CGC AAG TA-3_amp_#x2032 5_amp_#x2032 -GGG TGG CTC AGG TGA AGT AG-3_amp_#x2032 5_amp_#x2032 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220408 12417341 294892 21860 11592 TBX1 TGA TGA 76 0.0 AAG GAC CGC AAG TA-3_amp_#x2032 5_amp_#x2032 -GGG TGG CTC AGG TGA AGT AG-3_amp_#x2032 5_amp_#x2032 -CTC AGC GAG TAT GGC ATC AAT 11 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220409 12417341 294892 452 333 AGT AGT AGT 77 0.0 GAC CGC AAG TA-3_amp_#x2032 5_amp_#x2032 -GGG TGG CTC AGG TGA AGT AG-3_amp_#x2032 5_amp_#x2032 -CTC AGC GAG TAT GGC ATC AAT GTG 1 JUMiner_v2.2 1 0 0 2 341 TotalCon:2<>333|AGT|183|Complete__341|AGXT|189|Complete__<>AvaiableGeneRif=2<>BEST:341|AGXT|0.000452679490518535<>ScoreDetail__333|AGT|0.000350759529288421__341|AGXT|0.000452679490518535__ 0 0 0 0 0 220410 12417341 294892 21790 11573 TAT TAT TAT 82 0.1 TGG CTC AGG TGA AGT AG-3_amp_#x2032 5_amp_#x2032 -CTC AGC GAG TAT GGC ATC AAT GTG AAG AAG-3_amp_#x2032 clone 3 5_amp_#x2032 -TAG 6 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220411 12417341 294892 19697 8941 SERPINA1 AAT AAT 85 0.4 TGA AGT AG-3_amp_#x2032 5_amp_#x2032 -CTC AGC GAG TAT GGC ATC AAT GTG AAG AAG-3_amp_#x2032 clone 3 5_amp_#x2032 -TAG GAG CCA TCC 5 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220412 12417341 294892 13410 7211 MPG AAG AAG 87 0.2 AG-3_amp_#x2032 5_amp_#x2032 -CTC AGC GAG TAT GGC ATC AAT GTG AAG AAG-3_amp_#x2032 clone 3 5_amp_#x2032 -TAG GAG CCA TCC GAG ACA 5 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220413 12417341 294892 13410 7211 MPG AAG AAG-3_amp_#x2032 88 0.1 5_amp_#x2032 -CTC AGC GAG TAT GGC ATC AAT GTG AAG AAG-3_amp_#x2032 clone 3 5_amp_#x2032 -TAG GAG CCA TCC GAG ACA AC-3_amp_#x2032 6 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220414 12417341 294892 7357 3604 FBN2 CCA CCA 93 0.0 ATC AAT GTG AAG AAG-3_amp_#x2032 clone 3 5_amp_#x2032 -TAG GAG CCA TCC GAG ACA AC-3_amp_#x2032 5_amp_#x2032 -TAC CAT GGC ACT TCC 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220415 12417341 294892 21860 11592 TBX1 TGA TGA 103 0.2 TCC GAG ACA AC-3_amp_#x2032 5_amp_#x2032 -TAC CAT GGC ACT TCC TGA CA-3_amp_#x2032 5_amp_#x2032 -CAC TAG CTG GAG CCA GTA TAA CGG 6 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220416 12417341 294892 7357 3604 FBN2 CCA CCA 109 0.0 GGC ACT TCC TGA CA-3_amp_#x2032 5_amp_#x2032 -CAC TAG CTG GAG CCA GTA TAA CGG GGA-3_amp_#x2032 clone 4 5_amp_#x2032 -GAA GCT GAA 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220417 12417341 294892 10718 6138 ITGA2B GTA GTA 110 0.0 ACT TCC TGA CA-3_amp_#x2032 5_amp_#x2032 -CAC TAG CTG GAG CCA GTA TAA CGG GGA-3_amp_#x2032 clone 4 5_amp_#x2032 -GAA GCT GAA GCA 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220418 12417341 294892 8012 4065 GAA GAA GAA 116 0.0 CTG GAG CCA GTA TAA CGG GGA-3_amp_#x2032 clone 4 5_amp_#x2032 -GAA GCT GAA GCA GGA TCA AA-3_amp_#x2032 5_amp_#x2032 -AGG GAG CAG 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220419 12417341 294892 17756 9753 QPCT GCT GCT 117 0.0 GAG CCA GTA TAA CGG GGA-3_amp_#x2032 clone 4 5_amp_#x2032 -GAA GCT GAA GCA GGA TCA AA-3_amp_#x2032 5_amp_#x2032 -AGG GAG CAG CTT 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220420 12417341 294892 8012 4065 GAA GAA GAA 118 0.0 CCA GTA TAA CGG GGA-3_amp_#x2032 clone 4 5_amp_#x2032 -GAA GCT GAA GCA GGA TCA AA-3_amp_#x2032 5_amp_#x2032 -AGG GAG CAG CTT TCA 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220421 12417341 294892 8190 15990 GCA GCA GCA 119 0.0 GTA TAA CGG GGA-3_amp_#x2032 clone 4 5_amp_#x2032 -GAA GCT GAA GCA GGA TCA AA-3_amp_#x2032 5_amp_#x2032 -AGG GAG CAG CTT TCA CCT 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220422 12417341 294892 13410 7211 MPG AAG AAG 130 0.1 AA-3_amp_#x2032 5_amp_#x2032 -AGG GAG CAG CTT TCA CCT AT-3_amp_#x2032 5_amp_#x2032 -AAG TCC TTA AGA AAG CTG GGC TTG CCC AC-3_amp_#x2032 clone 6 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220423 12417341 294892 426 318 AGA AGA AGA 133 0.0 GAG CAG CTT TCA CCT AT-3_amp_#x2032 5_amp_#x2032 -AAG TCC TTA AGA AAG CTG GGC TTG CCC AC-3_amp_#x2032 clone 5 5_amp_#x2032 -GCC 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220424 12417341 294892 13410 7211 MPG AAG AAG 134 0.0 CAG CTT TCA CCT AT-3_amp_#x2032 5_amp_#x2032 -AAG TCC TTA AGA AAG CTG GGC TTG CCC AC-3_amp_#x2032 clone 5 5_amp_#x2032 -GCC TGT 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220425 12417341 294892 130 84 ACACA ACC ACC 146 0.2 TTG CCC AC-3_amp_#x2032 clone 5 5_amp_#x2032 -GCC TGT TCT GTC ACC ATC AA-3_amp_#x2032 5_amp_#x2032 -GCA GAG GCC ACA GGT TTA GA-3_amp_#x2032 5 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220426 12417341 294892 8190 15990 GCA GCA GCA 149 0.1 5 5_amp_#x2032 -GCC TGT TCT GTC ACC ATC AA-3_amp_#x2032 5_amp_#x2032 -GCA GAG GCC ACA GGT TTA GA-3_amp_#x2032 5_amp_#x2032 -CCA TTC AGC 6 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220427 12417341 294892 7357 3604 FBN2 CCA CCA 156 0.0 AA-3_amp_#x2032 5_amp_#x2032 -GCA GAG GCC ACA GGT TTA GA-3_amp_#x2032 5_amp_#x2032 -CCA TTC AGC AGT CCA TTG AAA GGC TCT TAG-3_amp_#x2032 clone 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220428 12417341 294892 452 333 AGT AGT AGT 159 0.0 GAG GCC ACA GGT TTA GA-3_amp_#x2032 5_amp_#x2032 -CCA TTC AGC AGT CCA TTG AAA GGC TCT TAG-3_amp_#x2032 clone 6 5_amp_#x2032 -CCT 1 JUMiner_v2.2 1 0 0 2 341 TotalCon:2<>333|AGT|183|Complete__341|AGXT|189|Complete__<>AvaiableGeneRif=2<>BEST:341|AGXT|0.000452679490518535<>ScoreDetail__333|AGT|0.000350759529288421__341|AGXT|0.000452679490518535__ 0 0 0 0 0 220429 12417341 294892 7357 3604 FBN2 CCA CCA 160 0.0 GCC ACA GGT TTA GA-3_amp_#x2032 5_amp_#x2032 -CCA TTC AGC AGT CCA TTG AAA GGC TCT TAG-3_amp_#x2032 clone 6 5_amp_#x2032 -CCT GTT 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220430 12417341 294892 17 13666 AAAS AAA AAA 162 0.0 GGT TTA GA-3_amp_#x2032 5_amp_#x2032 -CCA TTC AGC AGT CCA TTG AAA GGC TCT TAG-3_amp_#x2032 clone 6 5_amp_#x2032 -CCT GTT GGA GGA 1 JUMiner_v2.2 1 0 0 2 13666 TotalCon:2<>13666|AAAS|8086|Complete__620|APP|351|Complete__<>AvaiableGeneRif=2<>BEST:13666|AAAS|0.000598571450610142<>ScoreDetail__13666|AAAS|0.000598571450610142__620|APP|0.000379773565387191__ 0 0 0 0 0 220431 12417341 294892 8190 15990 GCA GCA GCA 172 0.0 GGC TCT TAG-3_amp_#x2032 clone 6 5_amp_#x2032 -CCT GTT GGA GGA GCA GAA CT-3_amp_#x2032 5_amp_#x2032 -GAA GCC ACA GAC AGC ACA GA-3_amp_#x2032 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220432 12417341 294892 8012 4065 GAA GAA GAA 173 0.0 TCT TAG-3_amp_#x2032 clone 6 5_amp_#x2032 -CCT GTT GGA GGA GCA GAA CT-3_amp_#x2032 5_amp_#x2032 -GAA GCC ACA GAC AGC ACA GA-3_amp_#x2032 5_amp_#x2032 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220433 12417341 294892 8012 4065 GAA GAA GAA 175 0.0 6 5_amp_#x2032 -CCT GTT GGA GGA GCA GAA CT-3_amp_#x2032 5_amp_#x2032 -GAA GCC ACA GAC AGC ACA GA-3_amp_#x2032 5_amp_#x2032 -AGG GCC CTA 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220434 12417341 294892 130 84 ACACA ACC ACC 186 0.2 ACA GAC AGC ACA GA-3_amp_#x2032 5_amp_#x2032 -AGG GCC CTA ACT ACC TGA CGG CCT GT-3_amp_#x2032 clone 7 5_amp_#x2032 -GTT GAC CGA 5 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220435 12417341 294892 21860 11592 TBX1 TGA TGA 187 0.2 GAC AGC ACA GA-3_amp_#x2032 5_amp_#x2032 -AGG GCC CTA ACT ACC TGA CGG CCT GT-3_amp_#x2032 clone 7 5_amp_#x2032 -GTT GAC CGA GCT 6 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220436 12417341 294892 4265 1885 CGA CGA CGA 195 0.0 ACC TGA CGG CCT GT-3_amp_#x2032 clone 7 5_amp_#x2032 -GTT GAC CGA GCT GGA GAA AG-3_amp_#x2032 5_amp_#x2032 -CCT GTA GAC GGC ATG 1 JUMiner_v2.2 1 0 0 2 1929 TotalCon:2<>1885|CGA|1081|Complete__1929|CHGA|1113|Complete__<>AvaiableGeneRif=2<>BEST:1929|CHGA|0.000418791508538899<>ScoreDetail__1885|CGA|0.00034398566484308__1929|CHGA|0.000418791508538899__ 0 0 0 0 0 220437 12417341 294892 17756 9753 QPCT GCT GCT 196 0.0 TGA CGG CCT GT-3_amp_#x2032 clone 7 5_amp_#x2032 -GTT GAC CGA GCT GGA GAA AG-3_amp_#x2032 5_amp_#x2032 -CCT GTA GAC GGC ATG GAA 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220438 12417341 294892 8012 4065 GAA GAA GAA 198 0.1 CCT GT-3_amp_#x2032 clone 7 5_amp_#x2032 -GTT GAC CGA GCT GGA GAA AG-3_amp_#x2032 5_amp_#x2032 -CCT GTA GAC GGC ATG GAA AT-3_amp_#x2032 5_amp_#x2032 6 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220439 12417341 294892 10718 6138 ITGA2B GTA GTA 201 0.2 5_amp_#x2032 -GTT GAC CGA GCT GGA GAA AG-3_amp_#x2032 5_amp_#x2032 -CCT GTA GAC GGC ATG GAA AT-3_amp_#x2032 5_amp_#x2032 -CAT CGA CGT CTA 5 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220440 12417341 294892 8012 4065 GAA GAA GAA 205 0.1 GCT GGA GAA AG-3_amp_#x2032 5_amp_#x2032 -CCT GTA GAC GGC ATG GAA AT-3_amp_#x2032 5_amp_#x2032 -CAT CGA CGT CTA CCA CAA GTA CTC 6 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220441 12417341 294892 4265 1885 CGA CGA CGA 208 0.2 5_amp_#x2032 -CCT GTA GAC GGC ATG GAA AT-3_amp_#x2032 5_amp_#x2032 -CAT CGA CGT CTA CCA CAA GTA CTC CCT GAT-3_amp_#x2032 clone 8 5 JUMiner_v2.2 1 2 35 0 2 1929 TotalCon:2<>1885|CGA|1081|Complete__1929|CHGA|1113|Complete__<>AvaiableGeneRif=2<>BEST:1929|CHGA|0.000418791508538899<>ScoreDetail__1885|CGA|0.00034398566484308__1929|CHGA|0.000418791508538899__ 0 0 0 0 0 220442 12417341 294892 23680 12555 UGT8 CGT CGT 209 0.1 -CCT GTA GAC GGC ATG GAA AT-3_amp_#x2032 5_amp_#x2032 -CAT CGA CGT CTA CCA CAA GTA CTC CCT GAT-3_amp_#x2032 clone 8 5_amp_#x2032 6 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220443 12417341 294892 7357 3604 FBN2 CCA CCA 211 0.0 GAC GGC ATG GAA AT-3_amp_#x2032 5_amp_#x2032 -CAT CGA CGT CTA CCA CAA GTA CTC CCT GAT-3_amp_#x2032 clone 8 5_amp_#x2032 -AAG TGC 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220444 12417341 294892 10718 6138 ITGA2B GTA GTA 213 0.1 ATG GAA AT-3_amp_#x2032 5_amp_#x2032 -CAT CGA CGT CTA CCA CAA GTA CTC CCT GAT-3_amp_#x2032 clone 8 5_amp_#x2032 -AAG TGC GAG GGA 6 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220445 12417341 294892 13410 7211 MPG AAG AAG 219 0.0 CTA CCA CAA GTA CTC CCT GAT-3_amp_#x2032 clone 8 5_amp_#x2032 -AAG TGC GAG GGA TGC AAA T-3_amp_#x2032 5_amp_#x2032 -ACA CAG TCC 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220446 12417341 294892 22079 11778 TGM2 TGC TGC 220 0.0 CCA CAA GTA CTC CCT GAT-3_amp_#x2032 clone 8 5_amp_#x2032 -AAG TGC GAG GGA TGC AAA T-3_amp_#x2032 5_amp_#x2032 -ACA CAG TCC TTG 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220447 12417341 294892 22079 11778 TGM2 TGC TGC 223 0.0 CTC CCT GAT-3_amp_#x2032 clone 8 5_amp_#x2032 -AAG TGC GAG GGA TGC AAA T-3_amp_#x2032 5_amp_#x2032 -ACA CAG TCC TTG GCA CAC TT-3_amp_#x2032 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220448 12417341 294892 17 13666 AAAS AAA AAA 224 0.0 CCT GAT-3_amp_#x2032 clone 8 5_amp_#x2032 -AAG TGC GAG GGA TGC AAA T-3_amp_#x2032 5_amp_#x2032 -ACA CAG TCC TTG GCA CAC TT-3_amp_#x2032 5_amp_#x2032 1 JUMiner_v2.2 1 0 0 2 13666 TotalCon:2<>13666|AAAS|8086|Complete__620|APP|351|Complete__<>AvaiableGeneRif=2<>BEST:13666|AAAS|0.000598571450610142<>ScoreDetail__13666|AAAS|0.000598571450610142__620|APP|0.000379773565387191__ 0 0 0 0 0 220449 12417341 294892 8190 15990 GCA GCA GCA 230 0.2 GAG GGA TGC AAA T-3_amp_#x2032 5_amp_#x2032 -ACA CAG TCC TTG GCA CAC TT-3_amp_#x2032 5_amp_#x2032 -ACC TCC TGC AAG AAG AGC TGC 5 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220450 12417341 294892 130 84 ACACA ACC ACC 233 0.1 T-3_amp_#x2032 5_amp_#x2032 -ACA CAG TCC TTG GCA CAC TT-3_amp_#x2032 5_amp_#x2032 -ACC TCC TGC AAG AAG AGC TGC TGC TC-3_amp_#x2032 clone 9 6 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220451 12417341 294892 22079 11778 TGM2 TGC TGC 235 0.0 -ACA CAG TCC TTG GCA CAC TT-3_amp_#x2032 5_amp_#x2032 -ACC TCC TGC AAG AAG AGC TGC TGC TC-3_amp_#x2032 clone 9 5_amp_#x2032 -TCC 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220452 12417341 294892 13410 7211 MPG AAG AAG 236 0.0 CAG TCC TTG GCA CAC TT-3_amp_#x2032 5_amp_#x2032 -ACC TCC TGC AAG AAG AGC TGC TGC TC-3_amp_#x2032 clone 9 5_amp_#x2032 -TCC CTT 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220453 12417341 294892 13410 7211 MPG AAG AAG 237 0.0 TCC TTG GCA CAC TT-3_amp_#x2032 5_amp_#x2032 -ACC TCC TGC AAG AAG AGC TGC TGC TC-3_amp_#x2032 clone 9 5_amp_#x2032 -TCC CTT GAT 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220454 12417341 294892 22079 11778 TGM2 TGC TGC 239 0.0 GCA CAC TT-3_amp_#x2032 5_amp_#x2032 -ACC TCC TGC AAG AAG AGC TGC TGC TC-3_amp_#x2032 clone 9 5_amp_#x2032 -TCC CTT GAT CCC ACA 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220455 12417341 294892 22079 11778 TGM2 TGC TGC 240 0.0 CAC TT-3_amp_#x2032 5_amp_#x2032 -ACC TCC TGC AAG AAG AGC TGC TGC TC-3_amp_#x2032 clone 9 5_amp_#x2032 -TCC CTT GAT CCC ACA AGT 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220456 12417341 294892 452 333 AGT AGT AGT 249 0.0 TGC TC-3_amp_#x2032 clone 9 5_amp_#x2032 -TCC CTT GAT CCC ACA AGT TC-3_amp_#x2032 5_amp_#x2032 -ACA GGC ATA CAC CAC CAC AT-3_amp_#x2032 5_amp_#x2032 1 JUMiner_v2.2 1 0 0 2 341 TotalCon:2<>333|AGT|183|Complete__341|AGXT|189|Complete__<>AvaiableGeneRif=2<>BEST:341|AGXT|0.000452679490518535<>ScoreDetail__333|AGT|0.000350759529288421__341|AGXT|0.000452679490518535__ 0 0 0 0 0 220457 12417341 294892 452 333 AGT AGT AGT 261 0.2 GGC ATA CAC CAC CAC AT-3_amp_#x2032 5_amp_#x2032 -AGG CAG CAT AGT GAG ACC CCC ATC TCT ATA-3_amp_#x2032 clone 10 5_amp_#x2032 -AGC 5 JUMiner_v2.2 1 2 35 0 2 341 TotalCon:2<>333|AGT|183|Complete__341|AGXT|189|Complete__<>AvaiableGeneRif=2<>BEST:341|AGXT|0.000452679490518535<>ScoreDetail__333|AGT|0.000350759529288421__341|AGXT|0.000452679490518535__ 0 0 0 0 0 220458 12417341 294892 130 84 ACACA ACC ACC 263 0.1 CAC CAC CAC AT-3_amp_#x2032 5_amp_#x2032 -AGG CAG CAT AGT GAG ACC CCC ATC TCT ATA-3_amp_#x2032 clone 10 5_amp_#x2032 -AGC TGC AGA 6 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220459 12417341 294892 22079 11778 TGM2 TGC TGC 271 0.0 GAG ACC CCC ATC TCT ATA-3_amp_#x2032 clone 10 5_amp_#x2032 -AGC TGC AGA ACA AGG AGC AT-3_amp_#x2032 5_amp_#x2032 -GTG AAG CCC CAC 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220460 12417341 294892 426 318 AGA AGA AGA 272 0.0 ACC CCC ATC TCT ATA-3_amp_#x2032 clone 10 5_amp_#x2032 -AGC TGC AGA ACA AGG AGC AT-3_amp_#x2032 5_amp_#x2032 -GTG AAG CCC CAC TTC 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220461 12417341 294892 13410 7211 MPG AAG AAG 278 0.3 5_amp_#x2032 -AGC TGC AGA ACA AGG AGC AT-3_amp_#x2032 5_amp_#x2032 -GTG AAG CCC CAC TTC TTT GA-3_amp_#x2032 5_amp_#x2032 -AGT TCA AGT TTC 6 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220462 12417341 294892 452 333 AGT AGT AGT 284 0.0 AT-3_amp_#x2032 5_amp_#x2032 -GTG AAG CCC CAC TTC TTT GA-3_amp_#x2032 5_amp_#x2032 -AGT TCA AGT TTC CTG GCC GCC AGA AGA T-3_amp_#x2032 clone 1 JUMiner_v2.2 1 0 0 2 341 TotalCon:2<>333|AGT|183|Complete__341|AGXT|189|Complete__<>AvaiableGeneRif=2<>BEST:341|AGXT|0.000452679490518535<>ScoreDetail__333|AGT|0.000350759529288421__341|AGXT|0.000452679490518535__ 0 0 0 0 0 220463 12417341 294892 452 333 AGT AGT AGT 286 0.0 -GTG AAG CCC CAC TTC TTT GA-3_amp_#x2032 5_amp_#x2032 -AGT TCA AGT TTC CTG GCC GCC AGA AGA T-3_amp_#x2032 clone 11 5_amp_#x2032 1 JUMiner_v2.2 1 0 0 2 341 TotalCon:2<>333|AGT|183|Complete__341|AGXT|189|Complete__<>AvaiableGeneRif=2<>BEST:341|AGXT|0.000452679490518535<>ScoreDetail__333|AGT|0.000350759529288421__341|AGXT|0.000452679490518535__ 0 0 0 0 0 220464 12417341 294892 426 318 AGA AGA AGA 291 0.0 TTT GA-3_amp_#x2032 5_amp_#x2032 -AGT TCA AGT TTC CTG GCC GCC AGA AGA T-3_amp_#x2032 clone 11 5_amp_#x2032 -ACT GGT ACC CGT TGG 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220465 12417341 294892 426 318 AGA AGA AGA 292 0.0 GA-3_amp_#x2032 5_amp_#x2032 -AGT TCA AGT TTC CTG GCC GCC AGA AGA T-3_amp_#x2032 clone 11 5_amp_#x2032 -ACT GGT ACC CGT TGG AAC 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220466 12417341 294892 130 84 ACACA ACC ACC 298 0.3 GCC GCC AGA AGA T-3_amp_#x2032 clone 11 5_amp_#x2032 -ACT GGT ACC CGT TGG AAC AA-3_amp_#x2032 5_amp_#x2032 -GTT CAT CCC ATC GTG 6 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220467 12417341 294892 23680 12555 UGT8 CGT CGT 299 0.1 GCC AGA AGA T-3_amp_#x2032 clone 11 5_amp_#x2032 -ACT GGT ACC CGT TGG AAC AA-3_amp_#x2032 5_amp_#x2032 -GTT CAT CCC ATC GTG GAT 6 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220468 12417341 294892 6069 23483 DOCK11 ACG ACG 312 0.0 -GTT CAT CCC ATC GTG GAT TT-3_amp_#x2032 5_amp_#x2032 -TGG TAC ACG ATT TTT AAG GAC CAC GTG TCT-3_amp_#x2032 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 220469 12417341 294892 13410 7211 MPG AAG AAG 315 0.1 ATC GTG GAT TT-3_amp_#x2032 5_amp_#x2032 -TGG TAC ACG ATT TTT AAG GAC CAC GTG TCT-3_amp_#x2032 6 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 220474 12417341 294924 641 451 AMACR RACE RACE 7 1.3 We cloned these two unknown genes using RACE methods and named them dorfin and neugrin in previous reports 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 220490 12417341 294936 20996 11179 SOD1 ALS ALS 28 3.9 Huntington disease Alzheimer disease Parkinson disease familial spinocerebellar degeneration and ALS 16 dorfin may possibly work to eliminate proteins which are 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0012197662335473<>ScoreDetail__5468|IGFALS|0.000411226482985504__11179|SOD1|0.0012197662335473__ 0 0 0 0 0 220494 12417341 294943 20996 11179 SOD1 ALS ALS 11 3.9 is paradoxical because gliosis is one of the hallmarks in ALS pathology 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0012197662335473<>ScoreDetail__5468|IGFALS|0.000411226482985504__11179|SOD1|0.0012197662335473__ 0 0 0 0 0 220505 12417341 294956 20996 11179 SOD1 ALS ALS 26 3.9 and if they are key molecules to explore treatments for ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0012197662335473<>ScoreDetail__5468|IGFALS|0.000411226482985504__11179|SOD1|0.0012197662335473__ 0 0 0 0 0 215952 12528305 289111 20996 11179 SOD1 ALS ALS 3 1.2 Amyotrophic lateral sclerosis (ALS) ALS is a rapidly progressive neuromuscular disease that destroys both upper 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00140420620671967<>ScoreDetail__5468|IGFALS|0.000182481751824818__11179|SOD1|0.00140420620671967__ 0 0 0 0 0 215953 12528305 289112 20996 11179 SOD1 ALS ALS 10 1.2 It is presumed that in the vast majority of cases ALS is acquired and occurs sporadically although the exact etiology is 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00140420620671967<>ScoreDetail__5468|IGFALS|0.000182481751824818__11179|SOD1|0.00140420620671967__ 0 0 0 0 0 199189 12843244 266717 20996 11179 SOD1 ALS ALS 29 3.2 transgenic mice a mouse model of amyotrophic lateral sclerosis (ALS), ALS before the onset of motor dysfunction and remains at the 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0014804281480155<>ScoreDetail__5468|IGFALS|0.00041031399818598__11179|SOD1|0.0014804281480155__ 0 0 0 0 0 199193 12843244 266720 20996 11179 SOD1 ALS ALS 15 3.2 to certain aspects of pathology in this mouse model of ALS their inhibition is not sufficient to prevent neurodegeneration 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0014804281480155<>ScoreDetail__5468|IGFALS|0.00041031399818598__11179|SOD1|0.0014804281480155__ 0 0 0 0 0 199194 12843244 266722 20996 11179 SOD1 ALS ALS 2 3.2 Key words ALS motor neuron degeneration neurodegeneration SOD1 caspase apoptosis 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0014804281480155<>ScoreDetail__5468|IGFALS|0.00041031399818598__11179|SOD1|0.0014804281480155__ 0 0 0 0 0 199196 12843244 266723 20996 11179 SOD1 ALS ALS 3 3.2 Amyotrophic lateral sclerosis (ALS) ALS is a fatal neurological disorder characterized by selective degeneration of 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0014804281480155<>ScoreDetail__5468|IGFALS|0.00041031399818598__11179|SOD1|0.0014804281480155__ 0 0 0 0 0 199198 12843244 266723 20996 11179 SOD1 ALS ALS 62 3.2 (SOD1) SOD1 are causally responsible for a subset of familial ALS (FALS) FALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0014804281480155<>ScoreDetail__5468|IGFALS|0.00041031399818598__11179|SOD1|0.0014804281480155__ 0 0 0 0 0 199201 12843244 266724 20996 11179 SOD1 ALS ALS 31 3.2 degeneration with cellular pathological features similar to that of human ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0014804281480155<>ScoreDetail__5468|IGFALS|0.00041031399818598__11179|SOD1|0.0014804281480155__ 0 0 0 0 0 199202 12843244 266725 20996 11179 SOD1 ALS ALS 14 3.2 apoptosis as a possible mechanism for motor neuron degeneration in ALS (Friedlander Friedlander et al. 1997 Kostic et al. 1997 Li 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0014804281480155<>ScoreDetail__5468|IGFALS|0.00041031399818598__11179|SOD1|0.0014804281480155__ 0 0 0 0 0 199204 12843244 266727 20996 11179 SOD1 ALS ALS 14 3.2 caspase-3 in the spinal cords of mutant SOD1 mice and ALS patients has been reported previously (Martin, Martin 1999 Li et 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0014804281480155<>ScoreDetail__5468|IGFALS|0.00041031399818598__11179|SOD1|0.0014804281480155__ 0 0 0 0 0 199206 12843244 266729 20996 11179 SOD1 ALS ALS 48 3.2 al. 2000 suggesting the importance of caspase-mediated apoptosis in the ALS pathology 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0014804281480155<>ScoreDetail__5468|IGFALS|0.00041031399818598__11179|SOD1|0.0014804281480155__ 0 0 0 0 0 199207 12843244 266730 20996 11179 SOD1 ALS ALS 12 3.2 involvement of both caspase-1 and caspase-3 in the pathogenesis of ALS strongly suggested the involvement of caspase-11 in this process because 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0014804281480155<>ScoreDetail__5468|IGFALS|0.00041031399818598__11179|SOD1|0.0014804281480155__ 0 0 0 0 0 199211 12843244 266733 20996 11179 SOD1 ALS ALS 20 3.2 beneficial effect of general caspase inhibition in mouse models of ALS a critical role of individual caspases in mutant SOD1-mediated neurodegeneration 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0014804281480155<>ScoreDetail__5468|IGFALS|0.00041031399818598__11179|SOD1|0.0014804281480155__ 0 0 0 0 0 199213 12843244 266734 20996 11179 SOD1 ALS ALS 23 3.2 resulting apoptosis play an indispensable role in mediating neurodegeneration in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0014804281480155<>ScoreDetail__5468|IGFALS|0.00041031399818598__11179|SOD1|0.0014804281480155__ 0 0 0 0 0 199218 12843244 266749 19573 10691 SDS SDS SDS 34 0.0 buffer (150 150 m M NaCl 1% Triton X-100 0.1% SDS and 1% sodium deoxycholate in 50 m M Tris-HCl pH 1 JUMiner_v2.2 1 0 0 2 10691 TotalCon:2<>10691|SDS|10993|Complete__19440|SBDS|51119|Complete__<>AvaiableGeneRif=2<>BEST:10691|SDS|0.000327439423706614<>ScoreDetail__10691|SDS|0.000327439423706614__19440|SBDS|0.000304380309361078__ 0 0 0 0 0 199220 12843244 266765 20996 11179 SOD1 ALS ALS 31 3.2 the disease onset and progression of this mouse model of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0014804281480155<>ScoreDetail__5468|IGFALS|0.00041031399818598__11179|SOD1|0.0014804281480155__ 0 0 0 0 0 199221 12843244 266767 20996 11179 SOD1 ALS ALS 33 3.2 is not crucial for neurodegeneration in this mouse model of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0014804281480155<>ScoreDetail__5468|IGFALS|0.00041031399818598__11179|SOD1|0.0014804281480155__ 0 0 0 0 0 199226 12843244 266770 20996 11179 SOD1 ALS ALS 21 3.2 targets for the treatment of chronic neurodegenerative diseases such as ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0014804281480155<>ScoreDetail__5468|IGFALS|0.00041031399818598__11179|SOD1|0.0014804281480155__ 0 0 0 0 0 199239 12843244 266779 20996 11179 SOD1 ALS ALS 6 3.2 It has been well documented that ALS motor neurons undergo vacuolarization of the rough endoplasmic reticulum and 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0014804281480155<>ScoreDetail__5468|IGFALS|0.00041031399818598__11179|SOD1|0.0014804281480155__ 0 0 0 0 0 199241 12843244 266782 20996 11179 SOD1 ALS ALS 12 3.2 weak protection by Bcl-2 overexpression in a mouse model of ALS (Kostic Kostic et al. 1997 suggests an involvement of alternative 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0014804281480155<>ScoreDetail__5468|IGFALS|0.00041031399818598__11179|SOD1|0.0014804281480155__ 0 0 0 0 0 199243 12843244 266789 20996 11179 SOD1 ALS ALS 10 3.2 The exact parallels between SOD1 mutant transgenic mice and human ALS are not clear because of the difference in the temporal 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0014804281480155<>ScoreDetail__5468|IGFALS|0.00041031399818598__11179|SOD1|0.0014804281480155__ 0 0 0 0 0 199244 12843244 266790 20996 11179 SOD1 ALS ALS 12 3.2 activation of caspases and apoptosis in this mouse model of ALS may reflect a secondary degenerative response it remains to be 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0014804281480155<>ScoreDetail__5468|IGFALS|0.00041031399818598__11179|SOD1|0.0014804281480155__ 0 0 0 0 0 199245 12843244 266790 20996 11179 SOD1 ALS ALS 35 3.2 inhibition of selective caspases may be beneficial for treatment of ALS in human 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0014804281480155<>ScoreDetail__5468|IGFALS|0.00041031399818598__11179|SOD1|0.0014804281480155__ 0 0 0 0 0 199246 12843244 266791 20996 11179 SOD1 ALS ALS 8 3.2 In particular considering that onset and progression of ALS in humans occur over a much longer period of time 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0014804281480155<>ScoreDetail__5468|IGFALS|0.00041031399818598__11179|SOD1|0.0014804281480155__ 0 0 0 0 0 199247 12843244 266792 20996 11179 SOD1 ALS ALS 18 3.2 considering caspases as a direct therapeutic target for treatment of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0014804281480155<>ScoreDetail__5468|IGFALS|0.00041031399818598__11179|SOD1|0.0014804281480155__ 0 0 0 0 0 199248 12843244 266801 536 387 AKR1C4 C11 C11 18 0.0 cord lysates were prepared from caspase-11+/-; caspase-11 - G93A (C11+/-G93A), C11 -G93A caspase-11-/-; caspase-11- - G93A (C11-/-G93A), C11- -G93A and caspase-11 1 JUMiner_v2.2 1 0 0 2 387 TotalCon:2<>387|AKR1C4|1109|Complete__14121|POLR3K|51728|Complete__<>AvaiableGeneRif=2<>BEST:387|AKR1C4|0.000418929850918756<>ScoreDetail__14121|POLR3K|0.000417485265225933__387|AKR1C4|0.000418929850918756__ 0 0 0 0 0 199249 12843244 266801 536 387 AKR1C4 C11 C11- 21 0.0 - G93A (C11+/-G93A), C11 -G93A caspase-11-/-; caspase-11- - G93A (C11-/-G93A), C11- -G93A and caspase-11 - C11 - mice 1 JUMiner_v2.2 1 0 0 2 387 TotalCon:2<>387|AKR1C4|1109|Complete__14121|POLR3K|51728|Complete__<>AvaiableGeneRif=2<>BEST:387|AKR1C4|0.000418929850918756<>ScoreDetail__14121|POLR3K|0.000417485265225933__387|AKR1C4|0.000418929850918756__ 0 0 0 0 0 199250 12843244 266801 536 387 AKR1C4 C11 C11 23 0.0 caspase-11-/-; caspase-11- - G93A (C11-/-G93A), C11- -G93A and caspase-11 - C11 - mice 1 JUMiner_v2.2 1 0 0 2 387 TotalCon:2<>387|AKR1C4|1109|Complete__14121|POLR3K|51728|Complete__<>AvaiableGeneRif=2<>BEST:387|AKR1C4|0.000418929850918756<>ScoreDetail__14121|POLR3K|0.000417485265225933__387|AKR1C4|0.000418929850918756__ 0 0 0 0 0 193304 14511332 258337 20996 11179 SOD1 ALS ALS 20 3.2 motor neurons in a model of amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193306 14511332 258338 20996 11179 SOD1 ALS ALS-like 15 2.9 shown to be increased in transgenic mice that produce an ALS-like syndrome 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193310 14511332 258339 20996 11179 SOD1 ALS ALS 17 3.2 and COX-2 in the spinal cord of seven human sporadic ALS patients by means of immunohistochemistry 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193312 14511332 258341 20996 11179 SOD1 ALS ALS 12 3.2 was dramatically increased in the spinal cord of patients with ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193314 14511332 258343 20996 11179 SOD1 ALS ALS 10 3.2 Statistical analysis showed a significantly higher expression of COX-2 in ALS for both neurons and glia 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193316 14511332 258344 20996 11179 SOD1 ALS ALS 18 3.2 microglia and no apparent difference was detected between controls and ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193318 14511332 258345 20996 11179 SOD1 ALS ALS 28 3.2 activity in the cerebrospinal fluid of nine patients diagnosed for ALS and compared the results with those from nine patients without 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193319 14511332 258346 20996 11179 SOD1 ALS ALS 8 3.2 PG E 2 levels were markedly increased in ALS cases (45.8 45.8 _amp_plusmn 35.1 pg/mL) pg mL compared to 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193321 14511332 258347 20996 11179 SOD1 ALS ALS 19 3.2 for COX-2 in the pathogenesis of motor neuron death in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193323 14511332 258348 20996 11179 SOD1 ALS ALS 14 3.2 therefore offer a new possibility in the treatment of human ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193325 14511332 258349 20996 11179 SOD1 ALS ALS 10 3.2 However to determine the exact role of COX-2 in human ALS will require further research 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193327 14511332 258352 20996 11179 SOD1 ALS ALS 18 3.2 superoxide dismutase (SOD1) SOD1 account for a familial form of ALS linked to chromosome 21q ( Rosen et al . 1993 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193342 14511332 258362 20996 11179 SOD1 ALS ALS 1 3.2 In ALS glutamatergic excitotoxicity was shown to contribute to motoneuron-death ( Fray 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193343 14511332 258363 20996 11179 SOD1 ALS ALS 9 3.2 Glutamate levels are elevated in the cerebrospinal fluid of ALS patients and inhibition of glial glutamate uptake has been used 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193344 14511332 258363 20996 11179 SOD1 ALS ALS 26 3.2 uptake has been used as an in vitro model for ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193348 14511332 258366 20996 11179 SOD1 ALS ALS 17 3.2 (PG PG E 2 level in post mortem samples of ALS cases as a marker for COX-2 activity 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193357 14511332 258371 20996 11179 SOD1 ALS ALS 24 3.2 E 2 in the cerebrospinal fluid of patients diagnosed with ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193358 14511332 258374 20996 11179 SOD1 ALS ALS 12 3.2 spinal cord segment was examined in seven patients with sporadic ALS and seven age matched patients without any neurological disease 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193370 14511332 258400 19381 19440 SBDS SDS SDS-polyacrylamide 12 0.3 50 _amp_micro;g/lane) _amp_micro g lane was loaded on a 10% SDS-polyacrylamide gel and electroblotted onto nitrocellulose membranes (Schleicher Schleicher and Schuell 11 JUMiner_v2.2 1 2 sds 0 2 10691 TotalCon:2<>10691|SDS|10993|Complete__19440|SBDS|51119|Complete__<>AvaiableGeneRif=2<>BEST:10691|SDS|0.00047941921786179<>ScoreDetail__10691|SDS|0.00047941921786179__19440|SBDS|0.000459162067811292__ 0 0 0 0 0 193373 14511332 258402 3778 10620 CCL21 ECL ECL 6 0.0 Blots were developed with enhanced chemiluminescence (ECL) ECL detection reagents (Amersham, Amersham Arlington Heights IL and exposed to 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 193374 14511332 258405 20996 11179 SOD1 ALS ALS 5 3.2 Nine patients with clinically definite ALS were studied 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193375 14511332 258406 20996 11179 SOD1 ALS ALS 0 3.2 ALS was diagnosed on the basis of the El Escorial Criteria 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193376 14511332 258406 20996 11179 SOD1 ALS ALS 16 3.2 the El Escorial Criteria (World World Federation of Neurology of ALS ( Brooks 1994 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193377 14511332 258411 11629 6493 LAMC2 CSF CSF 3 0.0 The cerebrospinal fluid (CSF) CSF control group ( n = 9 consisted of patients with 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 193378 14511332 258412 11629 6493 LAMC2 CSF CSF 4 0.0 These specimens had normal CSF parameters i.e absence of pleocytosis intrathecal production of immunoglobulins and 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 193379 14511332 258414 11629 6493 LAMC2 CSF CSF 0 0.0 CSF was obtained at routine lumbar puncture for diagnostic purposes after 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 193413 14511332 258449 11629 6493 LAMC2 CSF CSF 21 0.0 sALS cases The individual concentrations of PG E 2 in CSF along with the means and standard deviations are shown for 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 193417 14511332 258458 11629 6493 LAMC2 CSF CSF 8 0.0 Fourthly higher PG-E 2 levels were found in CSF specimens of sALS patients compared to controls 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 193421 14511332 258461 20996 11179 SOD1 ALS ALS 1 3.2 Regarding ALS Drachman and Rothstein ( Drachman _amp_ Rothstein 2000 demonstrated a 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193427 14511332 258464 20996 11179 SOD1 ALS ALS 16 3.2 beneficial effect of selective COX-2 inhibition in mouse models of ALS ( Drachman et al . 2002 Pompl et al . 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193436 14511332 258472 11629 6493 LAMC2 CSF CSF 16 0.0 interplay with glutamate levels of which are elevated in the CSF of sALS patients ( Plaitakis et al . 1988 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 193443 14511332 258477 20996 11179 SOD1 ALS ALS 16 3.2 expression and their concentrations are elevated in the CSF of ALS cases ( Sekizawa et al . 1998 Vane et al 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193444 14511332 258477 11629 6493 LAMC2 CSF CSF 14 0.1 of COX-2 expression and their concentrations are elevated in the CSF of ALS cases ( Sekizawa et al . 1998 Vane 6 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 193449 14511332 258480 20996 11179 SOD1 ALS ALS 7 3.2 Gliosis is a common histological hallmark of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193457 14511332 258487 20996 11179 SOD1 ALS ALS 30 3.2 and an active involvement of interneurons in the pathology of ALS ( Rowland _amp_ Shneider 2001 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193463 14511332 258491 20996 11179 SOD1 ALS ALS 17 3.2 tissues and that previously obtained in an experimental model of ALS in the mouse are in excellent agreement 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193464 14511332 258497 20996 11179 SOD1 ALS ALS 10 3.2 Despite a significant reduction in the number of neurons in ALS specimens the proportion of motoneurons and interneurons was virtually the 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193473 14511332 258503 20996 11179 SOD1 ALS ALS 17 3.2 situ expression of both COX-1 and COX-2 proteins in human ALS spinal cords 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193475 14511332 258505 20996 11179 SOD1 ALS ALS 14 3.2 necessary data regarding the expression of COX isoforms in human ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193476 14511332 258506 20996 11179 SOD1 ALS ALS 19 3.2 of PG-E 2 in the CSF of patients diagnosed for ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193477 14511332 258506 11629 6493 LAMC2 CSF CSF 14 0.0 were confirmed by the measurement of PG-E 2 in the CSF of patients diagnosed for ALS 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 193478 14511332 258507 20996 11179 SOD1 ALS ALS 8 3.2 PG-E 2 levels were significantly increased in the ALS group 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193483 14511332 258513 20996 11179 SOD1 ALS ALS 8 3.2 What is the significance of COX-2 overexpression in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193485 14511332 258514 20996 11179 SOD1 ALS ALS 16 3.2 that COX-2 might play a role in the pathogenesis of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193487 14511332 258515 20996 11179 SOD1 ALS ALS 14 3.2 selective COX-2 inhibitor in an in vitro organotypic model of ALS protected against the loss of motor neurons in this system 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193489 14511332 258516 20996 11179 SOD1 ALS ALS 30 3.2 neuron degeneration and prolonged survival in transgenic mouse models of ALS ( Drachman et al . 2002 Pompl et al . 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193491 14511332 258517 20996 11179 SOD1 ALS ALS 13 3.2 the action of PGs COX-2 could promote inflammatory processes in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193492 14511332 258518 20996 11179 SOD1 ALS ALS 7 3.2 Although classical cellular inflammation is absent in ALS there is mounting evidence that inflammatory related processes may be 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193494 14511332 258520 20996 11179 SOD1 ALS ALS 17 3.2 role in glutamate excitotoxicity which is postulated to occur in ALS ( Rowland _amp_ Shneider 2001 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193503 14511332 258531 20996 11179 SOD1 ALS ALS 7 3.2 However the specifity of COX-2 expression for ALS has to be questioned 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193506 14511332 258533 20996 11179 SOD1 ALS ALS 24 3.2 common endpoint in neurodegeneration rather than the actual cause of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193513 14511332 258538 20996 11179 SOD1 ALS ALS 23 3.2 the exact role of COX-2 in the pathogenesis of human ALS still remains to be elucidated 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193514 14511332 258539 20996 11179 SOD1 ALS ALS 9 3.2 Clinical trials are underway in the United States (North-east North-east ALS consortium to test a potential benefit of selective COX-2 inhibition 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193516 14511332 258539 20996 11179 SOD1 ALS ALS 22 3.2 test a potential benefit of selective COX-2 inhibition in human ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193523 14511332 258546 20996 11179 SOD1 ALS ALS 24 3.2 a minor role for this isoform in the pathogenesis of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193529 14511332 258552 20996 11179 SOD1 ALS ALS 12 3.2 the beneficial effects of selective COX-2 inhibition in models of ALS the results of this and other studies might give a 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193531 14511332 258556 20996 11179 SOD1 ALS ALS 0 3.2 ALS amyotrophic lateral sclerosis COX cyclooxygenase CSF cerebrospinal fluid GFAP glial 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000844058375623846<>ScoreDetail__5468|IGFALS|0.000553428263731004__11179|SOD1|0.000844058375623846__ 0 0 0 0 0 193535 14511332 258556 11629 6493 LAMC2 CSF CSF 6 0.1 ALS amyotrophic lateral sclerosis COX cyclooxygenase CSF cerebrospinal fluid GFAP glial fibrillary acidic protein IR immunoreactivity PG 6 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 195581 14556941 260922 20996 11179 SOD1 ALS ALS 12 0.0 that riluzole a drug used in amyotrophic lateral sclerosis (ALS), ALS might be beneficial for the treatment of MS 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00106563979929848<>ScoreDetail__5468|IGFALS|0.000359823172612316__11179|SOD1|0.00106563979929848__ 0 0 0 0 0 195582 14556941 260934 11629 6493 LAMC2 CSF CSF 11 0.3 Moreover Stover et al 46 demonstrated an increase in CSF glutamate levels in MS patients which correlated with the severity 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 195583 14556941 260936 20996 11179 SOD1 ALS ALS 11 0.0 hypothesis in neurodegenerative diseases such as amyotrophic lateral sclerosis (ALS) ALS suggests that anti-glutamatergic agents might be neuroprotective 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00106563979929848<>ScoreDetail__5468|IGFALS|0.000359823172612316__11179|SOD1|0.00106563979929848__ 0 0 0 0 0 195584 14556941 260937 20996 11179 SOD1 ALS ALS 20 0.0 to be protective in several models of neurodegenerative diseases including ALS 19 and 20 Parkinson_amp_#x2019 s 1 3 5 9 and 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00106563979929848<>ScoreDetail__5468|IGFALS|0.000359823172612316__11179|SOD1|0.00106563979929848__ 0 0 0 0 0 195585 14556941 260941 20996 11179 SOD1 ALS ALS 18 0.0 was approved by the US Food and Drug Administration for ALS therapy 8 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00106563979929848<>ScoreDetail__5468|IGFALS|0.000359823172612316__11179|SOD1|0.00106563979929848__ 0 0 0 0 0 195590 14556941 260993 4863 2311 CPM CPM CPM 16 0.0 H -thymidine incorporation expressed as mean counts per minute (CPM) CPM of triplicate wells 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 195616 14556941 261053 20996 11179 SOD1 ALS ALS 42 0.0 Parkinson_amp_#x2019 s disease 1 3 5 9 and 10 and ALS 19 and 20 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00106563979929848<>ScoreDetail__5468|IGFALS|0.000359823172612316__11179|SOD1|0.00106563979929848__ 0 0 0 0 0 195617 14556941 261055 11629 6493 LAMC2 CSF CSF 9 0.3 However based on several previous studies showing that the CSF glutamate levels are increased in MS patients 2 and that 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 196768 14597108 262716 20996 11179 SOD1 ALS ALS 17 1.4 inflammation contributes to the pathogenesis of amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196771 14597108 262718 20996 11179 SOD1 ALS ALS 11 1.4 studied MCP-1 levels in sera and cerebrospinal fluid of 29 ALS patients and compared the results with 11 control patients with 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196774 14597108 262720 20996 11179 SOD1 ALS ALS 18 1.4 but not serum level was seen in the patients with ALS compared to the control subjects 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196776 14597108 262721 20996 11179 SOD1 ALS ALS 16 1.4 MCP-1 activity may be a sensitive marker for neuroinflammation in ALS useful for monitoring treatment trials in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196777 14597108 262721 20996 11179 SOD1 ALS ALS 23 1.4 for neuroinflammation in ALS useful for monitoring treatment trials in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196778 14597108 262725 20996 11179 SOD1 ALS ALS 3 1.4 Amyotrophic lateral sclerosis (ALS) ALS is a progressive fatal neurodegenerative disorder that primarily affects motor 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196779 14597108 262726 20996 11179 SOD1 ALS ALS 3 1.4 The cause of ALS is not completely understood but accumulating evidence indicates that inflammatory 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196781 14597108 262727 20996 11179 SOD1 ALS ALS 43 1.4 the superoxide dismutase gene (SOD1), SOD1 an animal model of ALS Alexianu et al. 2001 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196782 14597108 262728 20996 11179 SOD1 ALS ALS 17 1.4 mortem in cerebral cortex and spinal cord of patients with ALS Kawamata et al. 1992 and Troost et al. 1990 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196783 14597108 262729 20996 11179 SOD1 ALS ALS 58 1.4 been demonstrated in the cerebrospinal fluid and spinal cord of ALS patients (for for review see McGeer and McGeer 2002 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196784 14597108 262730 20996 11179 SOD1 ALS ALS 31 1.4 is neuroprotective in mutant superoxide dismutase transgenic mouse models of ALS Kriz et al. 2002 Van Den Bosch et al. 2002 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196788 14597108 262735 20996 11179 SOD1 ALS ALS 7 1.4 Changes in MCP-1 in living patients with ALS have not been studied however its evaluation might aid in 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196789 14597108 262736 20996 11179 SOD1 ALS ALS 18 1.4 might furthermore offer a possible treatment option for patients with ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196791 14597108 262737 20996 11179 SOD1 ALS ALS 15 1.4 the MCP-1 level in CSF and serum of patients with ALS with that in controls 2 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196792 14597108 262737 11629 6493 LAMC2 CSF CSF 9 0.0 Therefore the present study compares the MCP-1 level in CSF and serum of patients with ALS with that in controls 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 196793 14597108 262740 20996 11179 SOD1 ALS ALS 9 1.4 Experimental and control groups were matched for age 29 ALS patients (mean mean age 61.6_amp_#xb1 12.5 years and 11 individuals 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196794 14597108 262741 20996 11179 SOD1 ALS ALS 1 1.4 All ALS patients had been diagnosed with definite or probable ALS in 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196795 14597108 262741 20996 11179 SOD1 ALS ALS 10 1.4 All ALS patients had been diagnosed with definite or probable ALS in accordance with the revised El Escorial criteria Brooks et 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196796 14597108 262742 20996 11179 SOD1 ALS ALS 3 1.4 Seven of the ALS patients had predominant bulbar signs and 22 had only spinal 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196797 14597108 262744 11629 6493 LAMC2 CSF CSF 17 0.0 been given to patients with tension headaches before blood and CSF sampling 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 196798 14597108 262746 11629 6493 LAMC2 CSF CSF 0 0.0 CSF/serum CSF serum preparation 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 196799 14597108 262747 11629 6493 LAMC2 CSF CSF 0 0.0 CSF and serum samples of patients and controls were obtained with 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 196800 14597108 262747 11629 6493 LAMC2 CSF CSF 23 0.0 as part of the diagnostic evaluation and stored in the CSF banks of the Department of Neurology MHH Hannover and the 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 196801 14597108 262748 20996 11179 SOD1 ALS ALS 17 1.4 the CSF were within normal range in both patients with ALS and controls 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196802 14597108 262748 11629 6493 LAMC2 CSF CSF 8 0.0 Cells counts and the protein concentration in the CSF were within normal range in both patients with ALS and 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 196803 14597108 262749 11629 6493 LAMC2 CSF CSF 0 0.0 CSF samples were centrifuged immediately after lumbar puncture at 250_amp_#xd7 g 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 196805 14597108 262751 11629 6493 LAMC2 CSF CSF 5 0.0 MCP-1 levels in serum and CSF samples were quantified by ELISA (Quantikine Quantikine R_amp_#x26 D Systems 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 196806 14597108 262751 12473 20867 MCHR2 SLT SLT 33 0.0 of 450 nm (reference reference wavelength 550 nm with a SLT Reader 340 ATTC 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 196808 14597108 262756 20996 11179 SOD1 ALS ALS 15 1.4 used to compare MCP-1 levels in CSF and serum in ALS patients with controls 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196809 14597108 262756 11629 6493 LAMC2 CSF CSF 11 0.0 Whitney U -test was used to compare MCP-1 levels in CSF and serum in ALS patients with controls 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 196812 14597108 262761 20996 11179 SOD1 ALS ALS 12 1.4 of MCP-1 was significantly ( p _amp_#x3c 0.001 higher in ALS patients (570.5_amp_#xb1;199.9 570.5_amp_#xb1 199.9 pg/ml) pg ml as compared to 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196813 14597108 262761 11629 6493 LAMC2 CSF CSF 1 0.0 The CSF concentration of MCP-1 was significantly ( p _amp_#x3c 0.001 higher 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 196814 14597108 262762 20996 11179 SOD1 ALS ALS 9 1.4 Although an overlap of values was seen among the ALS group MCP-1 values of only 8 patients of 29 were 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196817 14597108 262763 20996 11179 SOD1 ALS ALS 4 1.4 Furthermore MCP-1 levels in ALS patients (570.5_amp_#xb1;199.9 570.5_amp_#xb1 199.9 pg/ml) pg ml were substantially higher 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196818 14597108 262763 11629 6493 LAMC2 CSF CSF 13 0.0 570.5_amp_#xb1 199.9 pg/ml) pg ml were substantially higher in the CSF ( p _amp_#x3c 0.001 than in the serum (191.6_amp_#xb1;104.9 191.6_amp_#xb1 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 196819 14597108 262764 20996 11179 SOD1 ALS ALS 17 1.4 expression in the serum or CSF of patients with definite ALS compared with patients with probable ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196820 14597108 262764 20996 11179 SOD1 ALS ALS 23 1.4 of patients with definite ALS compared with patients with probable ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196821 14597108 262764 11629 6493 LAMC2 CSF CSF 12 0.0 no differential pattern of chemokine expression in the serum or CSF of patients with definite ALS compared with patients with probable 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 196824 14597108 262766 20996 11179 SOD1 ALS ALS 20 1.4 at time of lumbar puncture and intrathecal MCP-1 level in ALS patients ( r =0.045 Fig 1a or control patients ( 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196825 14597108 262768 20996 11179 SOD1 ALS ALS 24 1.4 as well as in the spinal cord of patients with ALS Kawamata et al. 1992 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196826 14597108 262770 20996 11179 SOD1 ALS ALS 16 1.4 the recruitment of microglial cells into the spinal cord of ALS patients have remained elusive so far 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196828 14597108 262771 20996 11179 SOD1 ALS ALS 21 1.4 mediate recruitment of myelomonocytic cells to areas of neurodegeneration in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196830 14597108 262772 20996 11179 SOD1 ALS ALS 15 1.4 vivo evidence for elevated cerebrospinal fluid levels of MCP-1 in ALS patients providing further evidence for the hypothesis that inflammatory processes 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196831 14597108 262772 20996 11179 SOD1 ALS ALS 30 1.4 for the hypothesis that inflammatory processes contribute to neurodegeneration in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196833 14597108 262773 20996 11179 SOD1 ALS ALS 16 1.4 the CSF than in paired serum samples in patients with ALS provide evidence for intrathecal synthesis of this chemokine 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196834 14597108 262773 11629 6493 LAMC2 CSF CSF 7 0.0 The higher levels of MCP-1 in the CSF than in paired serum samples in patients with ALS provide 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 196837 14597108 262776 20996 11179 SOD1 ALS ALS 8 1.4 Neuropathological studies show that in animal models of ALS glial reactions even precede neuronal loss in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196838 14597108 262776 20996 11179 SOD1 ALS ALS 16 1.4 models of ALS glial reactions even precede neuronal loss in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196840 14597108 262777 20996 11179 SOD1 ALS ALS 13 1.4 speculate that MCP-1 might further increase during the course of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196843 14597108 262779 11629 6493 LAMC2 CSF CSF 13 0.2 correlation between clinical impairment/progression impairment progression of the disease and CSF MCP-1 levels a larger sample size may be needed to 5 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 196844 14597108 262780 20996 11179 SOD1 ALS ALS 19 1.4 explore the potential of immunotherapies specifically targeting MCP-1-dependant mechanisms in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196845 14597108 262780 3892 6953 CD46 MCP MCP-1-dependant 16 0.0 be interesting to explore the potential of immunotherapies specifically targeting MCP-1-dependant mechanisms in ALS 11 JUMiner_v2.2 1 0 0 2 6953 TotalCon:3<>6953|CD46|4179|Complete__1474|CAPG|822|Complete__32018|C1orf132|388732|No_GeneRif__<>AvaiableGeneRif=2<>BEST:6953|CD46|0.000506737674493666<>ScoreDetail__6953|CD46|0.000506737674493666__1474|CAPG|0.000485731633272617__ 0 0 0 0 0 196849 14597108 262784 20996 11179 SOD1 ALS ALS 24 1.4 marker in the diagnosis or in treatment of patients with ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196850 14597108 262784 11629 6493 LAMC2 CSF CSF 8 0.0 The present data suggest that MCP-1 levels in CSF may be an appropriate surrogate marker in the diagnosis or 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 196852 14597108 262785 20996 11179 SOD1 ALS ALS 15 1.4 the prognostic value of CSF/plasma CSF plasma MCP-1 ratios in ALS patients who are followed longitudinally which should be done in 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 196853 14597108 262785 11629 6493 LAMC2 CSF CSF 11 0.2 would be worthwhile to examine the prognostic value of CSF/plasma CSF plasma MCP-1 ratios in ALS patients who are followed longitudinally 5 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 196855 14597108 262787 20996 11179 SOD1 ALS ALS 14 1.4 the time of lumbar puncture and intrathecal MCP-1 levels in ALS patients (a) a and control patients (b) b 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00087402263009945<>ScoreDetail__5468|IGFALS|0.00087402263009945__11179|SOD1|0.000743974127739445__ 0 0 0 0 0 186758 14642384 249791 22000 11730 TERT TERT tert 8 0.0 FDNB GSH GSSG iodoacetic acid (IA), IA N-ethylmaleimide (NEM), NEM tert -butyl hydroperoxide (t-BOOH), t-BOOH and trichloroacetic acid (TCA) TCA were 14 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 186759 14642384 249798 22000 11730 TERT TERT tert 3 0.0 Then 1 mM tert -butyl hydroperoxide (t-BOOH) t-BOOH treatment was performed on heparinized blood 14 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 186761 14642384 249888 16561 8947 PI3 ESI ESI-MS_amp_#x2014 10 0.0 disulfide HPLC_amp_#x2014 high-pressure liquid chromatography IA_amp_#x2014 iodoacetic acid LC/ESI-MS_amp_#x2014;liquid LC ESI-MS_amp_#x2014 liquid chromatography/electron chromatography electron spray ionization-mass spectrometry NEM_amp_#x2014 N-ethylmaleimide t-BOOH_amp_#x2014 11 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 186762 14642384 249888 22000 11730 TERT TERT tert 17 0.0 liquid chromatography/electron chromatography electron spray ionization-mass spectrometry NEM_amp_#x2014 N-ethylmaleimide t-BOOH_amp_#x2014 tert -butylhydroperoxide TCA_amp_#x2014 trichloroacetic acid 14 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 187086 14645737 250134 9947 5468 IGFALS ALS ALS 5 0.3 Molecular signature of late-stage human ALS revealed by expression profiling of postmortem spinal cord gray matter 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00132105505278114<>ScoreDetail__5468|IGFALS|0.000868960722975322__11179|SOD1|0.00132105505278114__ 0 0 0 0 0 187087 14645737 250135 9947 5468 IGFALS ALS ALS 16 0.3 patterns in the human neurodegenerative disease amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00132105505278114<>ScoreDetail__5468|IGFALS|0.000868960722975322__11179|SOD1|0.00132105505278114__ 0 0 0 0 0 187088 14645737 250136 9947 5468 IGFALS ALS ALS 27 0.3 in postmortem spinal cord gray matter obtained from individuals with ALS as well as normal individuals 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00132105505278114<>ScoreDetail__5468|IGFALS|0.000868960722975322__11179|SOD1|0.00132105505278114__ 0 0 0 0 0 187089 14645737 250137 9947 5468 IGFALS ALS ALS-specific 12 0.3 (FDA) FDA and leave-one-out cross-validation (LOOCV), LOOCV we discerned an ALS-specific signature 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00132105505278114<>ScoreDetail__5468|IGFALS|0.000868960722975322__11179|SOD1|0.00132105505278114__ 0 0 0 0 0 187090 14645737 250138 9947 5468 IGFALS ALS ALS 7 0.3 Moreover it was possible to distinguish familial ALS (FALS) FALS from sporadic ALS (SALS) SALS gene expression profiles 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00132105505278114<>ScoreDetail__5468|IGFALS|0.000868960722975322__11179|SOD1|0.00132105505278114__ 0 0 0 0 0 187091 14645737 250138 9947 5468 IGFALS ALS ALS 11 0.3 was possible to distinguish familial ALS (FALS) FALS from sporadic ALS (SALS) SALS gene expression profiles 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00132105505278114<>ScoreDetail__5468|IGFALS|0.000868960722975322__11179|SOD1|0.00132105505278114__ 0 0 0 0 0 187092 14645737 250139 9947 5468 IGFALS ALS ALS 8 0.3 Characterization of the specific genes significantly altered in ALS uncovered a pro-inflammatory terminal state 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00132105505278114<>ScoreDetail__5468|IGFALS|0.000868960722975322__11179|SOD1|0.00132105505278114__ 0 0 0 0 0 187093 14645737 250141 9947 5468 IGFALS ALS ALS 26 0.3 phenotypic changes that underlie the terminal stages of neurodegeneration in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00132105505278114<>ScoreDetail__5468|IGFALS|0.000868960722975322__11179|SOD1|0.00132105505278114__ 0 0 0 0 0 188367 14661102 251394 16315 30012 PDF PDF PDF 2 0.5 Contribution in PDF 3 JUMiner_v2.2 1 2 UserEdit 0 2 30142 TotalCon:3<>30012|PDF|64146|Complete__30142|GDF15|9518|Complete__8866|PFDN1|5201|Complete__<>AvaiableGeneRif=3<>BEST:30142|GDF15|0.000422092041646415<>ScoreDetail__8866|PFDN1|0__30142|GDF15|0.000422092041646415__30012|PDF|0.000368188512518409__ 1 1 0 0 0 190248 14720207 253624 20996 11179 SOD1 ALS ALS 14 1.4 both inflammation and mitochondrial dysfunction in amyotrophic lateral sclerosis (ALS) ALS pathogenesis 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011702678254673<>ScoreDetail__5468|IGFALS|0.000437082040298964__11179|SOD1|0.0011702678254673__ 0 0 0 0 0 190250 14720207 253625 20996 11179 SOD1 ALS ALS 24 1.4 combination with creatine in the G93A transgenic mouse model of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011702678254673<>ScoreDetail__5468|IGFALS|0.000437082040298964__11179|SOD1|0.0011702678254673__ 0 0 0 0 0 190256 14720207 253630 20996 11179 SOD1 ALS ALS 20 1.4 mechanisms may be a useful strategy in the treatment of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011702678254673<>ScoreDetail__5468|IGFALS|0.000437082040298964__11179|SOD1|0.0011702678254673__ 0 0 0 0 0 190795 14739060 254283 6981 22140 FAM20C RNS RNS 19 0.3 reactive oxygen species (ROS) ROS and reactive nitrogen species (RNS) RNS 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 190796 14739060 254283 18723 10261 ROS1 ROS ROS 14 0.0 as accountable for redox regulation involving reactive oxygen species (ROS) ROS and reactive nitrogen species (RNS) RNS 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 190797 14739060 254289 18723 10261 ROS1 ROS ROS 7 0.0 ATP synthesis is responsible for most of ROS and notably the first produced superoxide anion ( 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 190798 14739060 254290 20996 11179 SOD1 ALS ALS 35 1.3 Parkinson_amp_#x2019 s disease (PD) PD and amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00160093311530149<>ScoreDetail__5468|IGFALS|0.000534659909805198__11179|SOD1|0.00160093311530149__ 0 0 0 0 0 190799 14739060 254290 18723 10261 ROS1 ROS ROS 10 0.0 Mitochondrial dysfunction i.e cell energy impairment apoptosis and overproduction of ROS is a final common pathogenic mechanism in aging and in 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 190800 14739060 254291 6981 22140 FAM20C RNS RNS 5 0.3 Nitric oxide (NO NO an RNS which can be produced by three isoforms of NO-synthase in 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 190801 14739060 254292 20996 11179 SOD1 ALS ALS 9 1.3 The research on the genetics of inherited forms notably ALS AD PD has improved our understanding of the pathobiology of 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00160093311530149<>ScoreDetail__5468|IGFALS|0.000534659909805198__11179|SOD1|0.00160093311530149__ 0 0 0 0 0 190802 14739060 254293 6981 22140 FAM20C RNS RNS 2 0.3 ROS and RNS i.e oxidative stress are not the origin of neuronal death 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 190803 14739060 254293 18723 10261 ROS1 ROS ROS 0 0.1 ROS and RNS i.e oxidative stress are not the origin of 6 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 190804 14739060 254311 18723 10261 ROS1 ROS ROS 14 0.0 is responsible for most of the reactive oxygen species (ROS) ROS and notably the first produced superoxide anion ( in human 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 190805 14739060 254312 18723 10261 ROS1 ROS ROS 14 0.0 1_amp_#x2013 2% of the O 2 consumed is converted to ROS 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 190806 14739060 254313 6981 22140 FAM20C RNS RNS 11 0.3 is nitric oxide (NO NO a reactive nitrogen species (RNS) RNS 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 190811 14739060 254315 6981 22140 FAM20C RNS RNS 15 0.3 peroxynitrite (ONOO ONOO _amp_#x2013 _amp_#x2013 which is the most reactive RNS 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 190812 14739060 254316 6981 22140 FAM20C RNS RNS 2 0.3 ROS and RNS are the cause of oxidative stress in nervous system 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 190813 14739060 254316 18723 10261 ROS1 ROS ROS 0 0.1 ROS and RNS are the cause of oxidative stress in nervous 6 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 190816 14739060 254318 18723 10261 ROS1 ROS ROS 4 0.0 The main sources of ROS in inflammatory process are both damaged mitochondria and activated microglia 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 190817 14739060 254319 6981 22140 FAM20C RNS RNS 15 0.3 as an imbalance between generation and elimination of ROS and RNS 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 190818 14739060 254319 18723 10261 ROS1 ROS ROS 13 0.1 is described as an imbalance between generation and elimination of ROS and RNS 6 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 190820 14739060 254321 18723 10261 ROS1 ROS ROS 8 0.0 It is now recognized that redox regulation involving ROS is key to the modulation of critical cellular functions notably 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 190821 14739060 254330 6981 22140 FAM20C RNS RNS 2 0.3 ROS and RNS are involved in both apoptosis and excitotoxicity 27 and 28 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 190822 14739060 254330 18723 10261 ROS1 ROS ROS 0 0.1 ROS and RNS are involved in both apoptosis and excitotoxicity 27 6 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 190824 14739060 254346 6981 22140 FAM20C RNS RNS 10 0.3 The last three (phospholipase phospholipase A 2 produce ROS and RNS by triggering acide arachidonic cascade 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 190825 14739060 254346 18723 10261 ROS1 ROS ROS 8 0.1 The last three (phospholipase phospholipase A 2 produce ROS and RNS by triggering acide arachidonic cascade 6 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 190826 14739060 254361 6981 22140 FAM20C RNS RNS 13 0.3 result in overproduction of proteolytic enzymes lipid peroxidation ROS and RNS formation 33 and in triggering programmed cell death i.e apoptosis 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 190827 14739060 254361 18723 10261 ROS1 ROS ROS 11 0.1 intracellular responses result in overproduction of proteolytic enzymes lipid peroxidation ROS and RNS formation 33 and in triggering programmed cell death 6 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 190828 14739060 254366 6981 22140 FAM20C RNS RNS 32 0.3 as that triggered by excitotoxicity _amp_#x2022 elevated levels of ROS_amp_#x2013 RNS 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 190831 14739060 254369 18723 10261 ROS1 ROS ROS 4 0.0 When the level of ROS exceeds the capacity of the mitochondria and cell to detoxify 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 190833 14739060 254378 20996 11179 SOD1 ALS ALS 46 1.3 neurons obtained by cyclooxygenase 2_amp_#xa0 in transgenic mouse model of ALS 15 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00160093311530149<>ScoreDetail__5468|IGFALS|0.000534659909805198__11179|SOD1|0.00160093311530149__ 0 0 0 0 0 190834 14739060 254380 20996 11179 SOD1 ALS ALS 36 1.3 heterozygote gene diseases for example familial amyotrophic lateral sclerosis (ALS), ALS familial Parkinson_amp_#x2019 s disease (PD), PD familial Alzheimer_amp_#x2019 s disease 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00160093311530149<>ScoreDetail__5468|IGFALS|0.000534659909805198__11179|SOD1|0.00160093311530149__ 0 0 0 0 0 190835 14739060 254383 20996 11179 SOD1 ALS ALS 0 1.3 ALS a neurodegenerative disease characterized by the degeneration of motor neurons 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00160093311530149<>ScoreDetail__5468|IGFALS|0.000534659909805198__11179|SOD1|0.00160093311530149__ 0 0 0 0 0 190839 14739060 254384 20996 11179 SOD1 ALS ALS 15 1.3 human mutant SOD1 gene syndrome develops with many features of ALS including specific cell death of motor neurons progressive weakness and 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00160093311530149<>ScoreDetail__5468|IGFALS|0.000534659909805198__11179|SOD1|0.00160093311530149__ 0 0 0 0 0 190846 14739060 254392 20996 11179 SOD1 ALS ALS 13 1.3 peripherin is found in neuronal inclusions in patients with sporadic ALS and in transgenic mice with SOD1 mutations 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00160093311530149<>ScoreDetail__5468|IGFALS|0.000534659909805198__11179|SOD1|0.00160093311530149__ 0 0 0 0 0 190850 14739060 254398 20996 11179 SOD1 ALS ALS 12 1.3 of other neurodegenerative diseases with familial and sporadic forms like ALS display numerous similitudes 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00160093311530149<>ScoreDetail__5468|IGFALS|0.000534659909805198__11179|SOD1|0.00160093311530149__ 0 0 0 0 0 190865 14739060 254464 6981 22140 FAM20C RNS RNS 15 0.3 of aging i.e progressive damage to mtDNA by ROS/RNS ROS RNS 42 and induced changes in redox state of the cell 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 190866 14739060 254464 18723 10261 ROS1 ROS ROS 15 0.3 theory of aging i.e progressive damage to mtDNA by ROS/RNS ROS RNS 42 and induced changes in redox state of the 4 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 190867 14739060 254468 18723 10261 ROS1 ROS ROS 44 0.0 reflect either decreased mitochondrial biogenesis or turnover secondary to cumulative ROS inflicted mitochondrial damage 11 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 190869 14739060 254479 6981 22140 FAM20C RNS RNS 32 0.3 neurotoxins such as cytokine (TNF, TNF IL1 eicosanoides ROS and RNS 9 and 13 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 190871 14739060 254479 18723 10261 ROS1 ROS ROS 30 0.1 production of neurotoxins such as cytokine (TNF, TNF IL1 eicosanoides ROS and RNS 9 and 13 6 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 190873 14739060 254490 20996 11179 SOD1 ALS ALS 3 1.3 Animal models for ALS 17 and 19 AD PD 5 and aging brain 35 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00160093311530149<>ScoreDetail__5468|IGFALS|0.000534659909805198__11179|SOD1|0.00160093311530149__ 0 0 0 0 0 180857 14960605 241507 10676 6121 IRF6 LPS LPS 15 0.3 the effects of acute and chronic administration of lipopolysaccharide (LPS), LPS a Gram-negative bacterial wall component in a genetic model of 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180859 14960605 241508 10676 6121 IRF6 LPS LPS 30 0.3 challenged intraperitoneally with a single nontoxic or repeated injections of LPS (1 1 mg/kg) mg kg 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180861 14960605 241510 10676 6121 IRF6 LPS LPS 6 0.3 Remarkably only a chronic challenge with LPS in presymptomatic 6-month-old SOD1 mice exacerbated disease progression by 3 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180863 14960605 241511 10676 6121 IRF6 LPS LPS-treated 42 0.3 cord and efferent fiber tracts of the brain from the LPS-treated SOD1 mice 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180866 14960605 241519 20996 11179 SOD1 ALS ALS 27 1.7 dismutase 1 (SOD1 SOD1 linked to amyotrophic lateral sclerosis (ALS), ALS the most common form of human motor neuron disease (Nguyen 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00127141958380738<>ScoreDetail__5468|IGFALS|0.000363923721587955__11179|SOD1|0.00127141958380738__ 0 0 0 0 0 180867 14960605 241519 20996 11179 SOD1 ALS ALS 45 1.7 disease (Nguyen Nguyen et al. 2001b ~20% cases of familial ALS (Rosen Rosen et al. 1993 Cudkowicz et al. 1997 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00127141958380738<>ScoreDetail__5468|IGFALS|0.000363923721587955__11179|SOD1|0.00127141958380738__ 0 0 0 0 0 180870 14960605 241521 20996 11179 SOD1 ALS ALS 10 1.7 Transgenic mice expressing mutant SOD1 develop motor neuron disease resembling ALS through a gain of unidentified deleterious properties (Wong Wong et 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00127141958380738<>ScoreDetail__5468|IGFALS|0.000363923721587955__11179|SOD1|0.00127141958380738__ 0 0 0 0 0 180875 14960605 241523 20996 11179 SOD1 ALS ALS 11 1.7 these findings the toxicity of SOD1 mutants linked to human ALS remains poorly understood 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00127141958380738<>ScoreDetail__5468|IGFALS|0.000363923721587955__11179|SOD1|0.00127141958380738__ 0 0 0 0 0 180877 14960605 241524 20996 11179 SOD1 ALS ALS 21 1.7 that cells other than motor neurons play a role in ALS (Clement Clement et al. 2003 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00127141958380738<>ScoreDetail__5468|IGFALS|0.000363923721587955__11179|SOD1|0.00127141958380738__ 0 0 0 0 0 180880 14960605 241527 20996 11179 SOD1 ALS ALS 24 1.7 processes and activation of microglia and other immune cells in ALS patients and mice (Bruijn Bruijn et al. 1997 Nguyen et 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00127141958380738<>ScoreDetail__5468|IGFALS|0.000363923721587955__11179|SOD1|0.00127141958380738__ 0 0 0 0 0 180881 14960605 241528 20996 11179 SOD1 ALS ALS 14 1.7 compounds has recently conferred protection in models of neurodegeneration including ALS (Drachman Drachman and Rothstein 2000 Kriz et al. 2002 Schenk 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00127141958380738<>ScoreDetail__5468|IGFALS|0.000363923721587955__11179|SOD1|0.00127141958380738__ 0 0 0 0 0 180883 14960605 241531 10676 6121 IRF6 LPS LPS 17 0.3 immunity of SOD1 mice with systemic administration of lipopolysaccharide (LPS), LPS a potent activator of microglia 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180884 14960605 241532 10676 6121 IRF6 LPS LPS 11 0.3 results demonstrate that chronic activation of innate immunity by systemic LPS is noxious to motor neurons bearing SOD1 linked to ALS 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180886 14960605 241532 20996 11179 SOD1 ALS ALS 21 1.7 LPS is noxious to motor neurons bearing SOD1 linked to ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00127141958380738<>ScoreDetail__5468|IGFALS|0.000363923721587955__11179|SOD1|0.00127141958380738__ 0 0 0 0 0 180888 14960605 241534 10676 6121 IRF6 LPS LPS 7 0.3 Generation of SOD1 mice and protocol for LPS injection 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180892 14960605 241539 10676 6121 IRF6 LPS LPS 9 0.3 To avoid any potential interference with the effects of LPS mice were kept in a pathogen-free facility 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180894 14960605 241540 10676 6121 IRF6 LPS LPS 23 0.3 and 9-month-old SOD1 mice received a single intraperitoneal injection of LPS (1 1 mg/kg mg kg of body weight from Escherichia 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180896 14960605 241545 10676 6121 IRF6 LPS LPS 9 0.3 Another group of presymptomatic 6-month-old SOD1 mice received intraperitoneal LPS or vehicle injections once every 2 weeks for a duration 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180897 14960605 241546 10676 6121 IRF6 LPS LPS-treated 9 0.3 Around month 9 (42-43 42-43 weeks of age the chronically LPS-treated SOD1 mice exhibited the first signs of paralysis and the 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180902 14960605 241561 20996 11179 SOD1 ALS ALS 26 1.7 or necrosis is the dominant form of cell death in ALS (Migheli Migheli et al. 1999 Pasinelli et al. 2000 Vukosavic 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00127141958380738<>ScoreDetail__5468|IGFALS|0.000363923721587955__11179|SOD1|0.00127141958380738__ 0 0 0 0 0 180904 14960605 241562 10676 6121 IRF6 LPS LPS 12 0.3 exhibited a normal innate immune response after an acute systemic LPS injection 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180905 14960605 241563 10676 6121 IRF6 LPS LPS 3 0.3 A single systemic LPS injection caused a robust increase in the expression of Toll-like 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180911 14960605 241566 10676 6121 IRF6 LPS LPS 26 0.3 control of the innate immune response in the CNS after LPS administration 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180914 14960605 241567 20996 11179 SOD1 ALS ALS 24 1.7 genes takes place in transgenic mice expressing SOD1 linked to ALS (Nguyen Nguyen et al. 2001b 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00127141958380738<>ScoreDetail__5468|IGFALS|0.000363923721587955__11179|SOD1|0.00127141958380738__ 0 0 0 0 0 180915 14960605 241568 10676 6121 IRF6 LPS LPS 7 0.3 The results presented here demonstrate that repeated LPS injections exacerbated the pathogenesis and neuronal death processes of ALS 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180916 14960605 241568 20996 11179 SOD1 ALS ALS 17 1.7 LPS injections exacerbated the pathogenesis and neuronal death processes of ALS caused by SOD1 mutation 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00127141958380738<>ScoreDetail__5468|IGFALS|0.000363923721587955__11179|SOD1|0.00127141958380738__ 0 0 0 0 0 180919 14960605 241569 10676 6121 IRF6 LPS LPS 11 0.3 SOD1 mice responded normally to an acute systemic injection of LPS chronic stimulation of innate immune response with the bacterial cell 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180924 14960605 241572 10676 6121 IRF6 LPS LPS-treated 5 0.3 As a consequence the chronically LPS-treated SOD1 mice exhibited accelerated disease progression motor axon degeneration and 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180926 14960605 241573 10676 6121 IRF6 LPS LPS-treated 2 0.3 Interestingly chronically LPS-treated SOD1 mice exhibited a more important loss of astrocytes than 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180929 14960605 241575 20996 11179 SOD1 ALS ALS 13 1.7 compatible with a non-cell-autonomous mechanism of motor neuron death in ALS mice (Clement Clement et al. 2003 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00127141958380738<>ScoreDetail__5468|IGFALS|0.000363923721587955__11179|SOD1|0.00127141958380738__ 0 0 0 0 0 180930 14960605 241576 10676 6121 IRF6 LPS LPS 2 0.3 The endotoxin LPS is able to activate microglia because these cells are of 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180933 14960605 241578 20996 11179 SOD1 ALS ALS 14 1.7 supported by studies on human patients with neurodegenerative disorders including ALS reporting the expression of molecules of adaptive immunity such as 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00127141958380738<>ScoreDetail__5468|IGFALS|0.000363923721587955__11179|SOD1|0.00127141958380738__ 0 0 0 0 0 180936 14960605 241578 11629 6493 LAMC2 CSF CSF 43 0.3 II and human histocompatibility leukocyte antigen in brains spinal cords CSF and sera (Kriz Kriz et al. 2002 Nguyen et al. 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 180937 14960605 241579 10676 6121 IRF6 LPS LPS 15 0.3 the gene encoding IL-12 was found in the CNS of LPS treated-SOD1 mice the cerebral tissue of these animals did not 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180941 14960605 241580 10676 6121 IRF6 LPS LPS 24 0.3 spinal cord of SOD1 mice treated chronically with vehicle or LPS 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180942 14960605 241580 3870 1706 CD8A CD8 CD8 6 0.3 Immunohistochemistry also failed to detect infiltrating CD4 and CD8 cells in the brain and spinal cord of 4 JUMiner_v2.2 1 2 32 0 0 0 0 0 0 0 0 180943 14960605 241580 3870 1706 CD8A CD8 CD8 8 0.1 Immunohistochemistry also failed to detect infiltrating CD4 and CD8 cells in the brain and spinal cord of SOD1 mice 6 JUMiner_v2.2 1 2 32 0 0 0 0 0 0 0 0 180944 14960605 241581 20996 11179 SOD1 ALS ALS 24 1.7 with a specific transfer to an adaptive immune response in ALS mice 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00127141958380738<>ScoreDetail__5468|IGFALS|0.000363923721587955__11179|SOD1|0.00127141958380738__ 0 0 0 0 0 180945 14960605 241582 10676 6121 IRF6 LPS LPS-treated 28 0.3 adaptive response may be toxic for the CNS of the LPS-treated SOD1 and SOD1 mice 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180951 14960605 241586 10676 6121 IRF6 LPS LPS 2 0.3 The endotoxin LPS is able to trigger transcriptional activation of the gene encoding 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180955 14960605 241586 11629 6493 LAMC2 CSF CSF 46 0.3 and Rivest 2000 alpha levels are also found in the CSF of ALS patients (Poloni Poloni et al. 2000 kappaB pathway 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 180956 14960605 241586 20996 11179 SOD1 ALS ALS 48 1.7 2000 alpha levels are also found in the CSF of ALS patients (Poloni Poloni et al. 2000 kappaB pathway which is 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00127141958380738<>ScoreDetail__5468|IGFALS|0.000363923721587955__11179|SOD1|0.00127141958380738__ 0 0 0 0 0 180959 14960605 241592 20996 11179 SOD1 ALS ALS 7 1.7 Indeed the mechanisms that underlie 90% of ALS cases sporadic Parkinson's disease and Alzheimer's disease remain elusive (Nguyen 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00127141958380738<>ScoreDetail__5468|IGFALS|0.000363923721587955__11179|SOD1|0.00127141958380738__ 0 0 0 0 0 180960 14960605 241593 20996 11179 SOD1 ALS ALS 2 1.7 Actually sporadic ALS may result from gene-environment interactions 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00127141958380738<>ScoreDetail__5468|IGFALS|0.000363923721587955__11179|SOD1|0.00127141958380738__ 0 0 0 0 0 180961 14960605 241594 20996 11179 SOD1 ALS ALS 17 1.7 dietary glutamate-fat intake have been proposed as etiological causes for ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00127141958380738<>ScoreDetail__5468|IGFALS|0.000363923721587955__11179|SOD1|0.00127141958380738__ 0 0 0 0 0 180962 14960605 241597 20996 11179 SOD1 ALS ALS 20 1.7 infiltration of peripheral immune cells in the CNS of sporadic ALS cases have been reported (Nguyen Nguyen et al. 2002 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00127141958380738<>ScoreDetail__5468|IGFALS|0.000363923721587955__11179|SOD1|0.00127141958380738__ 0 0 0 0 0 180963 14960605 241599 10676 6121 IRF6 LPS LPS 7 0.3 Beyond the toxicity of chronic administration of LPS in the mutant SOD1 mice our study constitutes a simple 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180965 14960605 241600 20996 11179 SOD1 ALS ALS 17 1.7 bacterial infections in a wide diversity of neurodegenerative disorder including ALS we provide evidence here that environmental factors and innate immunity 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00127141958380738<>ScoreDetail__5468|IGFALS|0.000363923721587955__11179|SOD1|0.00127141958380738__ 0 0 0 0 0 180966 14960605 241604 10676 6121 IRF6 LPS LPS 6 0.3 Effect of a single bolus of LPS on TLR2 gene expression in the brains and spinal cords 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180970 14960605 241605 10676 6121 IRF6 LPS LPS 24 0.3 after a single intraperitoneal injection of vehicle (Veh) Veh or LPS (1 1 mg/kg mg kg of body weight 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180973 14960605 241610 10676 6121 IRF6 LPS LPS 25 0.3 WT and SOD1 mice that received an intraperitoneal bolus of LPS 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180974 14960605 241614 10676 6121 IRF6 LPS LPS-treated 22 0.3 main effect ( p _lt_ 0.0001 between the vehicle- and LPS-treated groups 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180975 14960605 241619 10676 6121 IRF6 LPS LPS 5 0.3 Chronic treatment with the endotoxin LPS increases the innate immune response and neurodegeneration in SOD1 mice 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180983 14960605 241630 10676 6121 IRF6 LPS LPS-treated 7 0.3 Exacerbation of motor axon degeneration in chronically LPS-treated SOD1 mice accelerates disease progression 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180986 14960605 241631 10676 6121 IRF6 LPS LPS 12 0.3 Survival curves of transgenic mice expressing SOD1 challenged systemically with LPS or vehicle every 2 weeks 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180987 14960605 241632 10676 6121 IRF6 LPS LPS-treated 4 0.3 Disease progression of chronically LPS-treated mice is exacerbated by ~3 weeks 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180988 14960605 241633 10676 6121 IRF6 LPS LPS 15 0.3 of wild-type mice is unaffected by the same dose of LPS (see see Materials and Methods 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180989 14960605 241635 10676 6121 IRF6 LPS LPS 17 0.3 from normal mice treated chronically with vehicle (WT-Veh) WT-Veh or LPS (WT-LPS) WT-LPS and from SOD1 mice challenged chronically with vehicle 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180991 14960605 241635 10676 6121 IRF6 LPS LPS 29 0.3 from SOD1 mice challenged chronically with vehicle (G37R-Veh) G37R-Veh or LPS (G37R-LPS) G37R-LPS 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 180992 14960605 241641 10676 6121 IRF6 LPS LPS-treated 9 0.3 Robust inflammatory response in ventral spinal horn of chronically LPS-treated SOD1 mice associated with massive degeneration of astrocytes 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181000 14960605 241651 10676 6121 IRF6 LPS LPS 25 0.3 wild-type littermates that received chronic systemic injections of the endotoxin LPS or sterile saline solution (Veh) Veh 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181001 14960605 241658 10676 6121 IRF6 LPS LPS-treated 10 0.3 reported as mean values (_amp_#177;SEM) _amp_#177 SEM for vehicle- and LPS-treated animals of both mouse stains 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181002 14960605 241664 10676 6121 IRF6 LPS LPS 5 0.3 Acute and chronic administration of LPS in SOD1 failed to alter expression of endogenous and transgene 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181007 14960605 241664 10676 6121 IRF6 LPS LPS 34 0.3 analyzed for SOD1 levels 24 hr after acute injection of LPS (1 1 mg/kg mg kg of body weight 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181011 14960605 241665 10676 6121 IRF6 LPS LPS 33 0.3 of SOD1 animals in response to saline (Veh) Veh or LPS injection as detected by means of an antibody recognizing both 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181016 14960605 241667 10676 6121 IRF6 LPS LPS 15 0.3 were found in WT and SOD1 mice 48 hr after LPS or Veh administration (data data not shown 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181018 14960605 241668 10676 6121 IRF6 LPS LPS 8 0.3 In SOD1 mice that were chronically treated with LPS expression of mutant SOD1 (detected detected with an antibody directed 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181021 14960605 241670 10676 6121 IRF6 LPS LPS 7 0.3 Thus neither acute nor chronic administration of LPS in SOD1 mice affected expression of endogenous and transgene SOD1 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181024 14960605 241689 19573 10691 SDS SDS SDS 14 0.0 spinal cord were obtained by homogenization in SDS-urea beta-mercaptoethanol 0.5% SDS 8 M urea in phosphate buffer pH 7.4 with a 1 JUMiner_v2.2 1 0 0 2 19440 TotalCon:2<>10691|SDS|10993|Complete__19440|SBDS|51119|Complete__<>AvaiableGeneRif=2<>BEST:19440|SBDS|0.000304534248390088<>ScoreDetail__10691|SDS|0.000200734113328745__19440|SBDS|0.000304534248390088__ 0 0 0 0 0 181028 14960605 241697 10676 6121 IRF6 LPS LPS 28 0.3 both WT and SOD1 groups of mice challenged acutely with LPS ( Fig 1 D E 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181029 14960605 241698 10676 6121 IRF6 LPS LPS-treated 9 0.3 The area postrema (AP) AP and spinal L5 segment of LPS-treated SOD1 mice did not exhibit a different hybridization signal when 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181032 14960605 241700 10676 6121 IRF6 LPS LPS 4 0.3 Chronic systemic injections of LPS exacerbate disease progression and motor axon degeneration in SOD1 mice 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181034 14960605 241701 10676 6121 IRF6 LPS LPS 10 0.3 Remarkably a chronic systemic injection of an equal dose of LPS in presymptomatic 6-month-old SOD1 mice had a significant effect on 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181037 14960605 241702 10676 6121 IRF6 LPS LPS 17 0.3 SOD1 mice (line line 29 treated chronically with Veh or LPS 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181041 14960605 241705 10676 6121 IRF6 LPS LPS 5 0.3 SOD1 mice treated chronically with LPS ( n = 13 exhibited an average life span of 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181042 14960605 241706 10676 6121 IRF6 LPS LPS 12 0.3 demonstrate that repeated intraperitoneal injections of a nontoxic dose of LPS in presymptomatic 6-month-old SOD1 mice exacerbated disease progression by 3 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181045 14960605 241707 10676 6121 IRF6 LPS LPS 39 0.3 in L5 ventral roots of SOD1 mice treated chronically with LPS or vehicle and killed at 10 months of age 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181046 14960605 241708 10676 6121 IRF6 LPS LPS-treated 8 0.3 At this age the L5 ventral roots of LPS-treated SOD1 mice were smaller when compared with those dissected from 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181048 14960605 241709 10676 6121 IRF6 LPS LPS-treated 1 0.3 Furthermore LPS-treated SOD1 mice ( n = 5 had 358 _amp_#177 48 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181052 14960605 241712 10676 6121 IRF6 LPS LPS 8 0.3 It is noteworthy that the chronic injection of LPS in WT mice did not cause neurodegeneration (1033 1033 _amp_#177 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181056 14960605 241714 10676 6121 IRF6 LPS LPS 26 0.3 proapoptotic cytokine TNF-alpha in the SOD1 mice challenged chronically with LPS 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181060 14960605 241719 10676 6121 IRF6 LPS LPS-treated 10 0.3 The innate immune response was much more pronounced in chronically LPS-treated SOD1 mice than in Veh-treated SOD1 mice (Figs Figs 3 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181065 14960605 241724 10676 6121 IRF6 LPS LPS-treated 16 0.3 FJB-positive astrocytes were found in the spinal cord of chronically LPS-treated mutant SOD1 mice ( Fig 4 B 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181067 14960605 241725 20996 11179 SOD1 ALS ALS 19 1.7 first pathological changes observed in patients and rodent models with ALS (Rothstein Rothstein et al. 1995 Bristol and Rothstein 1996 Bruijn 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00127141958380738<>ScoreDetail__5468|IGFALS|0.000363923721587955__11179|SOD1|0.00127141958380738__ 0 0 0 0 0 181068 14960605 241726 10676 6121 IRF6 LPS LPS-treated 8 0.3 Absence of adaptive immunity in the CNS of LPS-treated SOD1 mice 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181071 14960605 241728 10676 6121 IRF6 LPS LPS-treated 21 0.3 upregulation of IL-12 in degenerating CNS regions of the chronically LPS-treated SOD1 mice when compared with chronically Veh-treated SOD1 mice 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181077 14960605 241730 10676 6121 IRF6 LPS LPS-treated 25 0.3 infiltrating T cells in the CNS of both vehicle- and LPS-treated SOD1 mice (data data not shown 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181080 14960605 241732 10676 6121 IRF6 LPS LPS-treated 4 0.3 Accelerated neurodegeneration in chronically LPS-treated SOD1 mice is not attributable to an upregulation in levels 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181082 14960605 241733 10676 6121 IRF6 LPS LPS 4 0.3 Emerging evidence indicates that LPS can induce SOD1 which subsequently might play an important role 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181084 14960605 241734 10676 6121 IRF6 LPS LPS-treated 11 0.3 to the understanding of mechanisms causing accelerated neurodegeneration in chronically LPS-treated SOD1 mice is whether LPS upregulates expression of the transgene 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181086 14960605 241734 10676 6121 IRF6 LPS LPS 16 0.3 causing accelerated neurodegeneration in chronically LPS-treated SOD1 mice is whether LPS upregulates expression of the transgene SOD1 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181094 14960605 241736 10676 6121 IRF6 LPS LPS 30 0.3 SOD1 mice in response to acute or chronic injection of LPS 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181097 14960605 241737 10676 6121 IRF6 LPS LPS 23 0.3 and spleen were unchanged 24 hr after acute injection of LPS when compared with animals treated with vehicle solution (Veh) Veh 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181099 14960605 241739 10676 6121 IRF6 LPS LPS 7 0.3 In addition SOD1 mice chronically challenged with LPS did not display increased levels of both enzymes 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181100 14960605 241740 10676 6121 IRF6 LPS LPS 9 0.3 These results clearly indicate that toxicity caused by chronic LPS treatment is not caused by enhanced SOD1 expression 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 181102 14960605 241742 20996 11179 SOD1 ALS ALS 18 1.7 Health Research (CIHR) CIHR and the Robert Packard Center for ALS Research at Johns Hopkins 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00127141958380738<>ScoreDetail__5468|IGFALS|0.000363923721587955__11179|SOD1|0.00127141958380738__ 0 0 0 0 0 176355 15081582 235151 20996 11179 SOD1 ALS ALS 25 1.4 in these types of disease including amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176357 15081582 235153 20996 11179 SOD1 ALS ALS 23 1.4 potential target sites for treatments to halt the progression of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176361 15081582 235158 20996 11179 SOD1 ALS ALS 16 1.4 duality may affect future treatments for neurodegenerative diseases such as ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176362 15081582 235161 20996 11179 SOD1 ALS ALS 8 1.4 In neurodegenerative diseases such as amyotrophic lateral sclerosis (ALS), ALS neuroinflammation is a key event although the cause and significance 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176363 15081582 235168 20996 11179 SOD1 ALS ALS 18 1.4 leukocytes marginating along postcapillary venules around areas of neuroinflammation in ALS ( Engelhardt et al. 1989 and Engelhardt et al. 1993 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176365 15081582 235176 20996 11179 SOD1 ALS ALS 13 1.4 represent potential sites for treatments to curb the progression of ALS ( McGeer and McGeer 2002 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176368 15081582 235178 20996 11179 SOD1 ALS ALS 31 1.4 its impact upon the design of future treatment strategies for ALS patients 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176380 15081582 235189 10676 6121 IRF6 LPS LPS 19 0.3 cytokines interleukin (IL)-1_amp_#x3b2; IL -1_amp_#x3b2 tumor necrosis factor-TNF lipopolysaccharide (LPS), LPS phorbol ester and elevated intracellular calcium concentration 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 176396 15081582 235198 16459 8893 PGF PGF PGF 19 0.3 prostaglandin D 2 (PGD PGD 2 prostaglandin F 2 (PGF PGF 2 prostaglandin (PGI PGI 2 also known as prostacyclin and 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 176397 15081582 235198 16457 8891 PGD PGD PGD 13 0.0 prostaglandin E 2 (PGE PGE 2 prostaglandin D 2 (PGD PGD 2 prostaglandin F 2 (PGF PGF 2 prostaglandin (PGI PGI 1 JUMiner_v2.2 1 0 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 176398 15081582 235198 1647 1044 BGN PGI PGI 23 0.0 PGD 2 prostaglandin F 2 (PGF PGF 2 prostaglandin (PGI PGI 2 also known as prostacyclin and thromboxane A 2 ( 1 JUMiner_v2.2 1 0 0 2 1044 TotalCon:2<>1044|BGN|633|Complete__4458|GPI|2821|Complete__<>AvaiableGeneRif=2<>BEST:1044|BGN|0.00055137110031907<>ScoreDetail__1044|BGN|0.00055137110031907__4458|GPI|0.000443515174554901__ 0 0 0 0 0 176400 15081582 235200 20996 11179 SOD1 ALS ALS 20 1.4 free radical superoxide which may cause damage to cells in ALS and other neurodegenerative diseases ( Kaufmann et al. 1996 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176407 15081582 235205 20996 11179 SOD1 ALS ALS 8 1.4 Analysis of the expression of COX isoforms in ALS models is expected to not only determine the role of 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176408 15081582 235205 20996 11179 SOD1 ALS ALS 33 1.4 disease but also provide clues toward understanding the pathology of ALS itself 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176410 15081582 235206 20996 11179 SOD1 ALS ALS 26 1.4 understand the pathogenic and protective implications of COX activity in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176449 15081582 235244 10676 6121 IRF6 LPS LPS 6 0.3 Astrocytic COX-2 is also induced by LPS TNF basic fibroblast growth factor (bFGF), bFGF and phorbol ester 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 176455 15081582 235248 8254 4235 GFAP GFAP GFAP-positive 20 0.0 a COX-2 riboprobe revealed signal in a small proportion of GFAP-positive astrocytes ( Chang et al. 1996 11 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 176457 15081582 235249 8254 4235 GFAP GFAP GFAP 5 0.0 In addition COX-2 colocalizes with GFAP in infarcted human brains ( Sairanen et al. 1998 11 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 176466 15081582 235259 10676 6121 IRF6 LPS LPS 18 0.3 to release PGE 2 and PGD 2 in response to LPS stimulation ( Gebicke-Haerter et al. 1989 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 176467 15081582 235259 16457 8891 PGD PGD PGD 13 0.0 in culture acquire the capacity to release PGE 2 and PGD 2 in response to LPS stimulation ( Gebicke-Haerter et al. 1 JUMiner_v2.2 1 0 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 176468 15081582 235260 10676 6121 IRF6 LPS LPS 6 0.3 In cultures of neonatal rat microglia LPS induces equivalent levels of PGD 2 and TXA 2 over 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 176469 15081582 235260 16457 8891 PGD PGD PGD 11 0.0 cultures of neonatal rat microglia LPS induces equivalent levels of PGD 2 and TXA 2 over the initial 8 h 1 JUMiner_v2.2 1 0 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 176474 15081582 235266 10676 6121 IRF6 LPS LPS 5 0.3 In cultured rat brain microglia LPS induces COX-2 expression that is prevented in the presence of 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 176477 15081582 235267 10676 6121 IRF6 LPS LPS-stimulated 5 0.3 Thus NF-_amp_#x3ba B is involved in LPS-stimulated microglial COX-2 expression ( Bauer et al. 1997 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 176483 15081582 235276 1647 1044 BGN PGI PGI 16 0.0 by thromboxane A 2 (TXA TXA 2 but inhibited by PGI 2 ( Wu and Thiagarajan 1996 1 JUMiner_v2.2 1 0 0 2 1044 TotalCon:2<>1044|BGN|633|Complete__4458|GPI|2821|Complete__<>AvaiableGeneRif=2<>BEST:1044|BGN|0.00055137110031907<>ScoreDetail__1044|BGN|0.00055137110031907__4458|GPI|0.000443515174554901__ 0 0 0 0 0 176484 15081582 235278 16457 8891 PGD PGD PGD 0 0.0 PGD 2 produces sleep but wakefulness is promoted by PGE 2 1 JUMiner_v2.2 1 0 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 176487 15081582 235280 16457 8891 PGD PGD PGD 14 0.0 COX-2 increases again but this time with increased levels of PGD 2 and PGJ 2 and decreased inflammation 1 JUMiner_v2.2 1 0 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 176490 15081582 235288 16440 8884 PGA PGA PGA 2 0.6 For example PGA 1 that is derived from PGE 2 blunts NMDA receptor 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 176491 15081582 235288 7708 3811 FOXG1 QIN Qin 32 0.0 heat shock proteins and inhibition of NF-_amp_#x3ba B activity ( Qin et al. 2001 2 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 176495 15081582 235291 1647 1044 BGN PGI PGI 2 0.0 Analogs of PGI 2 also are neuroprotective ( Watanabe et al. 1999 1 JUMiner_v2.2 1 0 0 2 1044 TotalCon:2<>1044|BGN|633|Complete__4458|GPI|2821|Complete__<>AvaiableGeneRif=2<>BEST:1044|BGN|0.00055137110031907<>ScoreDetail__1044|BGN|0.00055137110031907__4458|GPI|0.000443515174554901__ 0 0 0 0 0 176496 15081582 235294 20996 11179 SOD1 ALS ALS 9 1.4 In both in vitro and in vivo models of ALS strong evidence is obtained for prostaglandins mediating apoptosis 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176503 15081582 235303 16457 8891 PGD PGD PGD 15 0.0 PGJ 2 a natural peroxisome proliferator-activated receptor-gamma ligand formed from PGD 2 induces apoptosis in both human astrocytes ( Chattopadhyay et 1 JUMiner_v2.2 1 0 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 176504 15081582 235304 16457 8891 PGD PGD PGD 2 0.0 Exposure to PGD 2 synthase induces apoptosis in PC12 neuronal cells via caspase-3 1 JUMiner_v2.2 1 0 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 176505 15081582 235305 16457 8891 PGD PGD PGD 16 0.0 with anti-PGD 2 synthase antibody or selenium that both inhibit PGD 2 synthase activity 1 JUMiner_v2.2 1 0 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 176506 15081582 235307 16459 8893 PGF PGF PGF 9 0.3 In addition PGE 1 PGE 2 and PGF 2 all inhibit PGD 2 synthase-induced apoptosis while PGH 2 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 176507 15081582 235307 16457 8891 PGD PGD PGD 13 0.0 addition PGE 1 PGE 2 and PGF 2 all inhibit PGD 2 synthase-induced apoptosis while PGH 2 has no effect ( 1 JUMiner_v2.2 1 0 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 176509 15081582 235316 16459 8893 PGF PGF PGF 4 0.3 Both PGE 2 and PGF 2 at micromolar concentrations prevent NMDA-induced death in cultured cortical 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 176511 15081582 235318 16459 8893 PGF PGF PGF 19 0.3 PGE 2 abrogates APHS neuroprotection but coapplication of APHS with PGF 2 maintains the APHS neuroprotective effect ( Carlson 2003 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 176516 15081582 235324 16440 8884 PGA PGA PGA 1 0.6 Prostaglandins PGA 1 PGA 2 and PGJ 2 all can suppress NF-_amp_#x3ba 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 176517 15081582 235324 16440 8884 PGA PGA PGA 4 0.6 Prostaglandins PGA 1 PGA 2 and PGJ 2 all can suppress NF-_amp_#x3ba B activation 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 176524 15081582 235337 20996 11179 SOD1 ALS ALS 0 1.4 ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176525 15081582 235338 20996 11179 SOD1 ALS ALS 0 1.4 ALS is the most common motor neuron disease in adults 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176526 15081582 235344 20996 11179 SOD1 ALS ALS 5 1.4 The pathogenic mechanisms underlying idiopathic ALS remain unknown 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176527 15081582 235345 20996 11179 SOD1 ALS ALS 1 1.4 Although ALS is described as a motor neuron disease it is likely 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176528 15081582 235347 20996 11179 SOD1 ALS ALS 10 1.4 The familial disorder is clinically and pathologically indistinguishable from sporadic ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176533 15081582 235351 20996 11179 SOD1 ALS ALS 9 1.4 However SOD1 mutations account for only 20% of familial ALS ( Feldman 1999 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176535 15081582 235352 20996 11179 SOD1 ALS ALS 10 1.4 Because mutant SOD1 explains only a very small subset of ALS pathology it is very likely that ALS is a disorder 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176536 15081582 235352 20996 11179 SOD1 ALS ALS 17 1.4 small subset of ALS pathology it is very likely that ALS is a disorder with heterogeneous causes 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176537 15081582 235354 20996 11179 SOD1 ALS ALS 9 1.4 Common theories to explain the pathogenic mechanism of idiopathic ALS include (1) 1 excitotoxic damage secondary to excessive glutamate (2) 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176538 15081582 235356 20996 11179 SOD1 ALS ALS 7 1.4 Although the root cause or causes of ALS remain unclear there is new interest in the role of 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176539 15081582 235357 20996 11179 SOD1 ALS ALS 0 1.4 ALS spinal cord tissue is characterized by neuroinflammatory changes consistent with 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176540 15081582 235359 20996 11179 SOD1 ALS ALS 18 1.4 major relevance to developing new clinical therapies for treatment of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176542 15081582 235360 20996 11179 SOD1 ALS ALS 3 1.4 COX prostaglandins and ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176544 15081582 235361 20996 11179 SOD1 ALS ALS 9 1.4 COX-2 activity appears to play an important role in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176546 15081582 235362 20996 11179 SOD1 ALS ALS 9 1.4 In many different models COX-2 upregulation occurs concurrently with ALS disease events 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176548 15081582 235363 20996 11179 SOD1 ALS ALS 18 1.4 of sevenfold in postmortem spinal cords of patients with sporadic ALS ( Almer et al. 2001 and Yasojima et al. 2001 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176556 15081582 235366 20996 11179 SOD1 ALS ALS 14 1.4 glutamate-induced motor neuron loss this prominent prostaglandin is implicated in ALS pathogenesis 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176560 15081582 235369 20996 11179 SOD1 ALS ALS 16 1.4 protects motor neurons in an organotypic cell culture model of ALS ( Drachman and Rothstein 2000 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176569 15081582 235375 20996 11179 SOD1 ALS ALS 17 1.4 inhibitor also prolongs survival in the mSOD1 mouse model of ALS ( Drachman et al. 2002 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176575 15081582 235380 18723 10261 ROS1 ROS ROS 3 0.0 Reactive oxygen species (ROS) ROS that are produced downstream of exposure to NMDA can cause 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 176577 15081582 235381 18723 10261 ROS1 ROS ROS 2 0.0 Yet NMDA-induced ROS are produced from multiple sources and it is not known 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 176578 15081582 235381 18723 10261 ROS1 ROS ROS 17 0.0 sources and it is not known whether the amount of ROS produced by the COX enzyme is sufficient to cause neuronal 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 176581 15081582 235384 20996 11179 SOD1 ALS ALS 20 1.4 production plays a significant role in neurodegenerative disorders such as ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176582 15081582 235385 20996 11179 SOD1 ALS ALS 1 1.4 In ALS however the link between the pathology of the disease and 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176584 15081582 235387 20996 11179 SOD1 ALS ALS 7 1.4 Although treatment of neurodegenerative diseases such as ALS with COX-2 inhibitors is likely to produce some symptomatic benefit 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 176592 15081582 235396 20996 11179 SOD1 ALS ALS 22 1.4 also stop the progressive loss of motor neurons in the ALS patient 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000767671373411518<>ScoreDetail__5468|IGFALS|0.00028997100289971__11179|SOD1|0.000767671373411518__ 0 0 0 0 0 169750 15210305 227134 20996 11179 SOD1 ALS ALS 6 4.1 Research efforts in amyotrophic lateral sclerosis (ALS) ALS have not yet provided a comprehensive explanation of the disease 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169751 15210305 227136 20996 11179 SOD1 ALS ALS 14 4.1 significantly improved our understanding of the molecular changes occurring in ALS although its limitations in the detection of low-abundance transcripts in 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169752 15210305 227137 20996 11179 SOD1 ALS ALS 16 4.1 on an expression study in post-mortem spinal cord from sporadic ALS individuals will be discussed in light of recently published data 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169753 15210305 227139 20996 11179 SOD1 ALS ALS 8 4.1 Through the analysis of the information arising from ALS post-mortem and animal model tissues studies we have identified a 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169754 15210305 227141 20996 11179 SOD1 ALS ALS 4 4.1 Introduction molecular studies on ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169755 15210305 227142 20996 11179 SOD1 ALS ALS 19 4.1 shed light on the pathogenesis of amyotrophic lateral sclerosis (ALS) ALS which include the significant findings that have arisen in the 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169756 15210305 227143 20996 11179 SOD1 ALS ALS 0 4.1 ALS can be inherited as an autosomal dominant trait in a 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169757 15210305 227144 20996 11179 SOD1 ALS ALS 1 4.1 Familial ALS (FALS) FALS is a heterogeneous entity 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169758 15210305 227146 20996 11179 SOD1 ALS ALS 2 4.1 The first ALS locus (ALS1) ALS1 to be identified on chromosome 21 contains 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169761 15210305 227147 20996 11179 SOD1 ALS ALS 15 4.1 been identified for the classical form of adult-onset autosomal dominant ALS but two new loci have been reported the first of 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169763 15210305 227150 20996 11179 SOD1 ALS ALS 28 4.1 been found in a juvenile onset rare recessive form of ALS characterized by a predominant spastic paraparesis 33 and 112 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169765 15210305 227152 20996 11179 SOD1 ALS ALS 15 4.1 gene (VEGF) VEGF as a risk/causitive risk causitive factor in ALS has been recently evaluated through extensive genotyping in patients and 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169766 15210305 227152 20996 11179 SOD1 ALS ALS 37 4.1 populations and using expression analysis in an animal model of ALS and post-mortem tissue from affected individuals 31 50 and 74 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169769 15210305 227154 20996 11179 SOD1 ALS ALS 10 4.1 VEGF coding region analysis has failed to identify mutations in ALS patients but further genotyping of Swedish Belgian and English patients 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169771 15210305 227154 20996 11179 SOD1 ALS ALS 41 4.1 which is associated with a 1.8 times greater risk of ALS and with lowered circulating VEGF levels in vivo 31 and 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169773 15210305 227155 20996 11179 SOD1 ALS ALS 13 4.1 have emerged from the analysis of potential risk factors in ALS such as the neurofilament heavy subunit 25 the apolipoprotein E 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169774 15210305 227155 20478 11117 SMN1 SMN SMN 35 0.6 apolipoprotein E allele 4 71 the gene-survival motor neuron (SMN) SMN and neuronal apoptosis inhibitory protein (NAIP) NAIP 79 1 JUMiner_v2.2 1 2 UserEdit 0 2 6510 TotalCon:3<>6510|STMN1|3925|Complete__11117|SMN1|6606|Complete__11164|SNRPN|6638|Complete__<>AvaiableGeneRif=3<>BEST:6510|STMN1|0.00124258466838137<>ScoreDetail__11117|SMN1|0.000835550050902403__11164|SNRPN|0.000636246962125556__6510|STMN1|0.00124258466838137__ 1 1 0 0 0 169780 15210305 227158 20996 11179 SOD1 ALS ALS 17 4.1 by the disease has represented an alternative research strategy in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169781 15210305 227159 20996 11179 SOD1 ALS ALS 26 4.1 proteins and enzyme activity in spinal cord and cortex from ALS individuals 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169782 15210305 227163 20996 11179 SOD1 ALS ALS 18 4.1 the main findings obtained through traditional gene expression studies in ALS affected tissues and describe the results of large-scale gene expression 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169783 15210305 227163 20996 11179 SOD1 ALS ALS 42 4.1 spinal cord from individuals affected by the sporadic form of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169784 15210305 227166 20996 11179 SOD1 ALS ALS 12 4.1 is to extrapolate significant information about molecular pathways involved in ALS pathogenesis and their importance in different phases of disease progression 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169785 15210305 227182 19327 30369 SAGE1 SAGE SAGE 12 1.0 hybridization (SH) SH and serial analysis of gene expression (SAGE) SAGE allow the comparison of a large number of mRNAs at 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 169786 15210305 227192 19327 30369 SAGE1 SAGE SAGE 17 1.0 rat hippocampus comparing the results to baseline data obtained from SAGE expression analysis on the same tissue estimates that Affymetrix arrays 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 169787 15210305 227198 20233 10986 SLC25A16 GDA GDA 9 0.6 A traditional membrane-based array technology the Gene Discovery Array (GDA) GDA filter is the array format utilized in a study of 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>4212|GDA|9615|Complete__10986|SLC25A16|8034|No_GeneRif__<>AvaiableGeneRif=1<> 1 1 0 0 0 169788 15210305 227198 20996 11179 SOD1 ALS ALS 23 4.1 array format utilized in a study of gene expression in ALS spinal cord study discussed in this paper 60 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169789 15210305 227200 20233 10986 SLC25A16 GDA GDA 1 0.6 The GDA filter is a low-cost alternative to the recently developed microarrays 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>4212|GDA|9615|Complete__10986|SLC25A16|8034|No_GeneRif__<>AvaiableGeneRif=1<> 1 1 0 0 0 169790 15210305 227202 20996 11179 SOD1 ALS ALS 25 4.1 expression studies undertaken in spinal cord tissue from individuals with ALS compared to normal controls 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169791 15210305 227204 20996 11179 SOD1 ALS ALS 3 4.1 Transcriptional analysis in ALS spinal cord single mRNA studies and gene array screening 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169792 15210305 227205 20996 11179 SOD1 ALS ALS 4 4.1 Gene expression studies in ALS have targeted tissues known to be functionally involved and those 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169793 15210305 227206 20996 11179 SOD1 ALS ALS 1 4.1 Both ALS post-mortem tissue and tissues taken from animal models (G93 G93 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169795 15210305 227206 20996 11179 SOD1 ALS ALS 15 4.1 taken from animal models (G93 G93 SOD1 transgenic mouse of ALS have been investigated 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169796 15210305 227209 20996 11179 SOD1 ALS ALS 18 4.1 under five main headings which cover pathogenic mechanisms implicated in ALS pathogenesis 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169797 15210305 227212 20996 11179 SOD1 ALS ALS 39 4.1 analysis of spinal cord tissues from both sporadic and familial ALS individuals and from healthy controls 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169799 15210305 227215 20996 11179 SOD1 ALS ALS 17 4.1 oxidative stress has gained momentum as a major factor in ALS pathogenesis 90 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169803 15210305 227222 20996 11179 SOD1 ALS ALS 1 4.1 In ALS prolonged synaptic activation by glutamate could trigger neuronal cell damage 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169805 15210305 227224 20996 11179 SOD1 ALS ALS 4 4.1 The array-based analysis of ALS spinal cord using a GDA filter format has also confirmed 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169806 15210305 227224 20233 10986 SLC25A16 GDA GDA 9 0.6 The array-based analysis of ALS spinal cord using a GDA filter format has also confirmed a pattern of marked differential 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>4212|GDA|9615|Complete__10986|SLC25A16|8034|No_GeneRif__<>AvaiableGeneRif=1<> 1 1 0 0 0 169809 15210305 227226 20996 11179 SOD1 ALS ALS 16 4.1 powerful antioxidant function counteracting the copper-catalysed oxidation of proteins in ALS tissue 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169811 15210305 227230 20996 11179 SOD1 ALS ALS 9 4.1 Flavin-containing monooxygenase (FMO) FMO found to be significantly down-regulated in ALS spinal cord exerts a powerful intrinsic protective action against oxidative 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169812 15210305 227231 20996 11179 SOD1 ALS ALS 23 4.1 to be markedly up-regulated in spinal cord from individuals with ALS 59 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169813 15210305 227234 22710 12017 TPR TPR TPR 8 0.6 A transcript identical to the ubiquitous tetratricopeptide repeat (TPR) TPR motif (Y Y isoform showed the highest level of differential 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 169814 15210305 227234 20233 10986 SLC25A16 GDA GDA 22 0.6 showed the highest level of differential gene expression in the GDA array study 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>4212|GDA|9615|Complete__10986|SLC25A16|8034|No_GeneRif__<>AvaiableGeneRif=1<> 1 1 0 0 0 169815 15210305 227235 22710 12017 TPR TPR TPR 1 0.6 The TPR motif facilitates protein_amp_#x2013 protein interaction and the assembly of multiprotein 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 169816 15210305 227236 22710 12017 TPR TPR TPR-containing 0 1.1 TPR-containing mRNAs share common structural and functional properties with 14-3-3 proteins 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 169817 15210305 227237 22710 12017 TPR TPR TPR 0 0.6 TPR motifs are also involved in processes such as transcription control 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 169818 15210305 227239 20996 11179 SOD1 ALS ALS 10 4.1 Altered patterns of NF phosphorylation have also been documented in ALS 47 and 104 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169820 15210305 227241 20996 11179 SOD1 ALS ALS 7 4.1 Indirect evidence of nitration of neurofilaments in ALS spinal cord is indicated by elevated levels of 3-nitrotyrosine and 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169822 15210305 227243 20996 11179 SOD1 ALS ALS 23 4.1 the degeneration of the motor neurones in spinal cord from ALS individuals 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169823 15210305 227245 20996 11179 SOD1 ALS ALS-related 0 2.9 ALS-related differential expression has been identified in tissues other than those 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169824 15210305 227247 20996 11179 SOD1 ALS ALS 31 4.1 procollagen (PIIIP) PIIIP in serum and skin of patients with ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169825 15210305 227248 20996 11179 SOD1 ALS ALS 7 4.1 The PIIIP immunoreactivity in these tissues from ALS individuals was significantly higher than in controls and was markedly 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169827 15210305 227249 20996 11179 SOD1 ALS ALS 16 4.1 of collagen taking place in the skin and serum of ALS patients and the neurodegenerative changes targeting the motor neurones population 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169829 15210305 227250 20996 11179 SOD1 ALS ALS 16 4.1 serum but not in homogenates of spinal cord from sporadic ALS patients indicates that hypoxia may play a part during the 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169831 15210305 227256 20996 11179 SOD1 ALS ALS 14 4.1 in human neuroblastoma cell lines by anti-Fas antibody-containing sera from ALS patients whereas this was less convincingly obtained using sera from 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169832 15210305 227257 20996 11179 SOD1 ALS ALS 10 4.1 Other authors have failed to demonstrate evidence of apoptosis in ALS 36 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169833 15210305 227258 20996 11179 SOD1 ALS ALS 38 4.1 in dorsal and ventral horns of autopsied spinal cord from ALS cases 108 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169839 15210305 227260 20996 11179 SOD1 ALS ALS 13 4.1 SAPK-c-Jun pathway was found to be markedly up-regulated 67 in ALS spinal cord astrocytes together with NF-kappa B whereas motor neurones 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169840 15210305 227261 20996 11179 SOD1 ALS ALS 14 4.1 idea that astrocytes are key players in the pathogenesis of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169841 15210305 227262 20996 11179 SOD1 ALS ALS 22 4.1 to be differentially regulated using large-scale gene expression studies in ALS spinal cord 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169842 15210305 227265 20996 11179 SOD1 ALS ALS 12 4.1 selective pro-apoptotic activity targeting the glial and neuronal cells in ALS spinal cord may be suggested in light of these expression 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169848 15210305 227271 20996 11179 SOD1 ALS ALS 8 4.1 The importance of this anti-apoptotic agent over-expressed in ALS spinal cord and down-regulated in a hereditary form of epilepsy 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169850 15210305 227272 20996 11179 SOD1 ALS ALS 35 4.1 segmental myoclonus in EPM1 and paralysis with muscle wasting in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169851 15210305 227276 20996 11179 SOD1 ALS ALS 4 4.1 Gene expression analysis in ALS spinal cord has revealed the differential regulation of transcripts contributing 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169852 15210305 227276 20996 11179 SOD1 ALS ALS 40 4.1 silenced_amp_#x201d in spinal cord from post-mortem and animal model of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169855 15210305 227278 20996 11179 SOD1 ALS ALS 13 4.1 down-regulated in the lateral corticospinal tracts of spinal cord from ALS patients compared to control particularly in those patients exhibiting a 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169858 15210305 227279 20996 11179 SOD1 ALS ALS 23 4.1 significant association between allelic variants of this gene and familial ALS (FALS) FALS 44 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169859 15210305 227280 20996 11179 SOD1 ALS ALS 10 4.1 A marked increase in CNTFR-alpha mRNA expression was found in ALS spinal cord whereas the same transcript showed little or no 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169860 15210305 227280 20996 11179 SOD1 ALS ALS 23 4.1 whereas the same transcript showed little or no expression in ALS motor cortex with no differences seen between ALS and control 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169861 15210305 227280 20996 11179 SOD1 ALS ALS 31 4.1 expression in ALS motor cortex with no differences seen between ALS and control tissues 22 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169863 15210305 227281 20996 11179 SOD1 ALS ALS 16 4.1 been investigated in anterior horn cells of spinal cord from ALS patients using reverse transcription polymerase chain reaction (RT-PCR) RT-PCR and 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169865 15210305 227282 20996 11179 SOD1 ALS ALS 35 4.1 spinal cord but it became detectable in motor neurones of ALS patients with a further up-regulation during disease progression 70 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169866 15210305 227283 20996 11179 SOD1 ALS ALS 9 4.1 The same pattern of up-regulation in motor neurones from ALS spinal cord applies to growth-associated protein 43 (GAP43), GAP43 a 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169868 15210305 227284 20996 11179 SOD1 ALS ALS 39 4.1 androgens and steroids were seen in post-mortem spinal cord from ALS individuals and from animal models of the disease 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169870 15210305 227285 20996 11179 SOD1 ALS ALS 32 4.1 in which a clinical picture of motor neurone degeneration resembling ALS and clinical signs of androgen partial insensitivity (gynecomastia) gynecomastia coexist 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169871 15210305 227287 20996 11179 SOD1 ALS ALS 11 4.1 was found to be over-expressed in spinal cord tissues from ALS individuals 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169873 15210305 227290 20996 11179 SOD1 ALS ALS 18 4.1 rat H-REV107-like protein was found to be significantly up-regulated in ALS spinal cord 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169876 15210305 227292 20996 11179 SOD1 ALS ALS 9 4.1 Cellular retinol-binding protein1 (CRBP1) CRBP1 showed a marked up-regulation in ALS spinal cord 60 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169878 15210305 227297 18723 10261 ROS1 ROS ROS 8 0.3 Retinoid acid (RA) RA reduces neuronal reactive oxygen species (ROS) ROS content and enhances SOD1 protein levels during staurosporine-induced apoptosis in 1 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 169882 15210305 227300 20996 11179 SOD1 ALS ALS 7 4.1 The marked up-regulation of the CRBP1 in ALS spinal cord and of the retinoid receptor subunit in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169883 15210305 227300 20996 11179 SOD1 ALS ALS 17 4.1 ALS spinal cord and of the retinoid receptor subunit in ALS transgenic mice may be a response to a _amp_#x201c loss 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169884 15210305 227302 20996 11179 SOD1 ALS ALS 13 4.1 an involvement of these molecular pathways in the pathogenesis of ALS may find some support in the study by Yoshihara et 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169886 15210305 227304 20996 11179 SOD1 ALS ALS 8 4.1 In addition the over-expression of hormone-sensitive transcripts in ALS spinal cord such as granulin may be related to the 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169887 15210305 227306 20996 11179 SOD1 ALS ALS 34 4.1 us to reveal further important clues in the pathogenesis of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169888 15210305 227309 20996 11179 SOD1 ALS ALS 9 4.1 The role of tissue inflammation in the development of ALS pathology has been widely debated 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169889 15210305 227310 20996 11179 SOD1 ALS ALS 12 4.1 of any consistent response to immunosuppressive and immuno-modulatory treatments in ALS is not consistent with autoimmunity playing a major role in 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169890 15210305 227311 20996 11179 SOD1 ALS ALS 21 4.1 of glutamate-mediated excitotoxicity may trigger a tissue inflammatory response in ALS 12 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169893 15210305 227315 18723 10261 ROS1 ROS ROS 11 0.3 stimulates microglia to secrete cytokines and reactive oxygen species (ROS), ROS which can induce neuronal damage 1 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 169894 15210305 227316 20996 11179 SOD1 ALS ALS 13 4.1 T cells adhering to postcapillary venules are frequently observed in ALS and in mouse models of the disease 63 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169895 15210305 227317 20996 11179 SOD1 ALS ALS 18 4.1 over-expression of transcripts associated with immune and inflammatory response within ALS spinal cord and in the activation of the complement system 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169898 15210305 227318 20996 11179 SOD1 ALS ALS 19 4.1 have been found to be markedly up-regulated in areas of ALS spinal cord undergoing degeneration 30 and 80 whereas a study 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169899 15210305 227318 20996 11179 SOD1 ALS ALS 43 4.1 kinase-5 (cdk-5) cdk-5 regional expression identified a significant up-regulation in ALS affected motor neurones 6 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169902 15210305 227319 20996 11179 SOD1 ALS ALS 16 4.1 of microglia activation have been reported to be up-regulated in ALS spinal cord tissue 113 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169904 15210305 227320 20996 11179 SOD1 ALS ALS 6 4.1 The significant up-regulation of COX-2 in ALS spinal cord compared to control tissues including patients affected by 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169905 15210305 227320 20996 11179 SOD1 ALS ALS 42 4.1 observation of a central role of an inflammatory response in ALS pathogenesis 113 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169908 15210305 227322 20233 10986 SLC25A16 GDA GDA 1 0.6 The GDA array study has further contributed to the identification of differentially 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>4212|GDA|9615|Complete__10986|SLC25A16|8034|No_GeneRif__<>AvaiableGeneRif=1<> 1 1 0 0 0 169910 15210305 227323 20996 11179 SOD1 ALS ALS 10 4.1 I receptor accessory protein (IL-1RAcP) IL-1RAcP mRNA markedly over-expressed in ALS spinal cord is a trans-membrane protein belonging to a receptor 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169914 15210305 227326 20996 11179 SOD1 ALS ALS 30 4.1 reaction causing dendritic/axonal dendritic axonal and somatic degeneration closely resembling ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169916 15210305 227327 20233 10986 SLC25A16 GDA GDA 11 0.6 inducible cytokine (RANTES) RANTES mRNA was also found in the GDA study to be up-regulated in ALS spinal cord 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>4212|GDA|9615|Complete__10986|SLC25A16|8034|No_GeneRif__<>AvaiableGeneRif=1<> 1 1 0 0 0 169917 15210305 227327 20996 11179 SOD1 ALS ALS 17 4.1 also found in the GDA study to be up-regulated in ALS spinal cord 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169920 15210305 227332 20996 11179 SOD1 ALS ALS 3 4.1 Studies on post-mortem ALS spinal cord have hinted at a potential role for lipid 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169921 15210305 227332 20996 11179 SOD1 ALS ALS 21 4.1 role for lipid and oxysterols metabolism in the pathogenesis of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169922 15210305 227333 20996 11179 SOD1 ALS ALS 12 4.1 up-regulation of cholesterol 25 hydroxylase has been identified in post-mortem ALS spinal cord 60 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169923 15210305 227336 20996 11179 SOD1 ALS ALS 13 4.1 an abnormal metabolism of cholesterol as a disease-causing factor in ALS has been strengthened further by the report of abnormalities in 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169924 15210305 227336 20996 11179 SOD1 ALS ALS 33 4.1 in sphingolipid and cholesterol metabolism in the spinal cords of ALS patients and animal models of the disease based on the 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169930 15210305 227344 78 61 ABCD1 adrenoleukodystrophy adrenoleukodystrophy 4 1.0 A form of X-linked adrenoleukodystrophy (X-ALD) X-ALD which involves the spinal cord adrenomyeloneuropathy (AMN), AMN 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 169931 15210305 227344 78 61 ABCD1 AMN AMN 12 1.0 adrenoleukodystrophy (X-ALD) X-ALD which involves the spinal cord adrenomyeloneuropathy (AMN), AMN is another neurodegenerative disease characterized by elevated levels of saturated 1 JUMiner_v2.2 1 2 UserEdit 0 2 61 TotalCon:2<>14604|AMN|81693|Complete__61|ABCD1|215|Complete__<>AvaiableGeneRif=2<>BEST:61|ABCD1|0.000689058035943246<>ScoreDetail__14604|AMN|0.000485149686427642__61|ABCD1|0.000689058035943246__ 1 1 0 0 0 169932 15210305 227346 20996 11179 SOD1 ALS ALS 9 4.1 Spinal cord expression profiles in an animal model of ALS compared to post-mortem findings what can we learn 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169933 15210305 227349 20996 11179 SOD1 ALS ALS 1 4.1 In ALS the interpretation of the gene expression profile in post-mortem tissue 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169936 15210305 227353 20996 11179 SOD1 ALS ALS 13 4.1 spinal cord from this transgenic construct is in line with ALS studies yielding a pattern of differential regulation of gene candidates 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169937 15210305 227360 18741 10289 RPA1 RPA RPAs 38 0.0 apoptosis-related genes were investigated using multiprobe ribonuclease protection assays (RPAs) RPAs in the study by Hensley et al 37 whereas the 13 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 169938 15210305 227367 20996 11179 SOD1 ALS ALS 24 4.1 life in spinal cord from the G93A animal model of ALS which undergoes a slight decline towards the 120th day ( 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169949 15210305 227373 20996 11179 SOD1 ALS ALS 37 4.1 be up-regulated in spinal cord of the animal model of ALS 109 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169950 15210305 227375 20996 11179 SOD1 ALS ALS 5 4.1 In the animal model of ALS LO shows a steady increase at 3 and 4.5 months 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169952 15210305 227376 20996 11179 SOD1 ALS ALS 8 4.1 The expression data from the animal model of ALS indicates that an inflammatory reaction persists throughout the disease enhanced 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169953 15210305 227379 20996 11179 SOD1 ALS ALS 25 4.1 regulated in a post-mortem expression study of spinal cord from ALS cases in adult rat motor neurones following hypoglossal nerve injury 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169955 15210305 227380 20996 11179 SOD1 ALS ALS 11 4.1 the other hand RNAse-I which is also significantly up-regulated in ALS is known to have an anti-proliferative effect and it may 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169958 15210305 227382 20996 11179 SOD1 ALS ALS 8 4.1 Up-regulation of cystatin B and 14-3-3 proteins in ALS spinal cord may also be seen as an anti-apoptotic mechanism 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169959 15210305 227383 20996 11179 SOD1 ALS ALS 19 4.1 protective function has been found to be markedly down-regulated in ALS spinal cord 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169963 15210305 227391 20996 11179 SOD1 ALS ALS 18 4.1 studies gene expression analysis in human post-mortem spinal cord from ALS individuals shows that the majority of differentially regulated transcripts serve 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169965 15210305 227395 20996 11179 SOD1 ALS ALS 19 4.1 differentially expressed in the expression studies in human tissue from ALS individuals 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169966 15210305 227397 20996 11179 SOD1 ALS ALS 12 4.1 a recent molecular indexing and cDNA microarray analysis study on ALS spinal cord have also been included which account for a 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169967 15210305 227404 20996 11179 SOD1 ALS ALS 6 4.1 In the G93A animal models of ALS clinical manifestations appear as early as 60_amp_#x2013 90 days of 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169969 15210305 227408 20996 11179 SOD1 ALS ALS 24 4.1 analysis in the spinal cord of the animal model of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169970 15210305 227414 1372 870 ATP7B ATP7B ATP7B 0 0.0 ATP7B regulates copper uptake in the trans-Golgi network which is channeled 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 169973 15210305 227417 20996 11179 SOD1 ALS ALS 36 4.1 early involvement of impaired axonal transport in the development of ALS 111 and LDL-r which is involved in lipid metabolism 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169976 15210305 227421 20996 11179 SOD1 ALS ALS 6 4.1 The quest for pathogenic clues in ALS makes it a priority to understand these events in the 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169977 15210305 227424 20996 11179 SOD1 ALS ALS 13 4.1 be also identified in more accessible tissue of the living ALS patients such as blood or skin providing a way of 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169978 15210305 227429 20996 11179 SOD1 ALS ALS 21 4.1 candidates functionally related to the gene families highlighted in the ALS expression studies reported above 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169979 15210305 227435 20996 11179 SOD1 ALS ALS 9 4.1 This molecular picture clearly differs from the findings in ALS spinal cord where remarkable up-regulation of stress-related and cytoskeletal transcripts 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169987 15210305 227442 2163 1325 C4BPA PrP PrP 37 1.3 as lipopolysaccharide and IFN-gamma as well as prion protein (PrP) PrP amyloid 5 1 JUMiner_v2.2 1 2 UserEdit 0 2 9353 TotalCon:4<>9353|PRDX2|7001|Complete__9449|PRNP|5621|Complete__47|ABCB6|10058|Complete__1325|C4BPA|722|Complete__<>AvaiableGeneRif=4<>BEST:9353|PRDX2|0.000802889290179192<>ScoreDetail__1325|C4BPA|0.000456412596987677__47|ABCB6|0.000359424920127796__9353|PRDX2|0.000802889290179192__9449|PRNP|0.000643033151108111__ 1 1 0 0 0 169989 15210305 227443 2163 1325 C4BPA PrP PrP 7 1.3 A microglia-activated phenotype is detectable even before PrP pathology is detectable in brain 1 JUMiner_v2.2 1 2 UserEdit 0 2 9353 TotalCon:4<>9353|PRDX2|7001|Complete__9449|PRNP|5621|Complete__47|ABCB6|10058|Complete__1325|C4BPA|722|Complete__<>AvaiableGeneRif=4<>BEST:9353|PRDX2|0.000802889290179192<>ScoreDetail__1325|C4BPA|0.000456412596987677__47|ABCB6|0.000359424920127796__9353|PRDX2|0.000802889290179192__9449|PRNP|0.000643033151108111__ 1 1 0 0 0 169990 15210305 227450 20996 11179 SOD1 ALS ALS 4 4.1 In contrast in the ALS studies various members of the retinoid pathways seem to be 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169992 15210305 227462 20996 11179 SOD1 ALS ALS 15 4.1 studies in tissues undergoing degeneration in neurological conditions such as ALS is becoming increasingly evident with the development of molecular studies 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169993 15210305 227463 19327 30369 SAGE1 SAGE SAGE 14 1.0 applied in a search for new PD molecular abnormalities using SAGE to identify potential candidate genes in substantia nigra (SN) SN 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 169995 15210305 227465 20996 11179 SOD1 ALS ALS 43 4.1 and the ALS4 locus (9q34) 9q34 for early onset dominant ALS cases 10 in which RXR-alpha is located 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169997 15210305 227468 20996 11179 SOD1 ALS ALS 4 4.1 As reported above for ALS the two experimental approaches can yield a similar picture with 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169998 15210305 227472 20996 11179 SOD1 ALS ALS 3 4.1 A model of ALS pathogenesis from healthy motor neurones (MN) MN and glia through 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 169999 15210305 227472 20996 11179 SOD1 ALS ALS 37 4.1 genes that have been detected in spinal cord tissue from ALS cases 59 and 60 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 170001 15210305 227480 18741 10289 RPA1 RPA RPAs 38 0.0 apoptosis-related genes were investigated using multiprobe ribonuclease protection assays (RPAs) RPAs in the study by Hensley et al 39 whereas the 13 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 170002 15210305 227482 20996 11179 SOD1 ALS ALS 10 4.1 Summary of functional categories of genes that are affected in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 170003 15210305 227483 20996 11179 SOD1 ALS ALS 28 4.1 transcripts identified in the expression studies in spinal cord from ALS individuals 43 and 60 *This category includes genes involved in 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000753659189285332<>ScoreDetail__5468|IGFALS|0.000600572854106994__11179|SOD1|0.000753659189285332__ 0 0 0 0 0 164490 15453089 221281 20996 11179 SOD1 ALS ALS 25 3.4 such as multiple sclerosis (MS), MS amyotrophic lateral sclerosis (ALS), ALS Parkinson disease (PD), PD Creutzfeldt-Jakob disease (CJD), CJD and Alzheimer 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00131390228980071<>ScoreDetail__5468|IGFALS|0.000611670676507768__11179|SOD1|0.00131390228980071__ 0 0 0 0 0 164491 15453089 221281 17345 9449 PRNP CJD CJD 31 1.7 sclerosis (ALS), ALS Parkinson disease (PD), PD Creutzfeldt-Jakob disease (CJD), CJD and Alzheimer disease (AD) AD 1 JUMiner_v2.2 1 2 creutzfeldt 0 0 0 0 0 0 0 0 164521 15453089 221301 16457 8891 PGD PGD PGD 9 0.0 In agreement with this hypothesis PGE 2 but not PGD 2 reversed the suppression of LTP induced by COX-2-inhibitor in 1 JUMiner_v2.2 1 0 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 164552 15453089 221329 7438 3613 FCGR1A CD64 CD64-positive 3 1.0 However not all CD64-positive cells expressed COX-2 1 JUMiner_v2.2 1 2 32 0 2 3613 TotalCon:3<>3613|FCGR1A|2209|Complete__3614|FCGR1B|2210|Complete__3615|FCGR1C|2211|No_GeneRif__<>AvaiableGeneRif=2<>BEST:3613|FCGR1A|0.000638172481034299<>ScoreDetail__3614|FCGR1B|0.000511948995102179__3613|FCGR1A|0.000638172481034299__ 0 0 0 0 0 164560 15453089 221336 18723 10261 ROS1 ROS ROS 19 0.0 PGE 2 analog suggesting that distinct COX-derived products (i.e i.e ROS and PGs may have protective or detrimental effects in EAE 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 164561 15453089 221338 11629 6493 LAMC2 CSF CSF 3 0.3 Recently cerebrospinal fluid (CSF) CSF levels of PGE 2 and isoprostane 8-epi-PGF 2 a stable 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 164562 15453089 221341 11629 6493 LAMC2 CSF CSF 12 0.3 of PGE 2 and that of 8-epi-PGF 2 in the CSF of each single subject were not correlated suggesting that PG 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 164563 15453089 221343 20996 11179 SOD1 ALS ALS 3 3.4 Amyotrophic lateral sclerosis (ALS) ALS is a devastating neurodegenerative disease characterized by the progressive loss 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00131390228980071<>ScoreDetail__5468|IGFALS|0.000611670676507768__11179|SOD1|0.00131390228980071__ 0 0 0 0 0 164565 15453089 221345 20996 11179 SOD1 ALS ALS 18 3.4 superoxide dismutase (SOD1) SOD1 account for a familial form of ALS linked to chromosome 21q 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00131390228980071<>ScoreDetail__5468|IGFALS|0.000611670676507768__11179|SOD1|0.00131390228980071__ 0 0 0 0 0 164567 15453089 221347 20996 11179 SOD1 ALS ALS 8 3.4 Spinal cord tissue from patients who died of ALS shows several neuroinflammatory changes that are found in other neurodegenerative 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00131390228980071<>ScoreDetail__5468|IGFALS|0.000611670676507768__11179|SOD1|0.00131390228980071__ 0 0 0 0 0 164568 15453089 221349 11629 6493 LAMC2 CSF CSF 3 0.3 In addition high CSF levels of glutamate and excitotoxicity have been reported in ALS 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 164569 15453089 221349 20996 11179 SOD1 ALS ALS 13 3.4 CSF levels of glutamate and excitotoxicity have been reported in ALS ( 41 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00131390228980071<>ScoreDetail__5468|IGFALS|0.000611670676507768__11179|SOD1|0.00131390228980071__ 0 0 0 0 0 164572 15453089 221350 20996 11179 SOD1 ALS ALS 22 3.4 set the basis for the hypothesis of COX-2 involvement in ALS pathogenesis 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00131390228980071<>ScoreDetail__5468|IGFALS|0.000611670676507768__11179|SOD1|0.00131390228980071__ 0 0 0 0 0 164574 15453089 221351 20996 11179 SOD1 ALS ALS 11 3.4 mRNA and protein were increased in postmortem spinal cords of ALS patients ( 42 and transgenic mutated SOD1 mice ( 43 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00131390228980071<>ScoreDetail__5468|IGFALS|0.000611670676507768__11179|SOD1|0.00131390228980071__ 0 0 0 0 0 164577 15453089 221353 11629 6493 LAMC2 CSF CSF 12 0.3 independent studies reported increased levels of PGE 2 in the CSF of ALS patients ( 44 45 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 164578 15453089 221353 20996 11179 SOD1 ALS ALS 14 3.4 reported increased levels of PGE 2 in the CSF of ALS patients ( 44 45 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00131390228980071<>ScoreDetail__5468|IGFALS|0.000611670676507768__11179|SOD1|0.00131390228980071__ 0 0 0 0 0 164581 15453089 221356 20996 11179 SOD1 ALS ALS 5 3.4 In postmortem spinal cord of ALS patients COX-2 expression was markedly increased and localized to both 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00131390228980071<>ScoreDetail__5468|IGFALS|0.000611670676507768__11179|SOD1|0.00131390228980071__ 0 0 0 0 0 164586 15453089 221359 20996 11179 SOD1 ALS ALS 21 3.4 there was no significant difference was detected between control and ALS specimens ( 45 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00131390228980071<>ScoreDetail__5468|IGFALS|0.000611670676507768__11179|SOD1|0.00131390228980071__ 0 0 0 0 0 164590 15453089 221361 20996 11179 SOD1 ALS ALS 6 3.4 The role of COX-2 activity in ALS was examined by using selective COX-2 inhibitors 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00131390228980071<>ScoreDetail__5468|IGFALS|0.000611670676507768__11179|SOD1|0.00131390228980071__ 0 0 0 0 0 164597 15453089 221365 20996 11179 SOD1 ALS ALS 24 3.4 cascade of events leading to the progressive neuronal death in ALS patients 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00131390228980071<>ScoreDetail__5468|IGFALS|0.000611670676507768__11179|SOD1|0.00131390228980071__ 0 0 0 0 0 164606 15453089 221371 20996 11179 SOD1 ALS ALS 5 3.4 COX-2 could also contribute to ALS by promoting inflammatory processes 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00131390228980071<>ScoreDetail__5468|IGFALS|0.000611670676507768__11179|SOD1|0.00131390228980071__ 0 0 0 0 0 164607 15453089 221373 24402 12856 YY1 DELTA DELTA 17 1.3 can be generated and influence the course of disease 15-deoxy- DELTA 12-14 -PGJ 2 (15d-PGJ 15d-PGJ 2 immunoreactivity was found in 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>9543|PSMB6|5694|No_GeneRif__12856|YY1|7528|Complete__<>AvaiableGeneRif=1<> 1 1 0 0 0 164608 15453089 221373 20996 11179 SOD1 ALS ALS 32 3.4 15d-PGJ 2 immunoreactivity was found in spinal cords of sporadic ALS patients ( 48 15d-PGJ 2 derives from the non-enzymatic dehydration 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00131390228980071<>ScoreDetail__5468|IGFALS|0.000611670676507768__11179|SOD1|0.00131390228980071__ 0 0 0 0 0 164609 15453089 221373 16457 8891 PGD PGD PGD 45 0.0 ( 48 15d-PGJ 2 derives from the non-enzymatic dehydration of PGD 2 a major brain PG and activates the nuclear receptor 1 JUMiner_v2.2 1 0 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 164620 15453089 221394 17345 9449 PRNP CJD CJD 2 1.7 Creutzfeldt-Jakob disease (CJD) CJD is the best known human form of transmissible spongiform encephalopathies 1 JUMiner_v2.2 1 2 creutzfeldt 0 0 0 0 0 0 0 0 164624 15453089 221396 17345 9449 PRNP CJD CJD 11 1.7 further disease hallmark is the extensive microglial activation observed in CJD patients as well as in experimental prion diseases which supports 1 JUMiner_v2.2 1 2 creutzfeldt 0 0 0 0 0 0 0 0 164631 15453089 221401 17345 9449 PRNP CJD CJD 23 1.7 mice were infected with homogenates from 2 cases of genetic CJD and 3 cases of sporadic CJD ( 57 suggesting that 1 JUMiner_v2.2 1 2 creutzfeldt 0 0 0 0 0 0 0 0 164632 15453089 221401 17345 9449 PRNP CJD CJD 29 1.7 2 cases of genetic CJD and 3 cases of sporadic CJD ( 57 suggesting that the selective upregulation of COX-2 in 1 JUMiner_v2.2 1 2 creutzfeldt 0 0 0 0 0 0 0 0 164637 15453089 221402 17345 9449 PRNP CJD CJD 18 1.7 in which both COX-1 and COX-2 were increased in sporadic CJD cortex ( 58 1 JUMiner_v2.2 1 2 creutzfeldt 0 0 0 0 0 0 0 0 164640 15453089 221403 17345 9449 PRNP CJD CJD 28 1.7 isoforms were higher in tissue from temporal lobe of 1 CJD patient when compared to 1 neuropathologically unaltered control case 1 JUMiner_v2.2 1 2 creutzfeldt 0 0 0 0 0 0 0 0 164642 15453089 221404 11629 6493 LAMC2 CSF CSF 17 0.3 was confirmed by 2 studies ( 55 59 reporting elevated CSF PGE 2 levels in a group of 62 subjects affected 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 164643 15453089 221404 17345 9449 PRNP CJD CJD 32 1.7 a group of 62 subjects affected by sporadic and genetic CJD and in 18 cases of variant CJD the novel human 1 JUMiner_v2.2 1 2 creutzfeldt 0 0 0 0 0 0 0 0 164644 15453089 221404 17345 9449 PRNP CJD CJD 39 1.7 sporadic and genetic CJD and in 18 cases of variant CJD the novel human form associated with the consumption of contaminated 1 JUMiner_v2.2 1 2 creutzfeldt 0 0 0 0 0 0 0 0 164645 15453089 221405 17345 9449 PRNP CJD CJD 2 1.7 In sporadic CJD patients higher CSF levels of PGE 2 were associated with 1 JUMiner_v2.2 1 2 creutzfeldt 0 0 0 0 0 0 0 0 164646 15453089 221405 11629 6493 LAMC2 CSF CSF 5 0.3 In sporadic CJD patients higher CSF levels of PGE 2 were associated with shorter survival 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 164647 15453089 221406 11629 6493 LAMC2 CSF CSF 10 0.3 PGE 2 levels were not dependent on the time of CSF sampling during the course of the disease suggesting that PGE 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 164648 15453089 221407 11629 6493 LAMC2 CSF CSF 8 0.3 The increased levels of PGE 2 in the CSF of CJD patients and the high expression of COX-2 in 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 164649 15453089 221407 17345 9449 PRNP CJD CJD 10 1.7 The increased levels of PGE 2 in the CSF of CJD patients and the high expression of COX-2 in microglial cells 1 JUMiner_v2.2 1 2 creutzfeldt 0 0 0 0 0 0 0 0 164651 15453089 221408 17345 9449 PRNP CJD CJD 1 1.7 In CJD abundance of apoptotic neurons correlated well with microglial activation ( 1 JUMiner_v2.2 1 2 creutzfeldt 0 0 0 0 0 0 0 0 164657 15453089 221411 17345 9449 PRNP CJD CJD 10 1.7 At present whether PGE 2 contributes to neuronal death in CJD is a consequence of neuronal apoptosis or is just an 1 JUMiner_v2.2 1 2 creutzfeldt 0 0 0 0 0 0 0 0 164683 15453089 221431 11629 6493 LAMC2 CSF CSF 0 0.3 CSF levels of PGE 2 were increased in probable AD patients 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 164684 15453089 221432 11629 6493 LAMC2 CSF CSF 17 0.3 a longitudinal study in which PGE 2 was measured in CSF samples obtained on at least 3 annual visits in 35 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 164685 15453089 221433 11629 6493 LAMC2 CSF CSF 4 0.3 The study showed that CSF PGE 2 declines with the increasing dementia severity 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 164686 15453089 221434 11629 6493 LAMC2 CSF CSF 3 0.3 Compared with controls CSF PGE 2 was higher in patients with mild memory impairment 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 168688 15512862 226133 20996 11179 SOD1 ALS ALS 3 1.2 Amyotrophic lateral sclerosis (ALS) ALS is a fatal paralytic neurodegenerative disorder 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000822418971594751<>ScoreDetail__5468|IGFALS|0.000180973638173373__11179|SOD1|0.000822418971594751__ 0 0 0 0 0 168689 15512862 226134 20996 11179 SOD1 ALS ALS 3 1.2 Experimental models of ALS such as the transgenic rodents expressing mutant superoxide dimutase-1 are 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000822418971594751<>ScoreDetail__5468|IGFALS|0.000180973638173373__11179|SOD1|0.000822418971594751__ 0 0 0 0 0 168690 15512862 226134 20996 11179 SOD1 ALS ALS 22 1.2 dimutase-1 are playing a pivotal role in our understanding of ALS pathogenesis and in our testing of new therapeutic interventions aimed 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000822418971594751<>ScoreDetail__5468|IGFALS|0.000180973638173373__11179|SOD1|0.000822418971594751__ 0 0 0 0 0 168691 15512862 226135 20996 11179 SOD1 ALS ALS 13 1.2 as a significant pathogenic factor in several neurodegenerative diseases including ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000822418971594751<>ScoreDetail__5468|IGFALS|0.000180973638173373__11179|SOD1|0.000822418971594751__ 0 0 0 0 0 168692 15512862 226136 20996 11179 SOD1 ALS ALS 26 1.2 and genetic interventions to be tested in experimental models of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000822418971594751<>ScoreDetail__5468|IGFALS|0.000180973638173373__11179|SOD1|0.000822418971594751__ 0 0 0 0 0 168693 15512862 226137 20996 11179 SOD1 ALS ALS 22 1.2 scientific basis for the development of effective neuroprotective therapies for ALS and Behavior Columbia University New York NY 10032 USA 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000822418971594751<>ScoreDetail__5468|IGFALS|0.000180973638173373__11179|SOD1|0.000822418971594751__ 0 0 0 0 0 161097 15571972 216578 20996 11179 SOD1 ALS ALS 11 1.0 crucial for lethal disorders such as amyotrophic lateral sclerosis (ALS) ALS and Huntington's disease (HD) HD for which no pharmacological or 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000974281109189134<>ScoreDetail__5468|IGFALS|0.000886173363494322__11179|SOD1|0.000974281109189134__ 0 0 0 0 0 161103 15571972 216643 20996 11179 SOD1 ALS ALS 3 1.0 Amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000974281109189134<>ScoreDetail__5468|IGFALS|0.000886173363494322__11179|SOD1|0.000974281109189134__ 0 0 0 0 0 161104 15571972 216644 20996 11179 SOD1 ALS ALS 15 1.0 reported a beneficial effect of minocycline in mouse models of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000974281109189134<>ScoreDetail__5468|IGFALS|0.000886173363494322__11179|SOD1|0.000974281109189134__ 0 0 0 0 0 161108 15571972 216647 11629 6493 LAMC2 CSF CSF 14 0.0 the protective effect that minocycline exerted against the neurotoxicity of CSF coming from patients carrying the SOD D90A mutation ( Tikka 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 161109 15571972 216650 3353 1368 CA1 CA1 CA1 17 0.0 of minocycline increased the number of surviving neurons in the CA1 pyramidal cell layer of gerbils submitted to a global ischemia 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 161116 15571972 216672 20996 11179 SOD1 ALS ALS 8 1.0 Minocycline is being tested in HD PD and ALS patients ( URL 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000974281109189134<>ScoreDetail__5468|IGFALS|0.000886173363494322__11179|SOD1|0.000974281109189134__ 0 0 0 0 0 161117 15571972 216673 20996 11179 SOD1 ALS ALS 21 1.0 any efficient therapies for devastating disorders such as HD and ALS these therapeutical trials are justified in these circumstances 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000974281109189134<>ScoreDetail__5468|IGFALS|0.000886173363494322__11179|SOD1|0.000974281109189134__ 0 0 0 0 0 161118 15571972 216680 20996 11179 SOD1 ALS ALS 7 1.0 A trial is also in progress for ALS patients 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000974281109189134<>ScoreDetail__5468|IGFALS|0.000886173363494322__11179|SOD1|0.000974281109189134__ 0 0 0 0 0 161119 15571972 216681 20996 11179 SOD1 ALS ALS 14 1.0 that minocycline is safe and well tolerated by patients with ALS with few side effects 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000974281109189134<>ScoreDetail__5468|IGFALS|0.000886173363494322__11179|SOD1|0.000974281109189134__ 0 0 0 0 0 161120 15571972 216687 20996 11179 SOD1 ALS ALS 29 1.0 these deleterious events have been or are being tested in ALS or HD patients ( Huntington Study Group 2001 Huntington Study 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000974281109189134<>ScoreDetail__5468|IGFALS|0.000886173363494322__11179|SOD1|0.000974281109189134__ 0 0 0 0 0 161122 15571972 216690 20996 11179 SOD1 ALS ALS 25 1.0 be very effective in the SOD1 G37R mouse model of ALS with a major increase of the mice life span of 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000974281109189134<>ScoreDetail__5468|IGFALS|0.000886173363494322__11179|SOD1|0.000974281109189134__ 0 0 0 0 0 161123 15571972 216692 20996 11179 SOD1 ALS ALS 13 1.0 with both creatine and minocycline which are clinically tested in ALS patients as a sole therapy significantly delayed disease onset and 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000974281109189134<>ScoreDetail__5468|IGFALS|0.000886173363494322__11179|SOD1|0.000974281109189134__ 0 0 0 0 0 161126 15571972 216709 20996 11179 SOD1 ALS ALS 26 1.0 worth to be tested in neurodegenerative disorders such as HD ALS and PD 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000974281109189134<>ScoreDetail__5468|IGFALS|0.000886173363494322__11179|SOD1|0.000974281109189134__ 0 0 0 0 0 161141 15572176 216716 20996 11179 SOD1 ALS ALS 18 1.9 upper and lower motor neurons and degenerating descending tracts of ALS patients 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161142 15572176 216717 20996 11179 SOD1 ALS ALS 3 1.9 Reactive astrocytes in ALS contain protein inclusions express inflammatory makers such as the inducible 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161146 15572176 216718 20996 11179 SOD1 ALS ALS 23 1.9 in the induction and propagation of motor neuron loss in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161149 15572176 216723 20996 11179 SOD1 ALS ALS 12 1.9 understanding of the interactions between motor neurons and glia in ALS may lead to a more accurate theory of the pathogenesis 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161150 15572176 216727 20996 11179 SOD1 ALS ALS 3 1.9 Amyotrophic lateral sclerosis (ALS) ALS is a neurodegenerative disease originally described by Charcot in 1869 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161151 15572176 216729 20996 11179 SOD1 ALS ALS 23 1.9 subtle changes in other cell types that may contribute to ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161152 15572176 216730 20996 11179 SOD1 ALS ALS 12 1.9 review we will consider the origin of reactive astrogliosis in ALS and how reactive changes in astrocytes may contribute to the 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161153 15572176 216730 20996 11179 SOD1 ALS ALS 26 1.9 changes in astrocytes may contribute to the progressive nature of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161154 15572176 216731 20996 11179 SOD1 ALS ALS 3 1.9 About 10% of ALS cases show familial inheritance 20% of which are caused by 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161156 15572176 216732 20996 11179 SOD1 ALS ALS 7 1.9 An important clue to the pathogenesis of ALS was provided by the development of several strains of different 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161160 15572176 216735 20996 11179 SOD1 ALS ALS-linked 5 1.9 However current evidence indicates that ALS-linked SOD-1 mutations must be expressed in both neuronal and non-neuronal 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161163 15572176 216736 20996 11179 SOD1 ALS ALS 28 1.9 muscle are required for mutated SOD-1 to initiate neurodegeneration in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161164 15572176 216737 20996 11179 SOD1 ALS ALS 23 1.9 mice composed of mixtures of normal cells and cells expressing ALS mutant SOD-1 showed that motor neuron degeneration is not necessarily 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161168 15572176 216747 20996 11179 SOD1 ALS ALS 52 1.9 it is not considered as a primary pathogenic element in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161169 15572176 216749 20996 11179 SOD1 ALS ALS 10 1.9 Extensive reviews have been recently published about the pathogenesis of ALS 12 25 and 110 the role of microglia and inflammatory 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161170 15572176 216749 20996 11179 SOD1 ALS ALS 26 1.9 and 110 the role of microglia and inflammatory cells in ALS 83 and the immune function of astrocytes 31 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161171 15572176 216751 20996 11179 SOD1 ALS ALS 9 1.9 Understanding of the interactions between neurons and glia in ALS may help to explain the progressive nature of ALS 2 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161172 15572176 216751 20996 11179 SOD1 ALS ALS 18 1.9 in ALS may help to explain the progressive nature of ALS 2 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161173 15572176 216752 20996 11179 SOD1 ALS ALS 3 1.9 Astrocyte pathology in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161174 15572176 216753 20996 11179 SOD1 ALS ALS 13 1.9 reaction typically surrounds both upper and lower motor neurons in ALS patients 59 71 87 90 and 120 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161175 15572176 216756 20996 11179 SOD1 ALS ALS 3 1.9 Reactive astrocytes in ALS show increased immunoreactivity for GFAP and the calcium binding protein 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161180 15572176 216758 20996 11179 SOD1 ALS ALS 15 1.9 changes has been described in the different animal models of ALS including mice and rats carrying different SOD-1 mutations 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161194 15572176 216770 20996 11179 SOD1 ALS ALS 16 1.9 pathology of the disease indicate that astrocytic activation occurs in ALS both in humans and animal models of the disease with 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161196 15572176 216776 20996 11179 SOD1 ALS ALS 5 1.9 The origin of astrocytosis in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161197 15572176 216777 20996 11179 SOD1 ALS ALS 1 1.9 Symptomatic ALS mice develop a typical _amp_#x201c isomorphic_amp_#x201d gliosis characterized by proliferative 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161198 15572176 216781 20996 11179 SOD1 ALS ALS 13 1.9 difficult to define the underlying causes of astrocytosis occurring in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161199 15572176 216782 20996 11179 SOD1 ALS ALS 22 1.9 might illustrate some of the mechanisms causing astrocyte reactivity in ALS 3.1 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161200 15572176 216784 20996 11179 SOD1 ALS ALS 0 1.9 ALS and related neurodegenerative diseases are closely associated with the aging 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161203 15572176 216792 20996 11179 SOD1 ALS ALS 24 1.9 neurons may constitute a potential mechanism for astrocyte activation in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161208 15572176 216797 10676 6121 IRF6 LPS LPS 8 0.6 A similar phenotype was induced by bacterial lipopolysaccharide (LPS), LPS a well-known inflammatory stimulus to glial cells 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 161209 15572176 216798 10676 6121 IRF6 LPS LPS 0 0.6 LPS stimulated iNOS expression and nitrotyrosine formation suggesting a role for 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 161222 15572176 216816 20996 11179 SOD1 ALS ALS 28 1.9 elicit a secondary glial response resembling astrocytic changes in presymptomatic ALS mouse and rat models 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161223 15572176 216822 20996 11179 SOD1 ALS ALS 3 1.9 In this perspective ALS might be caused in part by a defective crosstalk between 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161224 15572176 216823 20996 11179 SOD1 ALS ALS 6 1.9 Neurotoxic potential of reactive astrocytes in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161225 15572176 216824 20996 11179 SOD1 ALS ALS 13 1.9 emphasized the involvement of astrocyte dysfunction in the pathogenesis of ALS through different synergistic mechanisms 4.1 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161226 15572176 216826 20996 11179 SOD1 ALS ALS 1 1.9 Many ALS patients have elevated glutamate levels in cerebrospinal fluid and a 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161229 15572176 216828 20996 11179 SOD1 ALS ALS 3 1.9 In patients with ALS EAAT2 transporters are decreased or defective 108 and 114 which 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161236 15572176 216832 20996 11179 SOD1 ALS ALS 20 1.9 the significant reduction in the ability to transport glutamate in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161238 15572176 216833 20996 11179 SOD1 ALS ALS 10 1.9 The presence of aberrant mRNA splice variants for EAAT2 in ALS has been hypothesized as a putative cause of EAAT2 loss 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161240 15572176 216834 20996 11179 SOD1 ALS ALS 36 1.9 of astrocytosis suggesting that the loss of glutamate transporters in ALS may be secondary to astrocytic activation 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161241 15572176 216841 20996 11179 SOD1 ALS ALS 5 1.9 For example reactive astrocytes in ALS express COX-2 an enzyme that catalyzes the synthesis of the 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161243 15572176 216842 20996 11179 SOD1 ALS ALS 2 1.9 Treatment of ALS mice with the COX-2 inhibitor Celecoxib delayed the onset of 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161245 15572176 216845 20996 11179 SOD1 ALS ALS 1 1.9 In ALS neuroinflammatory changes can be observed through the entire motor system 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161246 15572176 216846 20996 11179 SOD1 ALS ALS 14 1.9 activation and its expression of some inflammatory mediators described in ALS the pathophysiological role of relevant cytokines and chemokines has remained 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161248 15572176 216848 20996 11179 SOD1 ALS ALS 31 1.9 in diverse forms of neurodegeneration which could be relevant in ALS pathophysiology 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161259 15572176 216854 10676 6121 IRF6 LPS LPS-treated 23 0.6 has been recently reported in the spinal cord of chronically LPS-treated mutant SOD1 mice 88 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 161263 15572176 216857 20996 11179 SOD1 ALS ALS 27 1.9 a role in initiating and modulating the inflammatory mechanisms in ALS explaining relevant features of the astrocyte pathology 4.3 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161264 15572176 216859 20996 11179 SOD1 ALS ALS 9 1.9 Free radical damage is a characteristic of pathologically affected ALS tissues 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161266 15572176 216861 10676 6121 IRF6 LPS LPS 6 0.6 In particular induction of iNOS by LPS or cytokines seems to be required for astrocytes to promote 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 161267 15572176 216864 10676 6121 IRF6 LPS LPS 22 0.6 monolayers of astrocytes that were first exposed to peroxynitrite or LPS 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 161268 15572176 216866 10676 6121 IRF6 LPS LPS 14 0.6 the motor neurons plated on astrocytes pretreated with peroxynitrite or LPS undergo apoptosis over the next 24 h 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 161271 15572176 216872 20996 11179 SOD1 ALS ALS 33 1.9 42 and 116 and in sporadic and familial cases of ALS 1 8 43 and 115 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161273 15572176 216876 20996 11179 SOD1 ALS ALS 4 1.9 Thus reactive astrocytes in ALS would not only impair neuronal excitability and neurotransmission but they 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161277 15572176 216879 20996 11179 SOD1 ALS ALS 12 1.9 could play a role in motor neuron loss observed in ALS without the direct involvement of the immune system 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161279 15572176 216881 20996 11179 SOD1 ALS ALS 29 1.9 44 and 45 little is known about its expression in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161284 15572176 216884 20996 11179 SOD1 ALS ALS-linked 7 1.9 Furthermore motor neurons from transgenic mice overexpressing ALS-linked SOD mutations G37R G85R or G93A display an increased susceptibility 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161312 15572176 216894 20996 11179 SOD1 ALS ALS 9 1.9 Moreover p75 NTR is found in motor neurons of ALS patients 80 and 121 suggesting that re-expression of the receptor 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161321 15572176 216898 20996 11179 SOD1 ALS ALS 10 1.9 However little is known about the expression of NGF in ALS although increased NGF levels were reported in muscle of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161323 15572176 216898 20996 11179 SOD1 ALS ALS 20 1.9 ALS although increased NGF levels were reported in muscle of ALS patients 72 and 127 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161327 15572176 216899 20996 11179 SOD1 ALS ALS 24 1.9 neurons may contribute to the induction of neuronal apoptosis in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161332 15572176 216900 20996 11179 SOD1 ALS ALS 47 1.9 increased NGF production may parallel the development of astrocytosis in ALS and contribute to motor neuron death 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161343 15572176 216904 20996 11179 SOD1 ALS ALS 14 1.9 role for a NGF/p75 NGF p75 NTR apoptotic pathway in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161357 15572176 216916 20996 11179 SOD1 ALS ALS 37 1.9 triggers a progressive motor neuron disease with the characteristics of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161358 15572176 216918 20996 11179 SOD1 ALS ALS 12 1.9 that these mechanisms are somehow critically and irreversibly disrupted in ALS 6 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161359 15572176 216920 20996 11179 SOD1 ALS ALS 3 1.9 The pathology of ALS is characterized by widespread signs of neuronal and astrocyte dysfunction 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161360 15572176 216923 20996 11179 SOD1 ALS ALS 5 1.9 Because reactive astrocytes occurring in ALS may spread the phenotypic transformation to astrocytes located in adjacent 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161361 15572176 216927 20996 11179 SOD1 ALS ALS 9 1.9 Deciphering the interactions between motor neurons and glia in ALS may reveal the basis for the progressive pathogenesis of the 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 161362 15572176 216929 20996 11179 SOD1 ALS ALS 10 1.9 Proposed pathogenic steps involving astrocyte to motor neuron signaling in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000806718321836908<>ScoreDetail__5468|IGFALS|0.000350557049558202__11179|SOD1|0.000806718321836908__ 0 0 0 0 0 155370 15649489 206195 20996 11179 SOD1 ALS ALS 19 1.7 the pathogenesis of motoneuron death in amyotrophic lateral sclerosis (ALS) ALS both in humans and transgenic mouse models 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00150977120752612<>ScoreDetail__5468|IGFALS|0.000376251034690345__11179|SOD1|0.00150977120752612__ 0 0 0 0 0 155375 15649489 206198 20996 11179 SOD1 ALS ALS 21 1.7 PPAR-_amp_#x3b3 agonist in the G93A SOD1 transgenic mouse model of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00150977120752612<>ScoreDetail__5468|IGFALS|0.000376251034690345__11179|SOD1|0.00150977120752612__ 0 0 0 0 0 155379 15649489 206202 20996 11179 SOD1 ALS ALS 11 1.7 results suggest that pioglitazone may have therapeutic potential for human ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00150977120752612<>ScoreDetail__5468|IGFALS|0.000376251034690345__11179|SOD1|0.00150977120752612__ 0 0 0 0 0 155380 15649489 206204 20996 11179 SOD1 ALS ALS 3 1.7 Amyotrophic lateral sclerosis (ALS) ALS is one of the most common adult onset neurodegenerative diseases 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00150977120752612<>ScoreDetail__5468|IGFALS|0.000376251034690345__11179|SOD1|0.00150977120752612__ 0 0 0 0 0 155382 15649489 206205 20996 11179 SOD1 ALS ALS 33 1.7 SOD1 in a subset of patients with autosomal dominant inherited ALS ( Rosen et al. 1993 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00150977120752612<>ScoreDetail__5468|IGFALS|0.000376251034690345__11179|SOD1|0.00150977120752612__ 0 0 0 0 0 155383 15649489 206207 20996 11179 SOD1 ALS ALS 14 1.7 demonstrated that activated microglia occur in transgenic mouse models of ALS ( Hall et al. 1998 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00150977120752612<>ScoreDetail__5468|IGFALS|0.000376251034690345__11179|SOD1|0.00150977120752612__ 0 0 0 0 0 155391 15649489 206217 14535 7873 NOS2A iNOS iNOS-positive 9 3.2 Pioglitazone treatment reduced activation of microglia reduced induction of iNOS-positive cells and less glial fibrillary acidic protein-positive cells in both 1 JUMiner_v2.2 1 2 32 0 0 0 0 0 0 0 0 155394 15649489 206218 20996 11179 SOD1 ALS ALS 26 1.7 disease process in the G93A SOD1 transgenic mouse model of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00150977120752612<>ScoreDetail__5468|IGFALS|0.000376251034690345__11179|SOD1|0.00150977120752612__ 0 0 0 0 0 155395 15649489 206221 20996 11179 SOD1 ALS ALS 3 1.7 G93A transgenic familial ALS mice (high high expresser line ( Gurney 1994 were obtained 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00150977120752612<>ScoreDetail__5468|IGFALS|0.000376251034690345__11179|SOD1|0.00150977120752612__ 0 0 0 0 0 155398 15649489 206248 11763 6553 LEP LEP LEP 17 0.0 of a Nikon Eclipse E600 microscope equipped with a computer-controlled LEP BioPoint motorized stage a DEI-750 video camera a Dell Dimension 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 155409 15649489 206284 20996 11179 SOD1 ALS ALS 11 1.7 is increasing evidence that inflammatory mechanisms play a role in ALS pathogenesis 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00150977120752612<>ScoreDetail__5468|IGFALS|0.000376251034690345__11179|SOD1|0.00150977120752612__ 0 0 0 0 0 155411 15649489 206286 20996 11179 SOD1 ALS ALS 15 1.7 and iNOS levels are increased in transgenic mouse models of ALS ( Almer et al. 1999 Elliott 2001 Ghezzi et al. 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00150977120752612<>ScoreDetail__5468|IGFALS|0.000376251034690345__11179|SOD1|0.00150977120752612__ 0 0 0 0 0 155412 15649489 206287 20996 11179 SOD1 ALS ALS 13 1.7 activation slowed disease progression in one transgenic mouse model of ALS ( Friedlander et al. 1998 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00150977120752612<>ScoreDetail__5468|IGFALS|0.000376251034690345__11179|SOD1|0.00150977120752612__ 0 0 0 0 0 155417 15649489 206291 10444 5993 IL1R1 IL1RA IL1-RA 3 0.0 IL-_amp_#x3b2 IL-1_amp_#x3b2 and IL1-RA are increased at 80 days and multiple caspase and death 11 JUMiner_v2.2 1 0 0 2 6000 TotalCon:2<>5993|IL1R1|3554|Complete__6000|IL1RN|3557|Complete__<>AvaiableGeneRif=2<>BEST:6000|IL1RN|0.000183493733979586<>ScoreDetail__5993|IL1R1|0.000136263904125759__6000|IL1RN|0.000183493733979586__ 0 0 0 0 0 155418 15649489 206299 14535 7873 NOS2A iNOS iNOS-positive 4 3.2 It reduced induction of iNOS-positive cells and there was less glial fibrillary acidic protein-positive cells 1 JUMiner_v2.2 1 2 32 0 0 0 0 0 0 0 0 155420 15649489 206300 8569 16769 GORASP1 P65 P65 25 0.0 inhibition of translocation of nuclear factor _amp_#x3ba -_amp_#x3b2 _amp_#xa0 subunit P65 to the nucleus in the dopaminergic neurons and glial cells 1 JUMiner_v2.2 1 0 0 2 16769 TotalCon:2<>16769|GORASP1|64689|Complete__11509|SYT1|6857|Complete__<>AvaiableGeneRif=2<>BEST:16769|GORASP1|0.000327398191754602<>ScoreDetail__16769|GORASP1|0.000327398191754602__11509|SYT1|0.000159201867968584__ 0 0 0 0 0 155428 15649489 206311 20996 11179 SOD1 ALS ALS 20 1.7 may be an effective strategy for ameliorating the progression of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00150977120752612<>ScoreDetail__5468|IGFALS|0.000376251034690345__11179|SOD1|0.00150977120752612__ 0 0 0 0 0 155429 15649489 206313 20996 11179 SOD1 ALS ALS 18 1.7 could readily become an agent worthy of testing in human ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00150977120752612<>ScoreDetail__5468|IGFALS|0.000376251034690345__11179|SOD1|0.00150977120752612__ 0 0 0 0 0 156440 15657392 207605 20996 11179 SOD1 ALS ALS 3 2.2 Amyotrophic lateral sclerosis (ALS) ALS is a progressive neurodegenerative disease characterized by a selective degeneration 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00171098438242487<>ScoreDetail__5468|IGFALS|0.000488478876777714__11179|SOD1|0.00171098438242487__ 0 0 0 0 0 156441 15657392 207606 20996 11179 SOD1 ALS ALS 6 2.2 Although a significant proportion of familial ALS results from a toxic gain of function associated with dominant 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00171098438242487<>ScoreDetail__5468|IGFALS|0.000488478876777714__11179|SOD1|0.00171098438242487__ 0 0 0 0 0 156447 15657392 207610 20996 11179 SOD1 ALS ALS 8 2.2 Abbreviations used in this paper AChR acetylcholine receptor ALS amyotrophic lateral sclerosis CnA calcineurin GFAP glial fibrillary acidic protein 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00171098438242487<>ScoreDetail__5468|IGFALS|0.000488478876777714__11179|SOD1|0.00171098438242487__ 0 0 0 0 0 156453 15657392 207612 20996 11179 SOD1 ALS ALS 3 2.2 Amyotrophic lateral sclerosis (ALS) ALS is a fatal neuromuscular disorder involving the degeneration of motor 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00171098438242487<>ScoreDetail__5468|IGFALS|0.000488478876777714__11179|SOD1|0.00171098438242487__ 0 0 0 0 0 156455 15657392 207613 20996 11179 SOD1 ALS ALS 12 2.2 ubiquitously overexpressing human SOD1 mutants develop motor neuron disease resembling ALS ( Gurney et al. 1994 and provide useful model to 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00171098438242487<>ScoreDetail__5468|IGFALS|0.000488478876777714__11179|SOD1|0.00171098438242487__ 0 0 0 0 0 156457 15657392 207614 20996 11179 SOD1 ALS ALS-associated 36 2.2 2002 suggesting that other cell types may be involved in ALS-associated neurodegeneration 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00171098438242487<>ScoreDetail__5468|IGFALS|0.000488478876777714__11179|SOD1|0.00171098438242487__ 0 0 0 0 0 156477 15657392 207629 38 22 AAVS1 AAV AAV 14 0.9 delivered either as an inherited transgene or somatically on an AAV vector induces muscle hypertrophy and strength and preserves regenerative capacity 1 JUMiner_v2.2 1 2 aav vector 0 0 0 0 0 0 0 0 156478 15657392 207630 20996 11179 SOD1 ALS ALS 16 2.2 skeletal muscle as a primary target in inherited forms of ALS by showing that localized expression of the coinherited MLC/mIgf-1 MLC 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00171098438242487<>ScoreDetail__5468|IGFALS|0.000488478876777714__11179|SOD1|0.00171098438242487__ 0 0 0 0 0 156481 15657392 207630 20996 11179 SOD1 ALS ALS 39 2.2 the skeletal muscle of SOD1 mice counteracted the symptoms of ALS induced satellite cell activity stabilized neuromuscular junctions and led to 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00171098438242487<>ScoreDetail__5468|IGFALS|0.000488478876777714__11179|SOD1|0.00171098438242487__ 0 0 0 0 0 156484 15657392 207631 20996 11179 SOD1 ALS ALS 25 2.2 importance of Igf-1 isoform selection when designing therapeutic strategies for ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00171098438242487<>ScoreDetail__5468|IGFALS|0.000488478876777714__11179|SOD1|0.00171098438242487__ 0 0 0 0 0 156584 15657392 207697 16100 8621 PAX7 PAX7 Pax-7 9 0.0 In addition markers of satellite cell activity such as Pax-7 and desmin were increased to varying extents in affected SOD 11 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 156585 15657392 207697 16100 8621 PAX7 PAX7 Pax-7 43 0.0 maturation including centralized nuclei ( Fig 2 a yellow arrows Pax-7 isoforms desmin myogenin and neonatal myosin heavy chain (MyHC) MyHC 11 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 156592 15657392 207702 20996 11179 SOD1 ALS ALS 31 2.2 support the hypothesis that delaying the progression and severity of ALS disease may depend on the maintenance of muscle integrity 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00171098438242487<>ScoreDetail__5468|IGFALS|0.000488478876777714__11179|SOD1|0.00171098438242487__ 0 0 0 0 0 156597 15657392 207706 20996 11179 SOD1 ALS ALS 28 2.2 an alternate therapeutic approach to counteract muscle wasting associated with ALS disease 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00171098438242487<>ScoreDetail__5468|IGFALS|0.000488478876777714__11179|SOD1|0.00171098438242487__ 0 0 0 0 0 156623 15657392 207726 20996 11179 SOD1 ALS ALS 47 2.2 mIgf-1 expression preserves the motor neuron during the progression of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00171098438242487<>ScoreDetail__5468|IGFALS|0.000488478876777714__11179|SOD1|0.00171098438242487__ 0 0 0 0 0 156624 15657392 207727 20996 11179 SOD1 ALS ALS 10 2.2 One of the prominent markers of motor neuron dysfunction in ALS mice is the activation of astrocytes leading to motor weakness 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00171098438242487<>ScoreDetail__5468|IGFALS|0.000488478876777714__11179|SOD1|0.00171098438242487__ 0 0 0 0 0 156645 15657392 207733 20996 11179 SOD1 ALS ALS 47 2.2 astrocytosis and inflammatory cytokines that normally exacerbate the pathogenesis of ALS disease 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00171098438242487<>ScoreDetail__5468|IGFALS|0.000488478876777714__11179|SOD1|0.00171098438242487__ 0 0 0 0 0 156646 15657392 207734 20996 11179 SOD1 ALS ALS 0 2.2 ALS is emerging as a multi-systemic disease in which the alteration 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00171098438242487<>ScoreDetail__5468|IGFALS|0.000488478876777714__11179|SOD1|0.00171098438242487__ 0 0 0 0 0 156652 15657392 207743 20996 11179 SOD1 ALS ALS 37 2.2 counteract the degeneration of both muscle and motor neuron in ALS disease 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00171098438242487<>ScoreDetail__5468|IGFALS|0.000488478876777714__11179|SOD1|0.00171098438242487__ 0 0 0 0 0 156660 15657392 207760 1759 1102 BRD1 BRL BRL 8 0.3 RNA was extracted from muscles by RNA-TRIzol-kit (GIBCO GIBCO BRL 1 JUMiner_v2.2 1 2 gibco brl 0 0 0 0 0 0 0 0 156665 15657392 207767 19573 10691 SDS SDS SDS 11 0.0 amounts of protein from each muscle lysate were separated in SDS polyacrylamide gel and transferred onto a hybond C extra nitrocellulose 1 JUMiner_v2.2 1 0 0 2 19440 TotalCon:2<>10691|SDS|10993|Complete__19440|SBDS|51119|Complete__<>AvaiableGeneRif=2<>BEST:19440|SBDS|0.000407140221636958<>ScoreDetail__10691|SDS|0.000301114122252334__19440|SBDS|0.000407140221636958__ 0 0 0 0 0 157135 15668976 208352 9947 5468 IGFALS ALS ALS 8 0.3 The causative pathomechanism of sporadic amyotrophic lateral sclerosis (ALS) ALS is not clearly understood 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00125566384543045<>ScoreDetail__5468|IGFALS|0.00103406326034063__11179|SOD1|0.00125566384543045__ 0 0 0 0 0 157136 15668976 208353 9947 5468 IGFALS ALS ALS 21 0.3 degenerating spinal motor neurons isolated from autopsied patients with sporadic ALS were examined 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00125566384543045<>ScoreDetail__5468|IGFALS|0.00103406326034063__11179|SOD1|0.00125566384543045__ 0 0 0 0 0 157141 15668976 208362 9947 5468 IGFALS ALS ALS 8 0.3 The motor neuron-specific gene expression profile in sporadic ALS can provide direct information on the genes leading to neurodegeneration 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00125566384543045<>ScoreDetail__5468|IGFALS|0.00103406326034063__11179|SOD1|0.00125566384543045__ 0 0 0 0 0 157731 15691215 209294 20996 11179 SOD1 ALS ALS 3 1.4 Amyotrophic lateral sclerosis (ALS) ALS is a progressive neurodegenerative disease for which no cure or 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00128599243576359<>ScoreDetail__5468|IGFALS|0.000890990713135259__11179|SOD1|0.00128599243576359__ 0 0 0 0 0 157732 15691215 209296 20996 11179 SOD1 ALS ALS 7 1.4 The discovery that a small percentage of ALS cases are familial and involve mutation in a superoxide dismutase 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00128599243576359<>ScoreDetail__5468|IGFALS|0.000890990713135259__11179|SOD1|0.00128599243576359__ 0 0 0 0 0 150946 15777251 199027 20996 11179 SOD1 ALS ALS 21 0.0 PD Alzheimer's disease (AD) AD or amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000720315629212073<>ScoreDetail__5468|IGFALS|0.000377165930823331__11179|SOD1|0.000720315629212073__ 0 0 0 0 0 150961 15782606 199052 20996 11179 SOD1 ALS ALS 9 0.0 Primary progressive multiple sclerosis as a differential diagnosis of ALS a case report 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000465747863617697<>ScoreDetail__5468|IGFALS|0.000403027181944382__11179|SOD1|0.000465747863617697__ 0 0 0 0 0 150962 15782606 199056 20996 11179 SOD1 ALS ALS 15 0.0 and decreased number of motor units in the extremities suggesting ALS 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000465747863617697<>ScoreDetail__5468|IGFALS|0.000403027181944382__11179|SOD1|0.000465747863617697__ 0 0 0 0 0 150964 15782606 199057 5142 2537 CTSL1 MEP MEP 15 0.0 head and spinal MRI a prolonged central conduction time of MEP and SEP a delayed P100 latency of VEP and a 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 150965 15782606 199057 13321 14668 MMEL1 SEP SEP 17 0.0 spinal MRI a prolonged central conduction time of MEP and SEP a delayed P100 latency of VEP and a increased IgG 1 JUMiner_v2.2 1 0 0 1 0 TotalCon:2<>14668|MMEL1|79258|No_GeneRif__9103|PLXNB1|5364|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 150966 15782606 199057 11629 6493 LAMC2 CSF CSF 31 0.0 latency of VEP and a increased IgG index in the CSF indicated primary progressive type multiple sclerosis 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 150967 15782606 199059 20996 11179 SOD1 ALS ALS-like 22 0.0 the anterior horn cells/intramedullary cells intramedullary ventral roots explained the ALS-like clinical picture 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000465747863617697<>ScoreDetail__5468|IGFALS|0.000403027181944382__11179|SOD1|0.000465747863617697__ 0 0 0 0 0 151001 15799549 199163 20996 11179 SOD1 ALS ALS 14 0.0 markers in affected neural tissues of amyotrophic lateral sclerosis (ALS) ALS patients 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000936474939593148<>ScoreDetail__5468|IGFALS|0.00019208605455244__11179|SOD1|0.000936474939593148__ 0 0 0 0 0 151002 15799549 199164 20996 11179 SOD1 ALS ALS 10 0.0 We examined immunocytochemically spinal cord tissues of six patients with ALS two with corticospinal tract degeneration secondary to cerebral infarcts and 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000936474939593148<>ScoreDetail__5468|IGFALS|0.00019208605455244__11179|SOD1|0.000936474939593148__ 0 0 0 0 0 151003 15799549 199165 20996 11179 SOD1 ALS ALS 0 0.0 ALS spinal cords had dense macrophage infiltration (one one log greater 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000936474939593148<>ScoreDetail__5468|IGFALS|0.00019208605455244__11179|SOD1|0.000936474939593148__ 0 0 0 0 0 151005 15799549 199166 20996 11179 SOD1 ALS ALS 2 0.0 Macrophages in ALS spinal cord showed strong expression of cyclooxygenase-2 (COX-2) COX-2 (one 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000936474939593148<>ScoreDetail__5468|IGFALS|0.00019208605455244__11179|SOD1|0.000936474939593148__ 0 0 0 0 0 151009 15799549 199169 20996 11179 SOD1 ALS ALS 0 0.0 ALS spinal cords but not control cords were sparsely infiltrated with 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000936474939593148<>ScoreDetail__5468|IGFALS|0.00019208605455244__11179|SOD1|0.000936474939593148__ 0 0 0 0 0 151011 15799549 199171 20996 11179 SOD1 ALS ALS 6 0.0 Our data suggest that inflammation in ALS spinal cord and cortex is based on innate immune responses 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000936474939593148<>ScoreDetail__5468|IGFALS|0.00019208605455244__11179|SOD1|0.000936474939593148__ 0 0 0 0 0 151248 15804265 199551 20996 11179 SOD1 ALS ALS 11 1.7 of intraperitoneal injection of Rofecoxib in a mouse model of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00103560857600355<>ScoreDetail__5468|IGFALS|0.00059183270862103__11179|SOD1|0.00103560857600355__ 0 0 0 0 0 151249 15804265 199552 20996 11179 SOD1 ALS ALS 16 1.7 are involved in the pathogenesis of amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00103560857600355<>ScoreDetail__5468|IGFALS|0.00059183270862103__11179|SOD1|0.00103560857600355__ 0 0 0 0 0 151251 15804265 199553 20996 11179 SOD1 ALS ALS 16 1.7 cyclooxygenase 2 (COX-2), COX-2 represents a promising therapeutic approach in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00103560857600355<>ScoreDetail__5468|IGFALS|0.00059183270862103__11179|SOD1|0.00103560857600355__ 0 0 0 0 0 151254 15804265 199554 20996 11179 SOD1 ALS ALS 28 1.7 SOD1 G93A G1H mouse model of the familial form of ALS (fALS) fALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00103560857600355<>ScoreDetail__5468|IGFALS|0.00059183270862103__11179|SOD1|0.00103560857600355__ 0 0 0 0 0 151255 15804265 199555 21239 11280 SQSTM1 P60 P60 7 0.0 Rofecoxib administration commenced at postnatal day 60 (P60), P60 since the hallmarks of inflammation in the spinal cord were 1 JUMiner_v2.2 1 0 0 2 11916 TotalCon:4<>11280|SQSTM1|8878|Complete__11916|TNFRSF1A|7132|Complete__13209|ARHGEF5|7984|Complete__11387|STIP1|10963|Complete__<>AvaiableGeneRif=4<>BEST:11916|TNFRSF1A|0.00038587446428289<>ScoreDetail__11916|TNFRSF1A|0.00038587446428289__11387|STIP1|0__13209|ARHGEF5|0__11280|SQSTM1|0.000321300321300321__ 0 0 0 0 0 153856 15846792 203807 20996 11179 SOD1 ALS ALS 19 0.0 microglia in an adult-onset neurodegenerative disease amyotrophic lateral sclerosis (ALS), ALS and pays particular attention to the possible mechanisms of initiation 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00104727707959306<>ScoreDetail__5468|IGFALS|0.00032441200324412__11179|SOD1|0.00104727707959306__ 0 0 0 0 0 153857 15846792 203809 20996 11179 SOD1 ALS ALS 10 0.0 The neuroinflammatory changes that occur in a mouse model of ALS are summarized 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00104727707959306<>ScoreDetail__5468|IGFALS|0.00032441200324412__11179|SOD1|0.00104727707959306__ 0 0 0 0 0 147157 15962273 193995 20996 11179 SOD1 ALS ALS 13 0.0 microglia in the spinal cord of amyotrophic lateral sclerosis (ALS) ALS patients is usually accompanied by inflammatory biochemical changes but these 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000879667751065275<>ScoreDetail__5468|IGFALS|0.000768344218209758__11179|SOD1|0.000879667751065275__ 0 0 0 0 0 147160 15962273 193997 11629 6493 LAMC2 CSF CSF 13 0.0 by an enzyme-linked immunosorbent assay in the cerebrospinal fluid (CSF) CSF and the serum of 27 patients with ALS and 30 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 147161 15962273 193997 20996 11179 SOD1 ALS ALS 21 0.0 fluid (CSF) CSF and the serum of 27 patients with ALS and 30 patients with noninflammatory neurological diseases 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000879667751065275<>ScoreDetail__5468|IGFALS|0.000768344218209758__11179|SOD1|0.000879667751065275__ 0 0 0 0 0 147163 15962273 193998 20996 11179 SOD1 ALS ALS 1 0.1 In ALS circulating MCP-1 levels were significantly increased in the serum and 6 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000879667751065275<>ScoreDetail__5468|IGFALS|0.000768344218209758__11179|SOD1|0.000879667751065275__ 0 0 0 0 0 147164 15962273 193998 11629 6493 LAMC2 CSF CSF 15 0.0 were significantly increased in the serum and particularly in the CSF 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 147166 15962273 193999 20996 11179 SOD1 ALS ALS 4 0.1 Immunoreactivity for MCP-1 in ALS spinal cord was detected mostly in astrocytes but also in 6 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000879667751065275<>ScoreDetail__5468|IGFALS|0.000768344218209758__11179|SOD1|0.000879667751065275__ 0 0 0 0 0 147168 15962273 194000 20996 11179 SOD1 ALS ALS 17 0.0 as an important molecular mediator of the injury response in ALS 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000879667751065275<>ScoreDetail__5468|IGFALS|0.000768344218209758__11179|SOD1|0.000879667751065275__ 0 0 0 0 0 135211 16014720 179157 6981 22140 FAM20C RNS RNS 15 0.0 degradation product NO 2 to generate reactive nitrogen species (RNS) RNS (van van der Vliet et al. 1997 and studies of 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 135230 16014720 179196 20996 11179 SOD1 ALS ALS 34 0.3 and the frontal motor cortex for amyotrophic lateral sclerosis (ALS) ALS or motor neuron disease and controls 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00056102382469375<>ScoreDetail__5468|IGFALS|0.000352634551292419__11179|SOD1|0.00056102382469375__ 0 0 0 0 0 135231 16014720 179197 20996 11179 SOD1 ALS ALS 20 0.3 neuropathological diagnoses using the criteria for definite PD HD and ALS outlined in the supplemental material (available available at www.jneurosci.org 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00056102382469375<>ScoreDetail__5468|IGFALS|0.000352634551292419__11179|SOD1|0.00056102382469375__ 0 0 0 0 0 135234 16014720 179202 13412 7214 MPHOSPH6 MPP MPP 2 0.0 Striatal 1-methyl-4-phenylpyridinium (MPP MPP levels were determined by HPLC with UV detection ( = 1 JUMiner_v2.2 1 0 0 2 7214 TotalCon:2<>7214|MPHOSPH6|10200|Complete__7225|MPZ|4359|Complete__<>AvaiableGeneRif=2<>BEST:7214|MPHOSPH6|0.000481293134762078<>ScoreDetail__7214|MPHOSPH6|0.000481293134762078__7225|MPZ|0.000398765781984089__ 0 0 0 0 0 135235 16014720 179203 13412 7214 MPHOSPH6 MPP MPP 6 0.0 Striatal tissue lactate production induced by MPP and synaptosomal uptake of H MPP were performed as described 1 JUMiner_v2.2 1 0 0 2 7214 TotalCon:2<>7214|MPHOSPH6|10200|Complete__7225|MPZ|4359|Complete__<>AvaiableGeneRif=2<>BEST:7214|MPHOSPH6|0.000481293134762078<>ScoreDetail__7214|MPHOSPH6|0.000481293134762078__7225|MPZ|0.000398765781984089__ 0 0 0 0 0 135236 16014720 179203 13412 7214 MPHOSPH6 MPP MPP 12 0.0 lactate production induced by MPP and synaptosomal uptake of H MPP were performed as described previously (Wu Wu et al. 2003 1 JUMiner_v2.2 1 0 0 2 7214 TotalCon:2<>7214|MPHOSPH6|10200|Complete__7225|MPZ|4359|Complete__<>AvaiableGeneRif=2<>BEST:7214|MPHOSPH6|0.000481293134762078<>ScoreDetail__7214|MPHOSPH6|0.000481293134762078__7225|MPZ|0.000398765781984089__ 0 0 0 0 0 135237 16014720 179208 1552 30000 BBS9 C18 C-18 7 0.0 The amino acids were isolated using a C-18 solid-phase extraction column and subjected to derivatization and analysis by 11 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 135258 16014720 179234 20996 11179 SOD1 ALS ALS 12 0.3 assessments performed in two other neurodegenerative diseases namely HD and ALS it appears that MPO upregulation in the brain is not 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00056102382469375<>ScoreDetail__5468|IGFALS|0.000352634551292419__11179|SOD1|0.00056102382469375__ 0 0 0 0 0 135275 16014720 179254 8254 4235 GFAP GFAP GFAP-positive 15 2.5 (blue) blue is not detected in control tissues neither in GFAP-positive cells (open open arrow nor in or around neuromelanized dopaminergic 1 JUMiner_v2.2 1 2 32 0 0 0 0 0 0 0 0 135277 16014720 179255 8254 4235 GFAP GFAP GFAP-positive 12 2.5 MPO immunoreactivity (blue, blue small black arrow is found in GFAP-positive cells (open open arrow in PD tissue but not in 1 JUMiner_v2.2 1 2 32 0 0 0 0 0 0 0 0 135286 16014720 179272 13419 7218 MPO MPO MPO-positive 1 1.0 These MPO-positive cells showed punctate immunoreactivity over both the cell bodies and 1 JUMiner_v2.2 1 2 32 0 0 0 0 0 0 0 0 135303 16014720 179287 20996 11179 SOD1 ALS ALS 7 0.3 Compared with controls the motor cortex from ALS patients did not exhibit higher GFAP or MPO values (data 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00056102382469375<>ScoreDetail__5468|IGFALS|0.000352634551292419__11179|SOD1|0.00056102382469375__ 0 0 0 0 0 135325 16014720 179300 13412 7214 MPHOSPH6 MPP MPP 12 0.0 controlling MPTP neurotoxicity are its conversion in the brain to MPP followed by MPP entry into dopaminergic neurons and its subsequent 1 JUMiner_v2.2 1 0 0 2 7214 TotalCon:2<>7214|MPHOSPH6|10200|Complete__7225|MPZ|4359|Complete__<>AvaiableGeneRif=2<>BEST:7214|MPHOSPH6|0.000481293134762078<>ScoreDetail__7214|MPHOSPH6|0.000481293134762078__7225|MPZ|0.000398765781984089__ 0 0 0 0 0 135326 16014720 179300 13412 7214 MPHOSPH6 MPP MPP 16 0.0 are its conversion in the brain to MPP followed by MPP entry into dopaminergic neurons and its subsequent blockade of mitochondrial 1 JUMiner_v2.2 1 0 0 2 7214 TotalCon:2<>7214|MPHOSPH6|10200|Complete__7225|MPZ|4359|Complete__<>AvaiableGeneRif=2<>BEST:7214|MPHOSPH6|0.000481293134762078<>ScoreDetail__7214|MPHOSPH6|0.000481293134762078__7225|MPZ|0.000398765781984089__ 0 0 0 0 0 135329 16014720 179302 13412 7214 MPHOSPH6 MPP MPP 6 0.0 Results show that striatal levels of MPP striatal uptake of H MPP and MPP -induced lactate production 1 JUMiner_v2.2 1 0 0 2 7214 TotalCon:2<>7214|MPHOSPH6|10200|Complete__7225|MPZ|4359|Complete__<>AvaiableGeneRif=2<>BEST:7214|MPHOSPH6|0.000481293134762078<>ScoreDetail__7214|MPHOSPH6|0.000481293134762078__7225|MPZ|0.000398765781984089__ 0 0 0 0 0 135330 16014720 179302 13412 7214 MPHOSPH6 MPP MPP 12 0.0 show that striatal levels of MPP striatal uptake of H MPP and MPP -induced lactate production (a a measure of mitochondrial 1 JUMiner_v2.2 1 0 0 2 7214 TotalCon:2<>7214|MPHOSPH6|10200|Complete__7225|MPZ|4359|Complete__<>AvaiableGeneRif=2<>BEST:7214|MPHOSPH6|0.000481293134762078<>ScoreDetail__7214|MPHOSPH6|0.000481293134762078__7225|MPZ|0.000398765781984089__ 0 0 0 0 0 135331 16014720 179302 13412 7214 MPHOSPH6 MPP MPP 15 0.0 striatal levels of MPP striatal uptake of H MPP and MPP -induced lactate production (a a measure of mitochondrial function did 1 JUMiner_v2.2 1 0 0 2 7214 TotalCon:2<>7214|MPHOSPH6|10200|Complete__7225|MPZ|4359|Complete__<>AvaiableGeneRif=2<>BEST:7214|MPHOSPH6|0.000481293134762078<>ScoreDetail__7214|MPHOSPH6|0.000481293134762078__7225|MPZ|0.000398765781984089__ 0 0 0 0 0 135354 16014720 179333 6981 22140 FAM20C RNS RNS 15 0.0 known for its production of cytotoxic reactive oxygen species and RNS (Harrison Harrison and Schultz 1976 Eiserich et al. 1996 Hampton 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 135355 16014720 179334 13419 7218 MPO MPO MPO-containing 7 1.0 Therefore neurons located in the vicinity of MPO-containing cells may have their plasma membrane proteins and lipids subjected 1 JUMiner_v2.2 1 2 32 0 0 0 0 0 0 0 0 140248 16101543 184879 20996 11179 SOD1 ALS ALS 12 0.0 such as Parkinson's disease Alzheimer's disease amyotrophic lateral sclerosis (ALS), ALS Huntington stroke head trauma and infection are associated with inflammation 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000657028209296694<>ScoreDetail__5468|IGFALS|0.000261726815366272__11179|SOD1|0.000657028209296694__ 0 0 0 0 0 140317 16104843 184928 23910 12680 VEGFA VEGF VEGF-producing 13 5.8 is known about how VEGF isoform levels are regulated most VEGF-producing cells appear to preferentially express VEGF 121 VEGF 165 and 1 JUMiner_v2.2 1 2 32 0 0 0 0 0 0 0 0 140324 16104843 184931 13346 7178 MMRN1 ECM ECM 21 0.3 6 binds heparin strongly and is completely sequestered in the ECM (extracellular extracellular matrix and to a lesser extent at the 3 JUMiner_v2.2 1 2 extracellular matrix 0 0 0 0 0 0 0 0 140365 16104843 184952 6559 3312 ELAVL1 HuR HuR 0 0.6 HuR an AU-rich element binding protein and PAIP2 polyadenylated-binding protein-interacting protein 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 140369 16104843 184954 20149 10919 SLC14A2 UTR UTR 6 0.3 It has been shown that the 5_amp_#180 -UTR of VEGF mRNA contains two functional internal ribosome entry sites 11 JUMiner_v2.2 1 2 untranslated region 0 2 4468 TotalCon:2<>10919|SLC14A2|8170|Complete__4468|UTS2R|2837|Complete__<>AvaiableGeneRif=2<>BEST:4468|UTS2R|0.000718341656974755<>ScoreDetail__10919|SLC14A2|0.000381768999132343__4468|UTS2R|0.000718341656974755__ 0 0 0 0 0 140450 16104843 184990 1860 18380 BZW1 ORF Orf 13 0.3 have also been identified in the genome of the parapoxvirus Orf virus 54 and have been shown to have VEGF-A-like activities 2 JUMiner_v2.2 1 2 orf 0 2 18380 TotalCon:2<>18380|BZW1|9689|Complete__11866|TMEFF1|8577|Complete__<>AvaiableGeneRif=2<>BEST:18380|BZW1|0.000784719032307457<>ScoreDetail__18380|BZW1|0.000784719032307457__11866|TMEFF1|0.000674666972898484__ 0 0 0 0 0 140453 16104843 184991 1860 18380 BZW1 ORF Orf 16 0.3 group of these proteins including VEGF-E NZ-2 (VEGF VEGF from Orf virus strain NZ-2 55 VEGF-E NZ-7 (VEGF VEGF from Orf 2 JUMiner_v2.2 1 2 orf 0 2 18380 TotalCon:2<>18380|BZW1|9689|Complete__11866|TMEFF1|8577|Complete__<>AvaiableGeneRif=2<>BEST:18380|BZW1|0.000784719032307457<>ScoreDetail__18380|BZW1|0.000784719032307457__11866|TMEFF1|0.000674666972898484__ 0 0 0 0 0 140455 16104843 184991 1860 18380 BZW1 ORF Orf 27 0.3 Orf virus strain NZ-2 55 VEGF-E NZ-7 (VEGF VEGF from Orf virus strain NZ-7 56 VEGF-E NZ-10 (VEGF VEGF from Orf 2 JUMiner_v2.2 1 2 orf 0 2 18380 TotalCon:2<>18380|BZW1|9689|Complete__11866|TMEFF1|8577|Complete__<>AvaiableGeneRif=2<>BEST:18380|BZW1|0.000784719032307457<>ScoreDetail__18380|BZW1|0.000784719032307457__11866|TMEFF1|0.000674666972898484__ 0 0 0 0 0 140457 16104843 184991 1860 18380 BZW1 ORF Orf 38 0.3 Orf virus strain NZ-7 56 VEGF-E NZ-10 (VEGF VEGF from Orf virus strain NZ-10 57 VEGF-E D1701 (VEGF VEGF from Orf 2 JUMiner_v2.2 1 2 orf 0 2 18380 TotalCon:2<>18380|BZW1|9689|Complete__11866|TMEFF1|8577|Complete__<>AvaiableGeneRif=2<>BEST:18380|BZW1|0.000784719032307457<>ScoreDetail__18380|BZW1|0.000784719032307457__11866|TMEFF1|0.000674666972898484__ 0 0 0 0 0 140459 16104843 184991 1860 18380 BZW1 ORF Orf 49 0.3 Orf virus strain NZ-10 57 VEGF-E D1701 (VEGF VEGF from Orf virus strain D1701 58 and VEGF-E VR634 (VEGF VEGF from 2 JUMiner_v2.2 1 2 orf 0 2 18380 TotalCon:2<>18380|BZW1|9689|Complete__11866|TMEFF1|8577|Complete__<>AvaiableGeneRif=2<>BEST:18380|BZW1|0.000784719032307457<>ScoreDetail__18380|BZW1|0.000784719032307457__11866|TMEFF1|0.000674666972898484__ 0 0 0 0 0 140467 16104843 184996 11376 6416 KRT14 K14 K14-driven 0 0.0 K14-driven VEGF-E NZ-7 transgenic mice have shown a significant increase in 11 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 140647 16104843 185086 21242 11283 SRC SRC Src 7 0.0 An analysis of mice deficient in specific Src family kinases has demonstrated no decrease in VEGF-dependent neovascularization but 2 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 140648 16104843 185086 21242 11283 SRC SRC Src 25 0.0 VEGF-dependent neovascularization but a complete ablation of vascular permeability in Src or Yes mice whereas Fyn mice show no such defect 2 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 140649 16104843 185086 24357 12841 YES1 Yes Yes 27 0.0 but a complete ablation of vascular permeability in Src or Yes mice whereas Fyn mice show no such defect 119 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 140652 16104843 185087 21242 11283 SRC SRC Src 4 0.0 In addition blockade of Src prevents the disassociation of a complex comprising VEGFR-2 VE-cadherin and 2 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 140656 16104843 185088 21242 11283 SRC SRC Src 8 0.0 These findings indicate that the activity of specific Src family kinases is essential for the VEGF-induced enhancement of vascular 2 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 140665 16104843 185092 13812 32159 MTG1 GTP GTP-binding 2 0.5 The small GTP-binding protein Rac which is also activated by PI3K has been 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 140695 16104843 185108 21242 11283 SRC SRC Src 16 0.0 a VE-cadherin/ VE-cadherin b -catenin complex via the activation of Src and facilitates tumour cell extravasation and metastasis 136 2 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 140728 16104843 185137 21242 11283 SRC SRC Src 9 0.0 Paul et al 156 have reported that Src mice are resistant to VEGF-A-induced vascular permeability and show decreased 2 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 140730 16104843 185138 21242 11283 SRC SRC Src 4 0.0 Systemic application of a Src inhibitor suppresses vascular permeability protecting wild-type mice from ischaemia-induced brain 2 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 140740 16104843 185146 651 460 AMDP1 AMD AMD 19 0.0 significant and clinically meaningful benefit in the treatment of neovascular AMD (age-related age-related macular degeneration 160 which is the leading cause 1 JUMiner_v2.2 1 0 0 1 0 TotalCon:2<>460|AMDP1|263|No_GeneRif__457|AMD1|262|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 140743 16104843 185147 20996 11179 SOD1 ALS ALS 34 1.0 cord and causes adult-onset progressive motor neuron degeneration reminiscent of ALS (amyotrophic amyotrophic lateral sclerosis 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00117767640411015<>ScoreDetail__5468|IGFALS|0.000820142704830641__11179|SOD1|0.00117767640411015__ 0 0 0 0 0 140748 16104843 185149 20996 11179 SOD1 ALS ALS 17 1.0 is a modifier associated with motor neuron degeneration in human ALS and in a mouse model of ALS 162 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00117767640411015<>ScoreDetail__5468|IGFALS|0.000820142704830641__11179|SOD1|0.00117767640411015__ 0 0 0 0 0 140749 16104843 185149 20996 11179 SOD1 ALS ALS 24 1.0 degeneration in human ALS and in a mouse model of ALS 162 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00117767640411015<>ScoreDetail__5468|IGFALS|0.000820142704830641__11179|SOD1|0.00117767640411015__ 0 0 0 0 0 140751 16104843 185150 20996 11179 SOD1 ALS ALS 7 1.0 VEGF-A treatment increases the life expectancy of ALS mice without causing toxic side effects 163 164 indicating that 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00117767640411015<>ScoreDetail__5468|IGFALS|0.000820142704830641__11179|SOD1|0.00117767640411015__ 0 0 0 0 0 140754 16104843 185150 20996 11179 SOD1 ALS ALS 41 1.0 VEGF-A could be one of the most effective therapies for ALS reported so far 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00117767640411015<>ScoreDetail__5468|IGFALS|0.000820142704830641__11179|SOD1|0.00117767640411015__ 0 0 0 0 0 140761 16104843 185154 4986 2412 CRYGEP1 CCL CCl 7 0.0 A VEGFR-1 agonist protected the liver from CCl 4 -induced damage in spite of its inability to induce 14 JUMiner_v2.2 1 0 0 1 0 TotalCon:2<>2412|CRYGEP1|200575|No_GeneRif__2410|CRYGC|1420|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 140780 16104843 185170 20996 11179 SOD1 ALS ALS 1 1.0 Abbreviations ALS amyotrophic lateral sclerosis DSCR1 Down syndrome critical region protein 1 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00117767640411015<>ScoreDetail__5468|IGFALS|0.000820142704830641__11179|SOD1|0.00117767640411015__ 0 0 0 0 0 140782 16104843 185170 13346 7178 MMRN1 ECM ECM 12 0.3 amyotrophic lateral sclerosis DSCR1 Down syndrome critical region protein 1 ECM extracellular matrix ERK extracellular signal-regulated kinase FAK focal adhesion kinase 3 JUMiner_v2.2 1 2 extracellular matrix 0 0 0 0 0 0 0 0 140799 16104843 185170 20149 10919 SLC14A2 UTR UTR 120 0.3 kinase Tag T antigen T H 2 T-helper type 2 UTR untranslated region VEGF vascular endothelial growth factor VEGFR VEGF receptor 11 JUMiner_v2.2 1 2 untranslated region 0 2 4468 TotalCon:2<>10919|SLC14A2|8170|Complete__4468|UTS2R|2837|Complete__<>AvaiableGeneRif=2<>BEST:4468|UTS2R|0.000718341656974755<>ScoreDetail__10919|SLC14A2|0.000381768999132343__4468|UTS2R|0.000718341656974755__ 0 0 0 0 0 140824 16104843 185179 20996 11179 SOD1 ALS ALS 15 1.0 effect on hypoxic motor neurons and is a modifier of ALS (amyotrophic amyotrophic lateral sclerosis 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00117767640411015<>ScoreDetail__5468|IGFALS|0.000820142704830641__11179|SOD1|0.00117767640411015__ 0 0 0 0 0 142213 16120782 186870 20996 11179 SOD1 ALS ALS 3 1.9 Amyotrophic lateral sclerosis (ALS) ALS represents a fatal neurodegenerative disorder characterized by progressive death of 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00102919223206476<>ScoreDetail__5468|IGFALS|0.000491297024143739__11179|SOD1|0.00102919223206476__ 0 0 0 0 0 142216 16120782 186872 20996 11179 SOD1 ALS ALS 25 1.9 dismutase (SOD1)-G93A SOD1 -G93A transgenic mice a mouse model of ALS benefit from oral treatment with the PPAR gamma agonist pioglitazone 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00102919223206476<>ScoreDetail__5468|IGFALS|0.000491297024143739__11179|SOD1|0.00102919223206476__ 0 0 0 0 0 142224 16120782 186881 20996 11179 SOD1 ALS ALS 13 1.9 as Alzheimer's disease (AD) AD and amyotrophic lateral sclerosis (ALS), ALS are accompanied by an inflammatory component it has been hypothesized 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00102919223206476<>ScoreDetail__5468|IGFALS|0.000491297024143739__11179|SOD1|0.00102919223206476__ 0 0 0 0 0 142225 16120782 186882 20996 11179 SOD1 ALS ALS 19 1.9 developed and tested in animal models and clinical trials of ALS and AD (Lim Lim et al. 2000 In t'Veld et 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00102919223206476<>ScoreDetail__5468|IGFALS|0.000491297024143739__11179|SOD1|0.00102919223206476__ 0 0 0 0 0 142226 16120782 186882 16343 17468 PDLIM5 LIM Lim 22 0.8 animal models and clinical trials of ALS and AD (Lim Lim et al. 2000 In t'Veld et al. 2001 Drachman et 2 JUMiner_v2.2 1 2 34 0 0 0 0 0 0 0 0 142227 16120782 186883 20996 11179 SOD1 ALS ALS 5 1.9 The primary pathological feature of ALS is the loss of motor neurons (Talbot, Talbot 2002 which 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00102919223206476<>ScoreDetail__5468|IGFALS|0.000491297024143739__11179|SOD1|0.00102919223206476__ 0 0 0 0 0 142231 16120782 186884 20996 11179 SOD1 ALS ALS 32 1.9 superoxide dismutase (SOD1), SOD1 which have been linked to inherited ALS (Gurney Gurney et al. 1994 Hensley et al. 2002 Yoshihara 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00102919223206476<>ScoreDetail__5468|IGFALS|0.000491297024143739__11179|SOD1|0.00102919223206476__ 0 0 0 0 0 142237 16120782 186887 20996 11179 SOD1 ALS ALS 35 1.9 reduce neuroinflammation protect from motor neuron loss and improve clinical ALS symptoms 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00102919223206476<>ScoreDetail__5468|IGFALS|0.000491297024143739__11179|SOD1|0.00102919223206476__ 0 0 0 0 0 142242 16120782 186918 19305 10489 S100A12 CGRP CGRP 8 1.3 Sections were then stained for calcitonin gene-related peptide (CGRP) CGRP immunoreactivity essentially as described in detail previously (Schutz Schutz et 1 JUMiner_v2.2 1 2 calcitonin gene-related peptide 0 2 10489 TotalCon:2<>10489|S100A12|6283|Complete__1437|CALCA|796|Complete__<>AvaiableGeneRif=2<>BEST:10489|S100A12|0.000449019781345252<>ScoreDetail__1437|CALCA|0.000385381921135833__10489|S100A12|0.000449019781345252__ 0 0 0 0 0 142243 16120782 186919 19305 10489 S100A12 CGRP CGRP-positive 6 1.3 For the quantification of motor neurons CGRP-positive cell bodies were counted on six sections per animal and 1 JUMiner_v2.2 1 2 calcitonin gene-related peptide 0 2 10489 TotalCon:2<>10489|S100A12|6283|Complete__1437|CALCA|796|Complete__<>AvaiableGeneRif=2<>BEST:10489|S100A12|0.000449019781345252<>ScoreDetail__1437|CALCA|0.000385381921135833__10489|S100A12|0.000449019781345252__ 0 0 0 0 0 142246 16120782 186933 19254 10472 RUNX2 CCD CCD 26 0.3 a Nikon (D_amp_uuml;sseldorf, D_amp_uuml sseldorf Germany H800 microscope with a CCD camera (DXP-9100P DXP-9100P 3CCD color video Sony Tokyo Japan and 1 JUMiner_v2.2 1 2 ccd camera 0 0 0 0 0 0 0 0 142247 16120782 186933 16343 17468 PDLIM5 LIM LIM 40 0.8 video Sony Tokyo Japan and using Lucia imaging software (LIM LIM Laboratory Imaging distributed by Nikon 1 JUMiner_v2.2 1 2 lim et al 0 0 0 0 0 0 0 0 142248 16120782 186936 19573 10691 SDS SDS SDS 23 0.0 radioimmunoprecipitation assay buffer (1% 1% Triton 1% sodium deoxycholate 0.1% SDS 150 m M NaCl 50 m M Tris-HCl pH 7.2 1 JUMiner_v2.2 1 0 0 2 19440 TotalCon:2<>10691|SDS|10993|Complete__19440|SBDS|51119|Complete__<>AvaiableGeneRif=2<>BEST:19440|SBDS|0.000302519680639415<>ScoreDetail__10691|SDS|6.84041316095492e-05__19440|SBDS|0.000302519680639415__ 0 0 0 0 0 142255 16120782 186937 19573 10691 SDS SDS SDS 16 0.0 COX-2 100 microg of protein samples was separated in 10% SDS gels transferred onto Immobilon-P polyvinylidene difluoride membranes and stained with 1 JUMiner_v2.2 1 0 0 2 19440 TotalCon:2<>10691|SDS|10993|Complete__19440|SBDS|51119|Complete__<>AvaiableGeneRif=2<>BEST:19440|SBDS|0.000302519680639415<>ScoreDetail__10691|SDS|6.84041316095492e-05__19440|SBDS|0.000302519680639415__ 0 0 0 0 0 142263 16120782 186939 19573 10691 SDS SDS SDS 17 0.0 SOD1 2 microg of protein samples was separated in 15% SDS gels transferred onto nitrocellulose membranes and stained with a rabbit 1 JUMiner_v2.2 1 0 0 2 19440 TotalCon:2<>10691|SDS|10993|Complete__19440|SBDS|51119|Complete__<>AvaiableGeneRif=2<>BEST:19440|SBDS|0.000302519680639415<>ScoreDetail__10691|SDS|6.84041316095492e-05__19440|SBDS|0.000302519680639415__ 0 0 0 0 0 142275 16120782 186948 16033 8600 PANX2 PX2 PX2 30 0.0 s and extension at 72degreeC for 45 s using a PX2 thermocycler (ThermoHybaid, ThermoHybaid Ulm Germany 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 142285 16120782 186978 20996 11179 SOD1 ALS ALS 12 1.9 COX-2 and iNOS were described in several neurodegenerative disorders including ALS as well as in the SOD1-G93A model used in this 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00102919223206476<>ScoreDetail__5468|IGFALS|0.000491297024143739__11179|SOD1|0.00102919223206476__ 0 0 0 0 0 142294 16120782 186983 20996 11179 SOD1 ALS ALS 0 1.9 ALS is a fatal neurodegenerative disease without curative treatment options to 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00102919223206476<>ScoreDetail__5468|IGFALS|0.000491297024143739__11179|SOD1|0.00102919223206476__ 0 0 0 0 0 142295 16120782 186985 20996 11179 SOD1 ALS ALS 13 1.9 including excitotoxic apoptotic and metabolic mechanisms have been implied in ALS pathogenesis and proposed as therapeutic targets (Talbot, Talbot 2002 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00102919223206476<>ScoreDetail__5468|IGFALS|0.000491297024143739__11179|SOD1|0.00102919223206476__ 0 0 0 0 0 142297 16120782 186988 20996 11179 SOD1 ALS ALS 35 1.9 radicals may significantly contribute to the development and progression of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00102919223206476<>ScoreDetail__5468|IGFALS|0.000491297024143739__11179|SOD1|0.00102919223206476__ 0 0 0 0 0 142301 16120782 186990 20996 11179 SOD1 ALS ALS 16 1.9 suppression of inflammation may offer a new therapeutic avenue in ALS treatment as supported by previous findings in animal models of 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00102919223206476<>ScoreDetail__5468|IGFALS|0.000491297024143739__11179|SOD1|0.00102919223206476__ 0 0 0 0 0 142307 16120782 187002 19305 10489 S100A12 CGRP CGRP-positive 14 1.3 treatment on motor neuron degeneration and muscle fiber morphology a CGRP-positive motor neuron numbers in the lumbar spinal cord ( n 1 JUMiner_v2.2 1 2 calcitonin gene-related peptide 0 2 10489 TotalCon:2<>10489|S100A12|6283|Complete__1437|CALCA|796|Complete__<>AvaiableGeneRif=2<>BEST:10489|S100A12|0.000449019781345252<>ScoreDetail__1437|CALCA|0.000385381921135833__10489|S100A12|0.000449019781345252__ 0 0 0 0 0 142311 16120782 187003 19305 10489 S100A12 CGRP CGRP 4 1.3 Error bars represent SEM (CGRP CGRP cells or SD (median median fiber diameter b Evaluation of 1 JUMiner_v2.2 1 2 32 0 2 10489 TotalCon:2<>10489|S100A12|6283|Complete__1437|CALCA|796|Complete__<>AvaiableGeneRif=2<>BEST:10489|S100A12|0.000449019781345252<>ScoreDetail__1437|CALCA|0.000385381921135833__10489|S100A12|0.000449019781345252__ 0 0 0 0 0 142312 16120782 187003 19305 10489 S100A12 CGRP CGRP 22 1.3 b Evaluation of the spinal cord motor neuron area by CGRP immunohistochemistry and muscle fiber morphology by histological HE stain 1 JUMiner_v2.2 1 2 calcitonin gene-related peptide 0 2 10489 TotalCon:2<>10489|S100A12|6283|Complete__1437|CALCA|796|Complete__<>AvaiableGeneRif=2<>BEST:10489|S100A12|0.000449019781345252<>ScoreDetail__1437|CALCA|0.000385381921135833__10489|S100A12|0.000449019781345252__ 0 0 0 0 0 142314 16120782 187005 19305 10489 S100A12 CGRP CGRP 20 1.3 inflammation markers a Immunofluorescence colabeling of CD11b (green) green and CGRP (red) red in the spinal cord motor neuron area at 1 JUMiner_v2.2 1 2 calcitonin gene-related peptide 0 2 10489 TotalCon:2<>10489|S100A12|6283|Complete__1437|CALCA|796|Complete__<>AvaiableGeneRif=2<>BEST:10489|S100A12|0.000449019781345252<>ScoreDetail__1437|CALCA|0.000385381921135833__10489|S100A12|0.000449019781345252__ 0 0 0 0 0 142364 16120782 187034 20996 11179 SOD1 ALS ALS 4 1.9 Antiinflammatory treatment strategies in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00102919223206476<>ScoreDetail__5468|IGFALS|0.000491297024143739__11179|SOD1|0.00102919223206476__ 0 0 0 0 0 142365 16120782 187035 20996 11179 SOD1 ALS ALS 22 1.9 significantly contributes to the progression of motor neuron death in ALS has been supported by studies on SOD1 transgenic mice reporting 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00102919223206476<>ScoreDetail__5468|IGFALS|0.000491297024143739__11179|SOD1|0.00102919223206476__ 0 0 0 0 0 142367 16120782 187038 20996 11179 SOD1 ALS ALS 29 1.9 not allow us to conclude that patients suffering from sporadic ALS will benefit from PPAR gamma-agonist treatment if initiated after clinical 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00102919223206476<>ScoreDetail__5468|IGFALS|0.000491297024143739__11179|SOD1|0.00102919223206476__ 0 0 0 0 0 142369 16120782 187039 20996 11179 SOD1 ALS ALS 10 1.9 However it seems possible that in the case of familiar ALS family members with an inherited ALS risk which can be 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00102919223206476<>ScoreDetail__5468|IGFALS|0.000491297024143739__11179|SOD1|0.00102919223206476__ 0 0 0 0 0 142370 16120782 187039 20996 11179 SOD1 ALS ALS 16 1.9 the case of familiar ALS family members with an inherited ALS risk which can be diagnosed before the appearance of clinical 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00102919223206476<>ScoreDetail__5468|IGFALS|0.000491297024143739__11179|SOD1|0.00102919223206476__ 0 0 0 0 0 142372 16120782 187040 20996 11179 SOD1 ALS ALS 29 1.9 they would be available readily for clinical trials in human ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00102919223206476<>ScoreDetail__5468|IGFALS|0.000491297024143739__11179|SOD1|0.00102919223206476__ 0 0 0 0 0 142373 16120782 187045 19305 10489 S100A12 CGRP CGRP 26 1.3 Nyberg (Uppsala, Uppsala Sweden for the generous gift of the CGRP antibody and Dr Albrecht Clement (Mainz, Mainz Germany for donating 1 JUMiner_v2.2 1 2 calcitonin gene-related peptide 0 2 10489 TotalCon:2<>10489|S100A12|6283|Complete__1437|CALCA|796|Complete__<>AvaiableGeneRif=2<>BEST:10489|S100A12|0.000449019781345252<>ScoreDetail__1437|CALCA|0.000385381921135833__10489|S100A12|0.000449019781345252__ 0 0 0 0 0 142375 16120782 187045 10290 5825 IGKV3D-20 A11 A11 0 0.0 (SFB400/A11), SFB400 A11 and by Grant DA016768 from the National Institutes of Health 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 131177 16179515 172934 20996 11179 SOD1 ALS ALS 24 1.7 SOD1 mouse an animal model of amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00139723958710624<>ScoreDetail__5468|IGFALS|0.000612915807655876__11179|SOD1|0.00139723958710624__ 0 0 0 0 0 131182 16179515 172942 5200 10672 CXCL12 SDF1 SDF-1 21 0.0 mutation glial fibrillary acidic protein (GFAP), GFAP stroma-derived factor-1 (SDF-1), SDF-1 and excitatory amino acid transporter-2 (EAAT2) EAAT2 11 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 132373 16197805 174843 20996 11179 SOD1 ALS ALS 12 0.0 briefly summarize their possible roles in amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000974177821936674<>ScoreDetail__5468|IGFALS|0.000368030423848371__11179|SOD1|0.000974177821936674__ 0 0 0 0 0 126503 16326025 166566 9947 5468 IGFALS ALS ALS 12 0.3 of SSTT in therapeutic strategies against amyotrophic lateral sclerosis (ALS) ALS or early-stage Alzheimer_amp_#x2019 s disease may offer a reasonable first 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000554703949134244<>ScoreDetail__5468|IGFALS|0.000339500933627567__11179|SOD1|0.000554703949134244__ 0 0 0 0 0 126504 16326025 166567 9947 5468 IGFALS ALS ALS 10 0.3 In view of the known rapid progressive neurodegeneration associated with ALS minute variations in core body temperature may in fact demonstrate 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000554703949134244<>ScoreDetail__5468|IGFALS|0.000339500933627567__11179|SOD1|0.000554703949134244__ 0 0 0 0 0 128657 16380619 169458 11629 6493 LAMC2 CSF CSF 13 0.0 compared IL-6 and tumor necrosis factor alpha TNF-alpha levels in CSF and sera from 10 hypoxemics and 10 normoxemics patients with 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 128664 16380619 169463 11629 6493 LAMC2 CSF CSF 12 0.0 excessive production of tumor necrosis factor alpha TNF-alpha with lower CSF levels of interleukin (IL)-6 IL -6 was demonstrated in a 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 128672 16380619 169466 11629 6493 LAMC2 CSF CSF 34 0.0 controls or elevated levels of IL-6 and IL-1_amp_#223 in the CSF spinal cords and sera of patients with ALS 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 128677 16380619 169469 11629 6493 LAMC2 CSF CSF 27 0.0 cytokines by studying TNF-alpha and IL-6 in the sera and CSF of hypoxemic and normoxemic patients with ALS and neurologic controls 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 128679 16380619 169470 11629 6493 LAMC2 CSF CSF 2 0.0 Plasma and CSF from patients with ALS and control subjects were obtained with 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 128680 16380619 169475 11629 6493 LAMC2 CSF CSF 2 0.0 Sera and CSF samples were stored in a refrigerator at -80degreeC 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 128683 16380619 169476 11629 6493 LAMC2 CSF CSF 6 0.0 IL-6 and TNF-alpha levels in CSF and sera were determined using a chemiluminescent assay (QuantiGlo, QuantiGlo 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 128687 16380619 169477 11629 6493 LAMC2 CSF CSF 7 0.1 We found higher levels of IL-6 in CSF ( z = -2.7 p = 0.02 in serum ( 6 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 128692 16380619 169478 16035 20837 PAOX PAO Pao 4 0.0 A correlation exists between Pao 2 and levels of CSF IL-6 ( p = 0.0001 2 JUMiner_v2.2 1 0 0 2 15862 TotalCon:2<>20837|PAOX|196743|Complete__15862|SMOX|54498|Complete__<>AvaiableGeneRif=2<>BEST:15862|SMOX|0.000474608448030375<>ScoreDetail__20837|PAOX|0.000447227191413238__15862|SMOX|0.000474608448030375__ 0 0 0 0 0 128693 16380619 169478 11629 6493 LAMC2 CSF CSF 9 0.2 A correlation exists between Pao 2 and levels of CSF IL-6 ( p = 0.0001 r = -0.7 serum IL-6 5 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 128696 16380619 169479 11629 6493 LAMC2 CSF CSF 10 0.1 In neurologic controls we found higher levels of IL-6 in CSF ( z = -2.8 p = 0.02 in serum ( 6 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 128700 16380619 169480 16035 20837 PAOX PAO Pao 4 0.0 There were correlations between Pao 2 and CSF IL-6 ( p = 0.01 r = 2 JUMiner_v2.2 1 0 0 2 15862 TotalCon:2<>20837|PAOX|196743|Complete__15862|SMOX|54498|Complete__<>AvaiableGeneRif=2<>BEST:15862|SMOX|0.000474608448030375<>ScoreDetail__20837|PAOX|0.000447227191413238__15862|SMOX|0.000474608448030375__ 0 0 0 0 0 128701 16380619 169480 11629 6493 LAMC2 CSF CSF 7 0.2 There were correlations between Pao 2 and CSF IL-6 ( p = 0.01 r = 0.5 serum IL-6 5 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 128703 16380619 169481 11629 6493 LAMC2 CSF CSF 5 0.0 TNF-alpha was undetectable in CSF 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 128706 16380619 169482 11629 6493 LAMC2 CSF CSF 15 0.0 between IL-6 or TNF-alpha levels in plasma and those in CSF 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 128713 16380619 169484 11629 6493 LAMC2 CSF CSF 8 0.0 We found an increase in IL-6 levels in CSF and sera and TNF-alpha in sera in hypoxemic patients with 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 128747 16380619 169505 11629 6493 LAMC2 CSF CSF 0 0.0 CSF and sera interleukin-6 levels and tumor necrosis factor alpha sera 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 128748 16380619 169505 16035 20837 PAOX PAO Pao 24 0.0 ALS according to the condition of hypoxemia or normoxemia (Pao Pao 2 *Significant difference (p p _lt_ 0.05 between the hypoxemic 2 JUMiner_v2.2 1 0 0 2 15862 TotalCon:2<>20837|PAOX|196743|Complete__15862|SMOX|54498|Complete__<>AvaiableGeneRif=2<>BEST:15862|SMOX|0.000474608448030375<>ScoreDetail__20837|PAOX|0.000447227191413238__15862|SMOX|0.000474608448030375__ 0 0 0 0 0 128749 16380619 169507 11629 6493 LAMC2 CSF CSF 0 0.0 CSF and sera interleukin-6 levels and tumor necrosis factor alpha sera 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 128750 16380619 169507 16035 20837 PAOX PAO Pao 23 0.0 controls according to the condition of hypoxemia or normoxemia (Pao Pao 2 *Significant difference (p p _lt_ 0.05 between the hypoxemic 2 JUMiner_v2.2 1 0 0 2 15862 TotalCon:2<>20837|PAOX|196743|Complete__15862|SMOX|54498|Complete__<>AvaiableGeneRif=2<>BEST:15862|SMOX|0.000474608448030375<>ScoreDetail__20837|PAOX|0.000447227191413238__15862|SMOX|0.000474608448030375__ 0 0 0 0 0 128751 16380619 169510 16035 20837 PAOX PAO Pao 14 0.0 to be hypoxemic if their oxygen arterial blood pressure (Pao Pao 2 was below the age-dependent minimal reference value each time 2 JUMiner_v2.2 1 0 0 2 15862 TotalCon:2<>20837|PAOX|196743|Complete__15862|SMOX|54498|Complete__<>AvaiableGeneRif=2<>BEST:15862|SMOX|0.000474608448030375<>ScoreDetail__20837|PAOX|0.000447227191413238__15862|SMOX|0.000474608448030375__ 0 0 0 0 0 128753 16380619 169515 20006 10902 SLA SLA SLA 11 0.2 by grants from the Association pour la Recherche sur la SLA (ARS) ARS 5 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>10902|SLA|6503|Complete__30605|SEPSECS|51091|No_GeneRif__<>AvaiableGeneRif=1<> 1 1 0 0 0 118012 16425674 153703 20996 11179 SOD1 ALS ALS 28 0.9 as a potential subcutaneous treatment for amyotrophic lateral sclerosis (ALS), ALS stroke spinal cord injury lung inflammation and mucositis 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000793984273108762<>ScoreDetail__5468|IGFALS|0.000310607237148626__11179|SOD1|0.000793984273108762__ 0 0 0 0 0 118013 16425674 153704 20996 11179 SOD1 ALS ALS 11 0.9 compound is currently undergoing a phase I clinical trial for ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000793984273108762<>ScoreDetail__5468|IGFALS|0.000310607237148626__11179|SOD1|0.000793984273108762__ 0 0 0 0 0 118580 16436205 154682 20996 11179 SOD1 ALS ALS 19 1.4 dismutase (G93A-SOD1) G93A-SOD1 associated with familial amyotrophic lateral sclerosis (ALS) ALS demonstrate age-dependent neuroinflammation associated with broad-spectrum cytokine eicosanoid and oxidant 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00115672406106539<>ScoreDetail__5468|IGFALS|0.000514378092392103__11179|SOD1|0.00115672406106539__ 0 0 0 0 0 118584 16436205 154686 18741 10289 RPA1 RPA RPAs 20 0.0 G93A-SOD1 cells as assessed by multiprobe ribonuclease protection assays (RPAs) RPAs for their mRNA transcripts 13 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 118585 16436205 154688 20996 11179 SOD1 ALS ALS 10 1.4 These findings support a role for active glial involvement in ALS and may provide a useful cell culture tool for the 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00115672406106539<>ScoreDetail__5468|IGFALS|0.000514378092392103__11179|SOD1|0.00115672406106539__ 0 0 0 0 0 118586 16436205 154690 20996 11179 SOD1 ALS ALS 10 1.4 the proximal cause of paralysis in amyotrophic lateral sclerosis (ALS) ALS is the death of motor neurons it is becoming widely 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00115672406106539<>ScoreDetail__5468|IGFALS|0.000514378092392103__11179|SOD1|0.00115672406106539__ 0 0 0 0 0 118587 16436205 154690 20996 11179 SOD1 ALS ALS 27 1.4 it is becoming widely accepted that motor neuron death in ALS is not cell autonomous but depends upon active and passive 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00115672406106539<>ScoreDetail__5468|IGFALS|0.000514378092392103__11179|SOD1|0.00115672406106539__ 0 0 0 0 0 118588 16436205 154691 20996 11179 SOD1 ALS ALS 4 1.4 The neuron-cell autonomy of ALS pathogenesis has been strongly questioned by a number of studies 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00115672406106539<>ScoreDetail__5468|IGFALS|0.000514378092392103__11179|SOD1|0.00115672406106539__ 0 0 0 0 0 118596 16436205 154698 20996 11179 SOD1 ALS ALS 10 1.4 These studies provide strong incentive to consider glial involvement in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00115672406106539<>ScoreDetail__5468|IGFALS|0.000514378092392103__11179|SOD1|0.00115672406106539__ 0 0 0 0 0 118597 16436205 154700 20996 11179 SOD1 ALS ALS 7 1.4 Using the G93A-SOD1 mutant mouse model for ALS Gurney et al reported dramatically increased numbers of MHC-II microglia 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00115672406106539<>ScoreDetail__5468|IGFALS|0.000514378092392103__11179|SOD1|0.00115672406106539__ 0 0 0 0 0 118598 16436205 154702 20996 11179 SOD1 ALS ALS-linked 38 1.4 the application of this cytokine in cell culture studies of ALS-linked glial activation 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00115672406106539<>ScoreDetail__5468|IGFALS|0.000514378092392103__11179|SOD1|0.00115672406106539__ 0 0 0 0 0 118599 16436205 154705 20996 11179 SOD1 ALS ALS 23 1.4 antagonist nordihydroguaiaretic acid (NDGA) NDGA slows disease progression in the ALS mouse 14 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00115672406106539<>ScoreDetail__5468|IGFALS|0.000514378092392103__11179|SOD1|0.00115672406106539__ 0 0 0 0 0 118600 16436205 154706 20996 11179 SOD1 ALS ALS 16 1.4 neuroinflammatory response antagonism of which may slow the progression of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00115672406106539<>ScoreDetail__5468|IGFALS|0.000514378092392103__11179|SOD1|0.00115672406106539__ 0 0 0 0 0 118601 16436205 154707 20996 11179 SOD1 ALS ALS 13 1.4 better understand the contributions of astroglia to neuroinflammation in the ALS context and to create a tool for the study of 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00115672406106539<>ScoreDetail__5468|IGFALS|0.000514378092392103__11179|SOD1|0.00115672406106539__ 0 0 0 0 0 118608 16436205 154723 6895 3530 F12 F12 F12 17 0.0 of 50% Dulbecco's Modified Essential Medium (DMEM) DMEM and 50% F12 media containing 10% heat-inactivated fetal bovine serum 1% glutamine and 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 118610 16436205 154742 18741 10289 RPA1 RPA RPAs 10 0.0 and methods Ribonuclease protection assays Multiprobe ribonuclease protection assays (RPAs) RPAs were performed as described 14 7 8 13 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 118611 16436205 154745 18741 10289 RPA1 RPA RPA 7 0.0 Panels of mRNA were detected using commercial RPA kits (Riboquant_amp_#x02122;, Riboquant_amp_#x02122 Pharmingen San Diego CA 13 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 118614 16436205 154763 12519 6983 ME1 MES MES 7 0.0 were lysed in 20 mM 2-(N-morpholino)-ethanesulfonate 2- N-morpholino -ethanesulfonate (MES) MES buffer pH 5.5 containing 0.1% triton X-100 5 mM biotin-LC-hydrazide 1 JUMiner_v2.2 1 0 0 2 7121 TotalCon:2<>6983|ME1|4199|Complete__7121|MKS1|54903|Complete__<>AvaiableGeneRif=2<>BEST:7121|MKS1|0.000281213582841022<>ScoreDetail__7121|MKS1|0.000281213582841022__6983|ME1|0.000245218244237371__ 0 0 0 0 0 118615 16436205 154770 18741 10289 RPA1 RPA RPAs 66 0.0 immunoblot (not not shown or cytokine expression patterns assessed by RPAs (data data not shown 13 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 118617 16436205 154778 18741 10289 RPA1 RPA RPA 10 0.0 Results Specific cytokine expressioin differences occur in G93A-SOD1 astrocytes Multiprobe RPA methods were used to assess genotype-dependent differences in cytokine-stimulated cytokine 13 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 118635 16436205 154826 20996 11179 SOD1 ALS ALS 4 1.4 In murine models of ALS neuroinflammation is robust as indicated by broad-spectrum cytokine upregulation plus 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00115672406106539<>ScoreDetail__5468|IGFALS|0.000514378092392103__11179|SOD1|0.00115672406106539__ 0 0 0 0 0 118642 16436205 154837 20996 11179 SOD1 ALS ALS 9 1.4 One of the most important unaccomplished necessities in understanding ALS is to elucidate the toxic gain-of-function(s) gain-of-function s inherent to 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00115672406106539<>ScoreDetail__5468|IGFALS|0.000514378092392103__11179|SOD1|0.00115672406106539__ 0 0 0 0 0 122173 16510725 160989 20996 11179 SOD1 ALS ALS 20 1.4 pathogenesis of motor neuron death in amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122178 16510725 160991 20996 11179 SOD1 ALS ALS 14 1.4 TNF-alpha and FasL immunoreactivity in lumbar spinal cord sections of ALS patients and G93A transgenic mice 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122189 16510725 160997 20996 11179 SOD1 ALS ALS 14 1.4 lenalidomide bear promise as therapeutic interventions for the treatment of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122193 16510725 160999 20996 11179 SOD1 ALS ALS 3 1.4 Amyotrophic lateral sclerosis (ALS) ALS is a fatal disease characterized by an age-related progressive degeneration 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122194 16510725 160999 19891 29546 SH3YL1 Ray Ray-Chaudhuri 23 0.6 of both upper and lower motor neurons (Leigh Leigh and Ray-Chaudhuri 1994 11 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 122195 16510725 161000 20996 11179 SOD1 ALS ALS 3 1.4 Approximately 5-10% of ALS cases are familial and exhibit an autosomal-dominant pattern of inheritance 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122196 16510725 161001 20996 11179 SOD1 ALS ALS 7 1.4 A major discovery in the study of ALS was the finding of missense mutations in the enzyme copper-zinc 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122198 16510725 161001 20996 11179 SOD1 ALS ALS 28 1.4 dismutase (SOD1), SOD1 which is associated with 15-20% of familial ALS cases (Rosen Rosen et al. 1993 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122199 16510725 161003 20996 11179 SOD1 ALS ALS 8 1.4 Neuroinflammation is one of the pathological hallmarks in ALS transgenic mice (West West et al. 1991 Almer et al. 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122205 16510725 161004 20996 11179 SOD1 ALS ALS 107 1.4 soluble TNF receptor are elevated in serum of humans with ALS (Poloni Poloni et al. 2000 alpha is capable of activating 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122217 16510725 161007 20996 11179 SOD1 ALS ALS 21 1.4 FasL are elevated in both human and mouse models of ALS and play a role in the pathogenesis of ALS we 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122218 16510725 161007 20996 11179 SOD1 ALS ALS 30 1.4 of ALS and play a role in the pathogenesis of ALS we tested the neuroprotective effects of thalidomide and lenalidomide two 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122221 16510725 161009 20996 11179 SOD1 ALS ALS 4 1.4 G93A SOD1 transgenic familial ALS mice (high high copy number (Gurney Gurney et al. 1994 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122237 16510725 161065 20996 11179 SOD1 ALS ALS 5 1.4 Paraffin-embedded spinal cord tissues from ALS patients ( n = 6 four males and two females 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122238 16510725 161066 20996 11179 SOD1 ALS ALS 3 1.4 One of the ALS patients had an I113T mutation of the SOD1 gene 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122240 16510725 161068 20996 11179 SOD1 ALS ALS 11 1.4 age at death was 59 years (range, range 27-69 for ALS patients and 65 years (range, range 54-73 for controls 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122243 16510725 161073 18741 10289 RPA1 RPA RPA 4 0.0 Commercial ribonuclease protection assay (RPA) RPA probe sets (PharMingen, PharMingen San Diego CA were used to 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 122247 16510725 161082 20996 11179 SOD1 ALS ALS 11 1.4 TNF-alpha and FasL immunoreactivity in G93A SOD1 mouse model of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122255 16510725 161088 20996 11179 SOD1 ALS ALS 5 1.4 Pro-inflammatory cytokines are implicated in ALS pathogenesis 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122256 16510725 161089 20996 11179 SOD1 ALS ALS 6 1.4 Previous evidence for inflammatory mechanisms in ALS comes from a number of studies (Almer Almer et al. 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122257 16510725 161089 11629 6493 LAMC2 CSF CSF 22 0.3 (Almer Almer et al. 2001 beta are increased in the CSF and spinal cord respectively in ALS patients (Almer Almer et 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 122258 16510725 161089 20996 11179 SOD1 ALS ALS 28 1.4 are increased in the CSF and spinal cord respectively in ALS patients (Almer Almer et al. 1999 beta is also increased 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122259 16510725 161089 20996 11179 SOD1 ALS ALS 43 1.4 1999 beta is also increased in transgenic mouse models of ALS (Ghezzi Ghezzi et al. 1998 beta activation slowed disease progression 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122260 16510725 161089 20996 11179 SOD1 ALS ALS 59 1.4 activation slowed disease progression in a transgenic mouse model of ALS (Li Li et al. 2000 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122263 16510725 161091 20996 11179 SOD1 ALS ALS 6 1.4 Studies performed in mouse models of ALS and patients with ALS show increases in TNF-alpha. 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122264 16510725 161091 20996 11179 SOD1 ALS ALS 10 1.4 Studies performed in mouse models of ALS and patients with ALS show increases in TNF-alpha. 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122266 16510725 161092 20996 11179 SOD1 ALS ALS 1 1.4 In ALS patients antigenic TNF-alpha and its soluble receptors measured by ELISA 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122268 16510725 161092 20996 11179 SOD1 ALS ALS 17 1.4 its soluble receptors measured by ELISA were significantly higher in ALS patients than in healthy controls (Poloni Poloni et al. 2000 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122276 16510725 161092 18741 10289 RPA1 RPA RPAs 84 0.0 Elliott 2001 alpha receptors was also present A study using RPAs showed increased Fas-associated death domain (FADD) FADD and TNF-alpha receptor 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 122304 16510725 161105 20996 11179 SOD1 ALS ALS 12 1.4 provide additional evidence for a role of pro-inflammatory cytokines in ALS and suggest that TNF-alpha and FasL and related cytokines have 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122307 16510725 161105 20996 11179 SOD1 ALS ALS 31 1.4 related cytokines have important triggering roles in the pathogenesis of ALS in initiating a cell death pathway(s) pathway s 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122319 16510725 161109 20996 11179 SOD1 ALS ALS 18 1.4 and lenalidomide may have therapeutic value for treatment of human ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122323 16510725 161113 20996 11179 SOD1 ALS ALS 33 1.4 one or several pathways to cause motor neuron degeneration in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122328 16510725 161120 20996 11179 SOD1 ALS ALS 13 1.4 therefore have promise as therapeutic agents for the treatment of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122359 16510725 161139 20996 11179 SOD1 ALS ALS 7 1.4 TNF-alpha and FasL immunoreactivity in human ALS and controls 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122362 16510725 161140 20996 11179 SOD1 ALS ALS 20 1.4 the lumbar ventral horn of the spinal cord of human ALS and control patients 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122365 16510725 161141 20996 11179 SOD1 ALS ALS 16 1.4 neurons in the lumbar spinal cord sections of a familial ALS patient with SOD1 mutation (I113T) I113T and sporadic ALS patients 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122367 16510725 161141 20996 11179 SOD1 ALS ALS 24 1.4 familial ALS patient with SOD1 mutation (I113T) I113T and sporadic ALS patients 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122370 16510725 161142 20996 11179 SOD1 ALS ALS 11 1.4 Intense TNF-alpha and FasL immunoreactivity occurred predominantly in neurons of ALS patients 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122373 16510725 161143 20996 11179 SOD1 ALS ALS 15 1.4 FasL occurred in the same neurons in adjacent sections of ALS patients 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122389 16510725 161168 18741 10289 RPA1 RPA RPA 8 0.0 Spinal cord total RNA was used against a RPA multiprobe of cytokines a IL-1 alpha RNA was elevated in 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 122390 16510725 161168 22059 11766 TGFB1 TGFB1 TGF-beta1 124 0.0 elevated further in both lenalidomide- and thalidomide-treated G93A mice e TGF-beta1 RNA was not changed significantly in vehicle-treated G93A mice compared 11 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 122405 16510725 161177 20996 11179 SOD1 ALS ALS 7 1.4 TNF-alpha and FasL immunoreactivity in human ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122406 16510725 161178 20996 11179 SOD1 ALS ALS 6 1.4 Consistent with the immunohistochemical findings in ALS transgenic mice intense TNF-alpha and FasL immunoreactivity occurred in the 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122409 16510725 161178 20996 11179 SOD1 ALS ALS 24 1.4 immunoreactivity occurred in the lumbar spinal cord sections from an ALS patient with a SOD1 mutation (I113T) I113T as well as 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122411 16510725 161178 20996 11179 SOD1 ALS ALS 35 1.4 with a SOD1 mutation (I113T) I113T as well as sporadic ALS patients whereas control tissues showed very little or no TNF-alpha 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 122426 16510725 161202 18741 10289 RPA1 RPA RPAs 4 0.0 Cytokine levels by multiprobe RPAs 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 122427 16510725 161203 18741 10289 RPA1 RPA RPA 22 0.0 G93A mice at 110 d of age were subjected to RPA 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 122429 16510725 161204 18741 10289 RPA1 RPA RPA 0 0.0 RPA showed that both thalidomide and lenalidomide downregulated interleukin (IL)-12p40 IL 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 122430 16510725 161204 22059 11766 TGFB1 TGFB1 TGF-beta1 12 0.0 thalidomide and lenalidomide downregulated interleukin (IL)-12p40 IL -12p40 and upregulated TGF-beta1 and IL-1RA in treated G93A mice compared with vehicle-treated G93A 11 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 122439 16510725 161210 20996 11179 SOD1 ALS ALS 8 1.4 We thank Dr A Hays for providing human ALS spinal cord samples 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0011541420877148<>ScoreDetail__5468|IGFALS|0.000575879295699621__11179|SOD1|0.0011541420877148__ 0 0 0 0 0 109232 16533145 142006 20996 11179 SOD1 ALS ALS 4 1.9 Although amyotrophic lateral sclerosis (ALS) ALS was described more than 130 years ago the cause(s) cause 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00141825132207281<>ScoreDetail__5468|IGFALS|0.000434480361487661__11179|SOD1|0.00141825132207281__ 0 0 0 0 0 109233 16533145 142007 20996 11179 SOD1 ALS ALS 19 1.9 superoxide dismutase as a primary cause of some forms of ALS model systems have been developed that have helped us begin 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00141825132207281<>ScoreDetail__5468|IGFALS|0.000434480361487661__11179|SOD1|0.00141825132207281__ 0 0 0 0 0 113036 16624536 146803 20996 11179 SOD1 ALS ALS 3 1.7 Amyotrophic lateral sclerosis (ALS) ALS is a fatal neurodegenerative condition in which motor neurons are 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113037 16624536 146805 20996 11179 SOD1 ALS ALS 14 1.7 motor neuron loss is evident in presymptomatic mouse models of ALS and in human patients 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113038 16624536 146806 20996 11179 SOD1 ALS ALS 8 1.7 Efforts aimed at attenuating the inflammatory response in ALS animal models have delayed symptom onset and extended survival 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113039 16624536 146809 20996 11179 SOD1 ALS ALS 1 1.7 Because ALS is a syndromic disease in which glutamate excitotoxicity altered cytoskeletal 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113040 16624536 146824 20996 11179 SOD1 ALS ALS 3 1.7 Amyotrophic lateral sclerosis (ALS) ALS is a fatal neurodegenerative disease characterized by the selective loss 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113041 16624536 146828 20996 11179 SOD1 ALS ALS 6 1.7 While between 5 and 8% of ALS cases are familial (fALS), fALS of which 20% harbour missense 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113043 16624536 146828 20996 11179 SOD1 ALS ALS 29 1.7 zinc superoxide dismutase (SOD1) SOD1 gene 3 the majority of ALS cases are sporadic (sALS) sALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113044 16624536 146829 20996 11179 SOD1 ALS ALS 4 1.7 Although the etiology of ALS remains to be defined the contemporary understanding of ALS is 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113045 16624536 146829 20996 11179 SOD1 ALS ALS 13 1.7 of ALS remains to be defined the contemporary understanding of ALS is that it is likely syndromic as opposed to a 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113046 16624536 146830 20996 11179 SOD1 ALS ALS 7 1.7 Key components of the pathological process of ALS include glutamate excitotoxicity disturbances in cytoskeletal protein metabolism (e.g., e.g. 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113054 16624536 146851 20996 11179 SOD1 ALS ALS 30 1.7 to understanding the role of the innate immune response in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113057 16624536 146858 20996 11179 SOD1 ALS ALS 2 1.7 Microglia in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113058 16624536 146859 20996 11179 SOD1 ALS ALS 15 1.7 neurochemical evidence for the proliferation and activation of microglia in ALS 15 16 17 18 19 20 21 22 23 24 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113060 16624536 146862 20996 11179 SOD1 ALS ALS 16 1.7 macrophage-colony stimulating factor (M-CSF) M-CSF receptor expression is upregulated in ALS precentral gyrus 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113062 16624536 146863 20996 11179 SOD1 ALS ALS 16 1.7 domains of its receptors TNFRI and TNFRII are increased in ALS serum 27 and 28 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113064 16624536 146864 20996 11179 SOD1 ALS ALS 23 1.7 of microglia-mediated protein oxidative pathology 32 is also observed in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113065 16624536 146865 20996 11179 SOD1 ALS ALS 12 1.7 issue as to when in the course of degeneration in ALS that microglial activation becomes prominent is being addressed through neuroimaging 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113066 16624536 146866 20996 11179 SOD1 ALS ALS 33 1.7 of microglia microglial activation can be observed in patients with ALS 33 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113067 16624536 146868 20996 11179 SOD1 ALS ALS 28 1.7 possibility that microglial activation occurs early in the pathogenesis of ALS ( Fig 2 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113074 16624536 146874 20996 11179 SOD1 ALS ALS 28 1.7 of the macrophage lineage can significantly slow the progression of ALS 38 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113076 16624536 146876 20996 11179 SOD1 ALS ALS 37 1.7 and the rate of propagation of motor neuron degeneration in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113079 16624536 146880 20996 11179 SOD1 ALS ALS 20 1.7 between inflammation and the progression of motor neuron disease in ALS arises from the study of murine models of motor neuron 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113085 16624536 146886 10676 6121 IRF6 LPS LPS 11 0.6 neuron disease is accelerated by chronic stimulation of inflammation using LPS in the SOD1 G37R mouse model of ALS with increasing 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 1 1 0 0 0 113087 16624536 146886 20996 11179 SOD1 ALS ALS 19 1.7 inflammation using LPS in the SOD1 G37R mouse model of ALS with increasing levels of pro-inflammatory cytokines and increased expression of 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113093 16624536 146896 6554 3309 ELA2 HNE HNE 12 0.0 can be triggered by oxidative injury mediated through hydroxynonenal (HNE) HNE formation and the triggering of apoptosis 60 suggesting that another 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 113094 16624536 146897 20996 11179 SOD1 ALS ALS 31 1.7 neuron cell line an important consideration in the context of ALS is the selective vulnerability of motor neurons in vivo 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113107 16624536 146909 10676 6121 IRF6 LPS LPS-stimulated 20 0.6 SOD1 transgenic mice show decreased IL-6 production in response to LPS-stimulated activation compared to controls 37 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 1 1 0 0 0 113119 16624536 146917 10676 6121 IRF6 LPS LPS 29 0.6 and suppressed neuronal cell death induced by microglia activated with LPS and interferon-gamma (IFN-_amp_#x3b3;), IFN-_amp_#x3b3 in a dose-dependent manner 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 1 1 0 0 0 113122 16624536 146918 20996 11179 SOD1 ALS ALS 24 1.7 may therefore represent a viable target for pharmacological manipulation in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113130 16624536 146919 14728 8024 NTF4 NT4 NT-4 35 0.0 factors (e.g., e.g. plasminogen TGF-_amp_#x3b2 bFGF BDNF NGF NT-3 and NT-4 80 81 and 82 11 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 113132 16624536 146920 10676 6121 IRF6 LPS LPS 18 0.6 that at higher concentrations both mimic the cytotoxic effects of LPS 83 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 1 1 0 0 0 113166 16624536 146936 20996 11179 SOD1 ALS ALS 1 1.7 In ALS neuronal function is compromised 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113167 16624536 146944 10676 6121 IRF6 LPS LPS-activated 11 0.6 it is an incorrect assumption to extrapolate the behaviour of LPS-activated microglia to that of microglia neighbouring degenerating motor neurons in 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 1 1 0 0 0 113168 16624536 146949 20996 11179 SOD1 ALS ALS 11 1.7 concept is reviewed in the discussion of adaptive immunity in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113169 16624536 146951 20996 11179 SOD1 ALS ALS 5 1.7 Adaptive and acquired immunity in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113170 16624536 146954 22088 15934 TH1L TH1 Th1 14 0.0 present antigens to a distinct subset of helper T-cells (Th1 Th1 cells capable of producing additional cytokines in order to amplify 2 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 113171 16624536 146955 20996 11179 SOD1 ALS ALS 9 1.7 A study investigating systemic immune system changes in sporadic ALS revealed that increased levels of circulating monocytes and macrophages were 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113173 16624536 146956 11629 6493 LAMC2 CSF CSF 13 0.3 protein-1 (MCP-1) MCP-1 are seen in the cerebrospinal fluid (CSF) CSF from ALS patients 98 and 99 13 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 113174 16624536 146956 20996 11179 SOD1 ALS ALS 15 1.7 MCP-1 are seen in the cerebrospinal fluid (CSF) CSF from ALS patients 98 and 99 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113178 16624536 146958 22088 15934 TH1L TH1 Th1 5 0.0 These cells present antigen to Th1 cells which can in turn produce IL-1 IFN-_amp_#x3b3 TNF-_amp_#x3b2 and 2 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 113179 16624536 146960 20996 11179 SOD1 ALS ALS 27 1.7 to disease end stage time points in mouse models of ALS 34 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113180 16624536 146960 22088 15934 TH1L TH1 Th1 13 0.0 of cells mediating adaptive immunity in the CNS such as Th1 infiltrates is limited to disease end stage time points in 2 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 113183 16624536 146963 22088 15934 TH1L TH1 Th1 10 0.0 This efficacy is thought to result from the sensitization of Th1 cells to self-antigens 2 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 113184 16624536 146964 22088 15934 TH1L TH1 Th1 7 0.0 This theoretically leads to an increase in Th1 migration to injured sites activation and production of cytokines and 2 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 113191 16624536 146967 10676 6121 IRF6 LPS LPS-treated 33 0.6 (an an inhibitor of NF-_amp_#x3ba B by microglia compared to LPS-treated microglia 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 1 1 0 0 0 113193 16624536 146968 22088 15934 TH1L TH1 Th1 16 0.0 antigen-presenting capability and were therefore able to more efficiently recruit Th1 cells and increase glutamate clearance 95 2 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 113194 16624536 146972 20996 11179 SOD1 ALS ALS 17 1.7 the role of IgG in inducing altered calcium permeability in ALS motor neurons IgG isolated from ALS patient serum injected intraperitoneally 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113195 16624536 146972 20996 11179 SOD1 ALS ALS 23 1.7 altered calcium permeability in ALS motor neurons IgG isolated from ALS patient serum injected intraperitoneally into mice has been shown to 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113196 16624536 146973 20996 11179 SOD1 ALS ALS 11 1.7 in vivo studies have demonstrated the ability of passively transferred ALS IgG to cause recruitment of activated microglia 104 and motor 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113197 16624536 146974 20996 11179 SOD1 ALS ALS 16 1.7 mixed primary spinal cord cultures that IgG from patients with ALS induces apoptosis via the caspase-3 pathway selectively in motor neurons 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113198 16624536 146975 20996 11179 SOD1 ALS ALS 6 1.7 One experiment demonstrated the ability of ALS IgG to shift the activation curve of calcium current indicating 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113199 16624536 146976 20996 11179 SOD1 ALS ALS 20 1.7 demonstrate such effects in rat cerebral synaptosomes thus concluding that ALS IgG is ineffective in enhancing presynaptic calcium influx 109 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113200 16624536 146980 20996 11179 SOD1 ALS ALS 20 1.7 also become reactive in areas of motor neuron degeneration in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113201 16624536 146982 20996 11179 SOD1 ALS ALS 11 1.7 function as executors of glutamate clearance may be compromised in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113204 16624536 146984 20996 11179 SOD1 ALS ALS 7 1.7 Although the evidence is controversial astrocytes in ALS have been observed to have decreased expression of the glutamate 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113207 16624536 146985 20996 11179 SOD1 ALS ALS 21 1.7 EAAT2 has been demonstrated in normal controls in addition to ALS patients 112 and 113 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113209 16624536 146987 20996 11179 SOD1 ALS ALS 10 1.7 As discussed in relation to adaptive and acquired immunity in ALS MCP-1 concentrations are significantly increased in both serum and cerebrospinal 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113211 16624536 146987 11629 6493 LAMC2 CSF CSF 22 0.3 are significantly increased in both serum and cerebrospinal fluid (CSF) CSF from ALS patients 13 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 113212 16624536 146987 20996 11179 SOD1 ALS ALS 24 1.7 increased in both serum and cerebrospinal fluid (CSF) CSF from ALS patients 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113214 16624536 146988 20996 11179 SOD1 ALS ALS 7 1.7 MCP-1 immunoreactivity is highest in astrocytes in ALS spinal cord suggesting that astrocytes have an important role in 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113215 16624536 146988 20996 11179 SOD1 ALS ALS 25 1.7 important role in mediating the inflammatory response to injury in ALS 98 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113227 16624536 146995 20996 11179 SOD1 ALS ALS 8 1.7 Returning to the work of Raoul et al. ALS motor neurons are particularly susceptible to Fas signaling and the 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113229 16624536 146999 20996 11179 SOD1 ALS ALS 3 1.7 Anti-inflammatory treatment of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113230 16624536 147000 20996 11179 SOD1 ALS ALS 10 1.7 The identification of microglial activation and proliferation as hallmarks of ALS in vivo and as contributors to motor neuron death in 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113233 16624536 147006 20996 11179 SOD1 ALS ALS 10 1.7 led to phase I/II I II studies of minocycline in ALS patients 134 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113239 16624536 147012 20996 11179 SOD1 ALS ALS 19 1.7 of the COX inhibitors tested have shown efficacy in human ALS patients 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113240 16624536 147017 20996 11179 SOD1 ALS ALS 17 1.7 for microglia and their inflammatory products in the pathogenesis of ALS the most significant pieces of information remain elusive 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113241 16624536 147019 20996 11179 SOD1 ALS ALS 18 1.7 motor neurons and take on a protective role or is ALS a disease with auto-immune characteristics 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113243 16624536 147022 20996 11179 SOD1 ALS ALS 6 1.7 Other studies suggest however that in ALS microglia can have cytotoxic potential regardless of the health status 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113245 16624536 147026 20996 11179 SOD1 ALS ALS 3 1.7 As discussed previously ALS is clearly a multi-factorial disease in which complex neuronal_amp_#x2013 glial 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113246 16624536 147028 20996 11179 SOD1 ALS ALS 12 1.7 also important that the relationships between various pathological features of ALS intrinsic to motor neurons themselves and the glial inflammatory response 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113248 16624536 147031 20996 11179 SOD1 ALS ALS 10 1.7 Immunity is therefore a process that is potentially altered in ALS and as such is an intriguing candidate for therapeutic intervention 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113249 16624536 147032 20996 11179 SOD1 ALS ALS 6 1.7 This is not to say that ALS is a disease of cells of the macrophage lineage 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113250 16624536 147033 20996 11179 SOD1 ALS ALS 5 1.7 Rather the evidence suggests that ALS is a disease in which inflammation remains a theoretically beneficial 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113251 16624536 147034 20996 11179 SOD1 ALS ALS 21 1.7 creates controversy as to their role in the pathogenesis of ALS but also offers therapeutic potential as a useful tool in 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113252 16624536 147034 20996 11179 SOD1 ALS ALS 41 1.7 in the modulation of factors influencing motor neuron death in ALS such as release of inflammatory mediators with pro-apoptotic effects and 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 113253 16624536 147035 20996 11179 SOD1 ALS ALS 8 1.7 Perhaps inflammation is a key determinant of the ALS disease process but its elimination as a therapeutic objective may 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000788452378603699<>ScoreDetail__5468|IGFALS|0.000436151439801075__11179|SOD1|0.000788452378603699__ 0 0 0 0 0 115231 16647138 150270 23681 19683 UHMK1 KIS Kis 21 0.6 2 COX and LOX under normal or stimulated situations ( Kis et al. 2003 Kis et al. 2004 Kolko et al. 2 JUMiner_v2.2 1 2 34 0 0 0 0 0 0 0 0 115232 16647138 150270 23681 19683 UHMK1 KIS Kis 26 0.6 under normal or stimulated situations ( Kis et al. 2003 Kis et al. 2004 Kolko et al. 2005 Shaftel et al. 2 JUMiner_v2.2 1 2 34 0 0 0 0 0 0 0 0 115237 16647138 150274 11001 28961 KIAA0101 PAF PAF 18 0.3 1-alkyl-2-lyso-sn -glycero-3-phosphocholine is the immediate precursor for platelet-activating factor (PAF), PAF a potent inflammatory mediator 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115238 16647138 150275 11001 28961 KIAA0101 PAF PAF 5 0.3 Besides inflammation in brain tissue PAF modulates transcription factors and gene expression and is involved in 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115244 16647138 150276 18723 10261 ROS1 ROS ROS 17 0.0 LOX and EPOX-catalyzed reactions also produce reactive oxygen species (ROS) ROS 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115245 16647138 150277 18723 10261 ROS1 ROS ROS 0 0.0 ROS include oxygen free radicals (superoxide superoxide radicals hydroxyl and alkoxyl 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115246 16647138 150278 18723 10261 ROS1 ROS ROS 3 0.0 At low levels ROS function as signaling intermediates in the regulation of fundamental cell 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115247 16647138 150279 18723 10261 ROS1 ROS ROS 3 0.0 At higher concentration ROS contribute to neural membrane damage when the balance between reducing 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115248 16647138 150280 18723 10261 ROS1 ROS ROS 5 0.0 The other biological targets of ROS may be membrane proteins unsaturated lipids and DNA ( Berlett 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115249 16647138 150281 18723 10261 ROS1 ROS ROS 3 0.0 The reaction between ROS and proteins or unsaturated lipids in the plasma membrane leads 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115250 16647138 150282 19891 29546 SH3YL1 Ray Ray 24 0.9 decreased activity of membrane-bound enzymes ion channels and receptors ( Ray et al. 1994 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115261 16647138 150313 16457 8891 PGD PGD PGD 7 0.3 Among the dilator prostanoids are the prostaglandins (PGD PGD 2 and PGE 2 and prostacyclin (PGI PGI 2 whereas 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 1 1 0 0 0 115262 16647138 150313 8612 4458 GPI PGI PGI 15 0.6 prostaglandins (PGD PGD 2 and PGE 2 and prostacyclin (PGI PGI 2 whereas constrictor prostanoids include thromboxane (TXA TXA 2 and 1 JUMiner_v2.2 1 2 prostacyclin 0 2 1044 TotalCon:2<>1044|BGN|633|Complete__4458|GPI|2821|Complete__<>AvaiableGeneRif=2<>BEST:1044|BGN|0.000317087492660012<>ScoreDetail__1044|BGN|0.000317087492660012__4458|GPI|0.000299625468164794__ 0 0 0 0 0 115265 16647138 150315 8612 4458 GPI PGI PGI 16 0.6 is the most abundant prostanoid followed by PGE 2 whereas PGI 2 is the principal prostanoid in human CSF ( Abdel-Halim 1 JUMiner_v2.2 1 2 prostacyclin 0 2 1044 TotalCon:2<>1044|BGN|633|Complete__4458|GPI|2821|Complete__<>AvaiableGeneRif=2<>BEST:1044|BGN|0.000317087492660012<>ScoreDetail__1044|BGN|0.000317087492660012__4458|GPI|0.000299625468164794__ 0 0 0 0 0 115266 16647138 150315 11629 6493 LAMC2 CSF CSF 24 0.0 2 whereas PGI 2 is the principal prostanoid in human CSF ( Abdel-Halim et al. 1980b 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115267 16647138 150316 16457 8891 PGD PGD PGD 7 0.3 The predominant prostanoid in rodent brains is PGD 2 ( Abdel-Halim et al. 1980a 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 1 1 0 0 0 115270 16647138 150324 8612 4458 GPI PGI PGI 14 0.6 to several prostaglandins thromboxanes (TXA TXA 2 and prostacyclins (PGI PGI 2 ( Fig 2 1 JUMiner_v2.2 1 2 prostacyclin 0 2 1044 TotalCon:2<>1044|BGN|633|Complete__4458|GPI|2821|Complete__<>AvaiableGeneRif=2<>BEST:1044|BGN|0.000317087492660012<>ScoreDetail__1044|BGN|0.000317087492660012__4458|GPI|0.000299625468164794__ 0 0 0 0 0 115336 16647138 150357 10676 6121 IRF6 LPS LPS 15 0.3 increased in microglial cells after intraperitoneal administration of lipopolysaccharide (LPS), LPS whereas neuronal COX-2 remains unchanged ( Elmquist et al. 1997 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 115339 16647138 150358 10676 6121 IRF6 LPS LPS 21 0.3 PGE 2 TXA 2 and TXB 2 upon stimulation by LPS are several times higher than in astrocytes but lower than 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 115360 16647138 150368 23681 19683 UHMK1 KIS Kis 21 0.6 relates to the vascular density of a given region ( Kis et al. 2004 2 JUMiner_v2.2 1 2 34 0 0 0 0 0 0 0 0 115364 16647138 150370 23681 19683 UHMK1 KIS Kis 9 0.6 Cerebral endothelial cells showed the highest COX-3 expression ( Kis et al. 2003 2 JUMiner_v2.2 1 2 34 0 0 0 0 0 0 0 0 115380 16647138 150382 23681 19683 UHMK1 KIS Kis 18 0.6 variants some with and others without any COX activity ( Kis et al. 2005 Simmons et al. 2005 and Snipes et 2 JUMiner_v2.2 1 2 34 0 0 0 0 0 0 0 0 115401 16647138 150405 12108 6709 LTA LTA LTA 14 0.0 reaction generating an unstable epoxide intermediate leukotriene A 4 (LTA LTA 4 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115402 16647138 150406 12108 6709 LTA LTA LTA 0 0.0 LTA 4 is metabolized to LTB 4 by LTA 4 hydrolase 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115403 16647138 150406 12110 6711 LTB LTB LTB 5 0.0 LTA 4 is metabolized to LTB 4 by LTA 4 hydrolase or to LTC 4 by 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115404 16647138 150406 12108 6709 LTA LTA LTA 8 0.0 LTA 4 is metabolized to LTB 4 by LTA 4 hydrolase or to LTC 4 by conjugation of glutathione 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115405 16647138 150407 12108 6709 LTA LTA LTA 0 0.0 LTA 4 is the precursor for the family of cysteinyl leukotrienes 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115413 16647138 150412 21242 11283 SRC SRC Src 22 0.0 but has no enzymic activity itself 5-LOX also contains an Src homology 3 (SH3) SH3 binding motif which may be involved 2 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115459 16647138 150453 11001 28961 KIAA0101 PAF PAF 26 0.3 2 with the generation of PGE 2 LTB 4 and PAF through COX-2 LOX and acetyl-CoA acetyltransferase reactions respectively 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115462 16647138 150453 12110 6711 LTB LTB LTB 22 0.0 stimulation of iPLA 2 with the generation of PGE 2 LTB 4 and PAF through COX-2 LOX and acetyl-CoA acetyltransferase reactions 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115463 16647138 150454 11001 28961 KIAA0101 PAF PAF 22 0.3 as cPLA 2 and is associated with the generation of PAF lipoxins and the pro-resolving prostaglandin PGD 2 ( Gilroy et 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115464 16647138 150454 16457 8891 PGD PGD PGD 28 0.3 with the generation of PAF lipoxins and the pro-resolving prostaglandin PGD 2 ( Gilroy et al. 2004 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 1 1 0 0 0 115469 16647138 150473 832 549 AOC2 RAO Rao 34 0.3 mitochondrial oxyradical generation and mild calcium overload ( Sastry and Rao 2000 2 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115476 16647138 150477 832 549 AOC2 RAO Rao 19 0.3 and redox status also dictates this mode ( Sastry and Rao 2000 2 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115479 16647138 150483 18723 10261 ROS1 ROS ROS 18 0.0 the increased production of free radicals reactive oxygen species (ROS) ROS and hence for lipid peroxidation and oxidative damage to membrane 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115483 16647138 150493 8612 4458 GPI PGI PGI 11 0.6 behavior in rats can be produced by peripheral administration of PGI 2 and PGE 2 ( Taiwo and Levine 1990 1 JUMiner_v2.2 1 2 prostacyclin 0 2 1044 TotalCon:2<>1044|BGN|633|Complete__4458|GPI|2821|Complete__<>AvaiableGeneRif=2<>BEST:1044|BGN|0.000317087492660012<>ScoreDetail__1044|BGN|0.000317087492660012__4458|GPI|0.000299625468164794__ 0 0 0 0 0 115505 16647138 150510 16457 8891 PGD PGD PGD 21 0.3 COX-1/COX-2 COX-1 COX-2 pathways (PGE PGE 2 PGF 2a and PGD 2 are modulators of synaptic activity and efficacy by exerting 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 1 1 0 0 0 115507 16647138 150512 16457 8891 PGD PGD PGD 8 0.3 The addition of PGE 2 but not PGD 2 or PGF 2_amp_#x3b1 reverses COX-2-mediated suppression of LTP 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 1 1 0 0 0 115514 16647138 150517 11934 6664 LOX LOX LOX-generated 0 0.0 LOX-generated AA metabolites are also implicated in the modulation of synaptic 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115523 16647138 150559 11629 6493 LAMC2 CSF CSF 5 0.0 F4-NPs occur in cerebrospinal fluid (CSF) CSF from normal individuals 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115524 16647138 150560 11629 6493 LAMC2 CSF CSF 8 0.0 The levels of F4-NP are significantly higher in CSF from patients with Alzheimer's disease ( Reich et al. 2001 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115525 16647138 150564 11001 28961 KIAA0101 PAF PAF 2 0.3 Platelet-activating factor (PAF) PAF 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115526 16647138 150565 11001 28961 KIAA0101 PAF PAF 0 0.3 PAF is a short-lived biologically active ether lipid with diverse physiological 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115527 16647138 150568 11001 28961 KIAA0101 PAF PAF 17 0.3 platelets endothelial cells mast cells neutrophils and neural cells release PAF 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115528 16647138 150569 11001 28961 KIAA0101 PAF PAF 7 0.3 It exerts its biological effects by activating PAF receptors that consequently activate leukocytes stimulate platelet aggregation and induce 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115529 16647138 150570 11001 28961 KIAA0101 PAF PAF 0 0.3 PAF receptors are linked to G-proteins and activate a variety of 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115530 16647138 150571 11001 28961 KIAA0101 PAF PAF 0 0.3 PAF receptors have been cloned from a number of sources including 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115531 16647138 150572 11001 28961 KIAA0101 PAF PAF 0 0.3 PAF activates a wide variety of cells including neutrophils eosinophils monocytes 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115532 16647138 150573 11001 28961 KIAA0101 PAF PAF 4 0.3 The physiological activity of PAF is not limited to its proinflammatory effects 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115533 16647138 150574 11001 28961 KIAA0101 PAF PAF 0 0.3 PAF is also involved in a variety of other settings including 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115534 16647138 150577 11001 28961 KIAA0101 PAF PAF 7 0.3 Mammalian tissues have three different pathways for PAF synthesis ( Honda et al. 2002 and Snyder 1995 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115535 16647138 150582 11001 28961 KIAA0101 PAF PAF 9 0.3 This reaction provides the inter-relationship between the synthesis of PAF and eicosanoids 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115536 16647138 150583 11001 28961 KIAA0101 PAF PAF 4 0.3 The second step of PAF production requires the conversion of lyso-PAF to PAF by the 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115537 16647138 150583 11001 28961 KIAA0101 PAF PAF 12 0.3 step of PAF production requires the conversion of lyso-PAF to PAF by the enzyme acetyl CoA lyso-PAF acetyltransferase 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115538 16647138 150586 11001 28961 KIAA0101 PAF PAF 5 0.3 The synthesis de novo of PAF requires three steps 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115539 16647138 150590 11001 28961 KIAA0101 PAF PAF 7 0.3 The third pathway for the synthesis of PAF is the oxidative fragmentation of phosphatidylcholines 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115540 16647138 150592 11001 28961 KIAA0101 PAF PAF 7 0.3 These 1-O -alkyl phospholipids interact with PAF receptors and induce a variety of biological effects ( Stafforini 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115541 16647138 150595 11001 28961 KIAA0101 PAF PAF 0 0.3 PAF is hydrolyzed by PAF acetylhydrolases found in all mammalian tissues 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115542 16647138 150595 11001 28961 KIAA0101 PAF PAF 4 0.3 PAF is hydrolyzed by PAF acetylhydrolases found in all mammalian tissues ( Snyder 1995 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115543 16647138 150596 11001 28961 KIAA0101 PAF PAF 13 0.3 human plasma LDL-PLA 2 and the other is bovine brain PAF acetylhydrolase ( Arai 2002 and Tjoelker and Stafforini 2000 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115544 16647138 150597 11001 28961 KIAA0101 PAF PAF 9 0.3 Although both are serine-dependent enzymes their ability to hydrolyze PAF is quite different 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115545 16647138 150599 11001 28961 KIAA0101 PAF PAF 3 0.3 In addition to PAF acetylhydrolase activity plasma LDL-PLA 2 also has a high PLA 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115546 16647138 150600 11001 28961 KIAA0101 PAF PAF 1 0.3 Plasma PAF acetylhydrolase has a dual role in metabolism 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115547 16647138 150601 11001 28961 KIAA0101 PAF PAF 4 0.3 It not only inactivates PAF released from inflammatory cells but it also eliminates oxidized fatty 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115548 16647138 150602 11001 28961 KIAA0101 PAF PAF 2 0.3 Bovine brain PAF acetylhydrolase is an _amp_#x3b1 _amp_#x3b2 and _amp_#x3b3 heterotrimer (Mr Mr 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115549 16647138 150603 11001 28961 KIAA0101 PAF PAF 5 0.3 Mammalian tissues have two other PAF acetylhydrolases 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115550 16647138 150608 11001 28961 KIAA0101 PAF PAF 3 0.3 The binding of PAF to PAF receptors results in the activation of diverse intracellular 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115551 16647138 150608 11001 28961 KIAA0101 PAF PAF 5 0.3 The binding of PAF to PAF receptors results in the activation of diverse intracellular signal transduction 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115552 16647138 150610 11001 28961 KIAA0101 PAF PAF 0 0.3 PAF receptor antagonists block all these processes 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115553 16647138 150611 11001 28961 KIAA0101 PAF PAF 0 0.3 PAF stimulates phosphatidylinositol 3-kinase and mitogen-activated protein (MAP) MAP kinase and 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115555 16647138 150612 11001 28961 KIAA0101 PAF PAF 1 0.3 Moreover PAF also acts as an intracellular mediator ( Marcheselli and Bazan 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115556 16647138 150613 11001 28961 KIAA0101 PAF PAF 3 0.3 The binding of PAF to intracellular sites elicits gene expression in neuronal and glial 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115557 16647138 150614 11001 28961 KIAA0101 PAF PAF 1 0.3 Furthermore PAF receptors are also involved in the release of prostaglandin E 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115558 16647138 150616 11001 28961 KIAA0101 PAF PAF 0 0.3 PAF also stimulates the inducible isoform of COX-2 ( Bazan et 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115561 16647138 150618 11001 28961 KIAA0101 PAF PAF 4 0.3 Preincubation of cells with PAF antagonist BN 50730 blocks stimulation of the immediate early gene 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115563 16647138 150619 11001 28961 KIAA0101 PAF PAF 1 0.3 Thus PAF is associated with short- and long-term responses of cells to 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115564 16647138 150623 11001 28961 KIAA0101 PAF PAF 0 0.3 PAF antagonists block the development of long-term potentiation ( Del Cerro 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115565 16647138 150623 11001 28961 KIAA0101 PAF PAF 32 0.3 and Zorumski 1996 and Kornecki et al. 1996 indicating that PAF modulates long-term potentiation 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115566 16647138 150624 11001 28961 KIAA0101 PAF PAF 5 0.3 In rats the administration of PAF antagonists impairs spatial learning and inhibitory avoidance tests while treatment 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115567 16647138 150624 11001 28961 KIAA0101 PAF PAF 22 0.3 avoidance tests while treatment with a synthetic non-hydrolyzable analog of PAF 1-O -hexadecyl-2-methylcarbamoyl-sn -glycerol-3-phosphocholine enhances memory ( Packard et al. 1996 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115568 16647138 150625 11001 28961 KIAA0101 PAF PAF 3 0.3 Intracarotid infusion of PAF decreases cerebral blood flow with a concomitant increase in the 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115569 16647138 150626 11001 28961 KIAA0101 PAF PAF 0 0.3 PAF administration causes a dose-dependent decrease in spinal cord blood flow 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115570 16647138 150627 11001 28961 KIAA0101 PAF PAF 1 0.3 A PAF receptor antagonist can block this decrease in blood flow ( 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115571 16647138 150628 11001 28961 KIAA0101 PAF PAF 1 0.3 Although PAF does not cross the blood_amp_#x2013 brain barrier itself it induces 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115572 16647138 150629 11001 28961 KIAA0101 PAF PAF 0 0.3 PAF is also an essential component of the intricate mechanisms by 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115573 16647138 150631 11001 28961 KIAA0101 PAF PAF 2 0.3 Involvement of PAF in neurological disorders 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115574 16647138 150632 11001 28961 KIAA0101 PAF PAF 10 0.3 Several pathological processes including allergy inflammation shock and trauma involve PAF ( Ishii et al. 1997 Ishii et al. 1998 Nagase 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115575 16647138 150634 11001 28961 KIAA0101 PAF PAF 0 0.3 PAF was identified as a pathological mediator by injecting it into 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115576 16647138 150634 11001 28961 KIAA0101 PAF PAF 23 0.3 measuring the intensity of inflammation and by the ability of PAF antagonists to block PAF-mediated responses ( Maclennan et al. 1996 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115577 16647138 150634 11001 28961 KIAA0101 PAF PAF-mediated 27 0.0 inflammation and by the ability of PAF antagonists to block PAF-mediated responses ( Maclennan et al. 1996 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115578 16647138 150635 11001 28961 KIAA0101 PAF PAF 3 0.3 Excessive levels of PAF are associated with neuronal injury in brain tissue and are 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115579 16647138 150636 11001 28961 KIAA0101 PAF PAF 2 0.3 Administration of PAF antagonists has beneficial effects in various models of cerebral ischemia 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115580 16647138 150637 11001 28961 KIAA0101 PAF PAF 0 0.3 PAF activates inflammatory cells and increases vasopermeability a role it may 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115581 16647138 150638 11001 28961 KIAA0101 PAF PAF 2 0.3 Administration of PAF antagonists improves the neurological score of patients with multiple sclerosis 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115587 16647138 150644 11001 28961 KIAA0101 PAF PAF 6 0.3 In models of lissencephaly in vitro PAF agonists and antagonists can alter migration of cerebral granule and 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115588 16647138 150644 11001 28961 KIAA0101 PAF PAF 21 0.3 alter migration of cerebral granule and hippocampal cells indicating that PAF may act as a neuronal migration stop signal ( Adachi 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115589 16647138 150645 11001 28961 KIAA0101 PAF PAF-mediated 4 0.0 Collective evidence suggests that PAF-mediated processes are involved in the pathogenesis of many neurological conditions 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115590 16647138 150652 16457 8891 PGD PGD PGD 0 0.3 PGD 2 and PGI 2 are generally vasorelaxants 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 1 1 0 0 0 115591 16647138 150652 8612 4458 GPI PGI PGI 3 0.6 PGD 2 and PGI 2 are generally vasorelaxants 1 JUMiner_v2.2 1 2 prostacyclin 0 2 1044 TotalCon:2<>1044|BGN|633|Complete__4458|GPI|2821|Complete__<>AvaiableGeneRif=2<>BEST:1044|BGN|0.000317087492660012<>ScoreDetail__1044|BGN|0.000317087492660012__4458|GPI|0.000299625468164794__ 0 0 0 0 0 115593 16647138 150656 8612 4458 GPI PGI PGI 13 0.6 in systemic blood pressure cause the release of PGE 2 PGI 2 and PGF 2_amp_#x3b1 from brain ( Chemtob et al. 1 JUMiner_v2.2 1 2 prostacyclin 0 2 1044 TotalCon:2<>1044|BGN|633|Complete__4458|GPI|2821|Complete__<>AvaiableGeneRif=2<>BEST:1044|BGN|0.000317087492660012<>ScoreDetail__1044|BGN|0.000317087492660012__4458|GPI|0.000299625468164794__ 0 0 0 0 0 115595 16647138 150657 8612 4458 GPI PGI PGI 0 0.6 PGI 2 which is released in response to hypercapnia hypotension and 1 JUMiner_v2.2 1 2 prostacyclin 0 2 1044 TotalCon:2<>1044|BGN|633|Complete__4458|GPI|2821|Complete__<>AvaiableGeneRif=2<>BEST:1044|BGN|0.000317087492660012<>ScoreDetail__1044|BGN|0.000317087492660012__4458|GPI|0.000299625468164794__ 0 0 0 0 0 115620 16647138 150751 16457 8891 PGD PGD PGD 21 0.3 specific target of PGE 2 but not of PGF 2_amp_#x3b1 PGD 2 or PGI 2 which reduced inhibitory glycinergic synaptic transmission 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 1 1 0 0 0 115621 16647138 150751 8612 4458 GPI PGI PGI 25 0.6 PGE 2 but not of PGF 2_amp_#x3b1 PGD 2 or PGI 2 which reduced inhibitory glycinergic synaptic transmission at low nanomolar 1 JUMiner_v2.2 1 2 prostacyclin 0 2 1044 TotalCon:2<>1044|BGN|633|Complete__4458|GPI|2821|Complete__<>AvaiableGeneRif=2<>BEST:1044|BGN|0.000317087492660012<>ScoreDetail__1044|BGN|0.000317087492660012__4458|GPI|0.000299625468164794__ 0 0 0 0 0 115633 16647138 150766 16457 8891 PGD PGD PGD 8 0.3 Exogenous application of PGE 2 but not PGD 2 or PGF 2_amp_#x3b1 effectively reversed all of these actions 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 1 1 0 0 0 115638 16647138 150771 3353 1368 CA1 CA1 CA1 19 0.0 PGE 2 reduced somatic and dendritic membrane excitability in hippocampal CA1 pyramidal neurons in brain slices 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115640 16647138 150778 3353 1368 CA1 CA1 CA1 17 0.0 turn triggered Ca 2 elevations in adjacent neurons in the CA1 hippocampus 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115662 16647138 150803 3353 1368 CA1 CA1 CA1 9 0.0 The 12-LOX inhibitor baicalein totally blocked LTD in the CA1 region of hippocampal slices 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115665 16647138 150806 3353 1368 CA1 CA1 CA1 22 0.0 12-LOX metabolites in metabotropic-glutamate receptor-dependent long-term depression at hippocampal CA3_amp_#x2013 CA1 synapses 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115679 16647138 150834 8612 4458 GPI PGI PGI 6 0.6 (1997) 1997 using mice lacking prostacyclin (PGI PGI 2 receptors (IP), IP suggested that these receptors play a 1 JUMiner_v2.2 1 2 prostacyclin 0 2 1044 TotalCon:2<>1044|BGN|633|Complete__4458|GPI|2821|Complete__<>AvaiableGeneRif=2<>BEST:1044|BGN|0.000317087492660012<>ScoreDetail__1044|BGN|0.000317087492660012__4458|GPI|0.000299625468164794__ 0 0 0 0 0 115691 16647138 150839 16457 8891 PGD PGD PGD 7 0.3 When small amounts of PGE 2 PGD 2 PGF 2_amp_#x3b1 or PGI 2 were injected intrathecally into 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 1 1 0 0 0 115693 16647138 150839 8612 4458 GPI PGI PGI 14 0.6 small amounts of PGE 2 PGD 2 PGF 2_amp_#x3b1 or PGI 2 were injected intrathecally into the spinal canal in WT 1 JUMiner_v2.2 1 2 prostacyclin 0 2 1044 TotalCon:2<>1044|BGN|633|Complete__4458|GPI|2821|Complete__<>AvaiableGeneRif=2<>BEST:1044|BGN|0.000317087492660012<>ScoreDetail__1044|BGN|0.000317087492660012__4458|GPI|0.000299625468164794__ 0 0 0 0 0 115696 16647138 150844 16457 8891 PGD PGD PGD 6 0.3 (2001) 2001 employing wild-type and DP (PGD PGD 2 -receptor-deficient mice demonstrated that PGD 2 infusions into the 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 1 1 0 0 0 115697 16647138 150844 16457 8891 PGD PGD PGD 12 0.3 wild-type and DP (PGD PGD 2 -receptor-deficient mice demonstrated that PGD 2 infusions into the lateral ventricles increased non-rapid eye movement 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 1 1 0 0 0 115698 16647138 150844 18182 15922 REM1 REM REM 28 0.0 increased non-rapid eye movement (NREM), NREM with a decrease in REM sleep 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115699 16647138 150845 16457 8891 PGD PGD PGD 14 0.3 the amounts of NREM and REM sleep were unchanged by PGD 2 infusions demonstrating an involvement of DP receptors in PGD 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 1 1 0 0 0 115700 16647138 150845 16457 8891 PGD PGD PGD 24 0.3 PGD 2 infusions demonstrating an involvement of DP receptors in PGD 2 -induced NREM sleep 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 1 1 0 0 0 115701 16647138 150845 18182 15922 REM1 REM REM 9 0.0 In DP-deficient mice however the amounts of NREM and REM sleep were unchanged by PGD 2 infusions demonstrating an involvement 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115722 16647138 150862 10676 6121 IRF6 LPS LPS 11 0.3 enhanced in the brain after peripheral (intraperitoneal) intraperitoneal lipopolysaccharide (LPS) LPS or intravenous and intracerebral IL-1_amp_#x3b2 administration whereas COX-2 inhibitors suppress 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 115724 16647138 150864 10676 6121 IRF6 LPS LPS 9 0.3 (1999) 1999 assessed the febrile response to injection of intraperitoneal LPS in COX-1 and COX-2-deficient mice 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 115728 16647138 150865 10676 6121 IRF6 LPS LPS 8 0.3 The wild-type and COX-1 _amp_#x2212;/_amp_#x2212; _amp_#x2212 _amp_#x2212 mice responded to LPS with a 1_amp_#xb0 C rise in temperature whereas the COX-2 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 115731 16647138 150865 10676 6121 IRF6 LPS LPS-induced 31 0.3 no increase in temperature indicating that COX-2 is necessary for LPS-induced fever production 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 115740 16647138 150885 12201 13731 MAEA MAEA MAEA 5 0.3 Incubation with R (+) -methanandamide (MAEA), MAEA which is not a substrate for fatty acid amidohydrolase (FAAH), 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115742 16647138 150886 12201 13731 MAEA MAEA MAEA 12 0.3 inhibited the PGE 2 production induced by either AEA or MAEA a selective COX-2 inhibitor indicating induction of COX-2 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115745 16647138 150887 12201 13731 MAEA MAEA MAEA 2 0.3 AEA and MAEA increased the expression of COX-2 protein an action that AM-251 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115750 16647138 150893 6111 19199 DPPA3 Stella Stella 28 1.6 which are generated during robust stimulation of hippocampal slices ( Stella et al. 1997 tonically decrease basal excitatory transmission by modulating 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115751 16647138 150894 3353 1368 CA1 CA1 CA1 18 0.0 would have a disinhibitory effect enhancing transmission with depolarization of CA1 pyramidal neurons 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115756 16647138 150904 19891 29546 SH3YL1 Ray Ray 58 0.9 can contribute to restoration of some function following TBI ( Ray et al. 2002 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115760 16647138 150909 11629 6493 LAMC2 CSF CSF 6 0.0 In a subsequent study increased plasma CSF and brain levels of PGE 2 6-keto-PGF 1_amp_#x3b1 thromboxane B 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115762 16647138 150913 16457 8891 PGD PGD PGD 10 0.3 Azelastine an agent that inhibits the release of leukotrienes and PGD 2 from cultured human mast cells ( Shichijo et al. 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 1 1 0 0 0 115763 16647138 150913 3353 1368 CA1 CA1 CA1 24 0.0 cultured human mast cells ( Shichijo et al. 1998 protected CA1 neurons in hippocampal slices from injury elicited by fluid percussion 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115775 16647138 150931 12110 6711 LTB LTB LTB 18 0.0 changes in leukotrienes LTC 4 LTD 4 LTE 4 and LTB 4 in rat cerebrospinal fluid from 10 min to 7 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115776 16647138 150934 12110 6711 LTB LTB LTB 0 0.0 LTB 4 levels were lower and peaked with a two-fold increase 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115779 16647138 150948 12110 6711 LTB LTB LTB 12 0.0 of this enzyme is associated with the defective degradation of LTB 4 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115781 16647138 150949 12110 6711 LTB LTB LTB 7 0.0 This results in elevated urinary concentrations of LTB 4 LTC 4 and 20-OH-LTB 4 in SLS patients ( 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115787 16647138 150953 12110 6711 LTB LTB LTB 17 0.0 5-LOX inhibitor (Zileuton) Zileuton blocks peripheral SLS symptoms and inhibits LTB 4 synthesis it does not improve CNS symptoms ( Willemsen 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115788 16647138 150955 203 10522 ACSM3 SAH SAH 5 0.0 Cerebral ischemia and subarachnoid hemorrhage (SAH) SAH 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115798 16647138 150962 8612 4458 GPI PGI PGI 31 0.6 been attributed to blockade of the vasoprotective effects of COX-2-derived PGI 2 ( FitzGerald 2003 1 JUMiner_v2.2 1 2 prostacyclin 0 2 1044 TotalCon:2<>1044|BGN|633|Complete__4458|GPI|2821|Complete__<>AvaiableGeneRif=2<>BEST:1044|BGN|0.000317087492660012<>ScoreDetail__1044|BGN|0.000317087492660012__4458|GPI|0.000299625468164794__ 0 0 0 0 0 115829 16647138 151019 3353 1368 CA1 CA1 CA1 25 0.0 the generation of the irreversible depolarization induced in hippocampal slice CA1 pyramidal neurons by oxygen/glucose oxygen glucose deprivation 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115835 16647138 151027 3353 1368 CA1 CA1 CA1 11 0.0 observed the formation of small blebs on the surface of CA1 pyramidal neurons within 30 s of the rapid depolarization induced 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115840 16647138 151031 3353 1368 CA1 CA1 CA1 27 0.0 reperfusion in rats ( Buccellati et al. 1998 reduced ischemia-evoked CA1 hippocampal injury in a gerbil model ( Sasaki et al. 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115845 16647138 151034 3353 1368 CA1 CA1 CA1 18 0.0 ameliorated delayed (7 7 days neuronal deaths in the gerbil CA1 hippocampus 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115846 16647138 151035 3353 1368 CA1 CA1 CA1 13 0.0 study two lipoxygenase inhibitors AA-861 and BW-755C failed to protect CA1 neurons ( Nakagomi et al. 1989 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115856 16647138 151045 3353 1368 CA1 CA1 CA1 11 0.0 inhibitors significantly increased the number of healthy neurons in the CA1 hippocampus even when treatment was initiated 6 h after ischemia 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115865 16647138 151068 3353 1368 CA1 CA1 CA1 10 0.0 The lipoxygenase inhibitors AA-861 and BW-755C failed to protect gerbil CA1 hippocampal neurons from 5 min forebrain ischemia whereas the cyclooxygenase 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115869 16647138 151071 3353 1368 CA1 CA1 CA1 5 0.0 (2001) 2001 demonstrated significant protection of CA1 pyramidal cells following the application of two non-selective LOX inhibitors 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115878 16647138 151088 11629 6493 LAMC2 CSF CSF 10 0.0 The levels of 20-HETE a potent vasoconstrictor increase in the CSF of rats ( Kehl et al. 2002 and man ( 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115879 16647138 151088 203 10522 ACSM3 SAH SAH 33 0.0 Hacein-Bey et al. 2004 and Poloyac et al. 2005 following SAH 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115880 16647138 151090 11629 6493 LAMC2 CSF CSF 42 0.0 rats as well as reversing the increase in 20-HETE in CSF of rats after SAH ( Miyata et al. 2005 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115881 16647138 151090 203 10522 ACSM3 SAH SAH 46 0.0 reversing the increase in 20-HETE in CSF of rats after SAH ( Miyata et al. 2005 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115886 16647138 151095 18187 17922 REPIN1 AP4 AP4 16 0.0 _amp_#x3b1 -amino-3-hydroxy-5-methyl-4-isoxazole propionate (AMPA), AMPA kainate l -2-amino-4-phosphonobutanoate ( l -AP4 and trans -1-amino-cyclopentyl-1 3-dicarboxylate ( trans -ACPD receptors 11 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 115920 16647138 151116 10676 6121 IRF6 LPS LPS-induced 15 0.3 2 protects hippocampal and cortical neuronal cultures against glutamate-mediated or LPS-induced cytotoxicity ( Akaike et al. 1994 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 115928 16647138 151128 16457 8891 PGD PGD PGD 9 0.3 Spontaneous seizures in gerbils are associated with increases in PGD 2 concentrations in the cerebral cortex hippocampus and striatum and 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 1 1 0 0 0 115955 16647138 151157 7708 3811 FOXG1 QIN Qin 39 0.3 2002 Ho et al. 1999 Manev et al. 2000a and Qin et al. 2003 2 JUMiner_v2.2 1 2 34 0 0 0 0 0 0 0 0 115959 16647138 151158 7708 3811 FOXG1 QIN Qin 43 0.3 2 found in AD ( Pasinetti and Aisen 1998 and Qin et al. 2003 2 JUMiner_v2.2 1 2 34 0 0 0 0 0 0 0 0 115971 16647138 151161 7708 3811 FOXG1 QIN Qin 14 0.3 peptide generation through mechanisms that involve _amp_#x3b3 -secretase activity ( Qin et al. 2003 2 JUMiner_v2.2 1 2 34 0 0 0 0 0 0 0 0 115989 16647138 151175 20996 11179 SOD1 ALS ALS 3 2.9 Amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00148225451265134<>ScoreDetail__5468|IGFALS|0.0003272086584445__11179|SOD1|0.00148225451265134__ 0 0 0 0 0 115990 16647138 151176 20996 11179 SOD1 ALS ALS 0 2.9 ALS is a neurological disease that damages motor neurons in the 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00148225451265134<>ScoreDetail__5468|IGFALS|0.0003272086584445__11179|SOD1|0.00148225451265134__ 0 0 0 0 0 115991 16647138 151177 20996 11179 SOD1 ALS ALS 5 2.9 Although the primary cause of ALS is unknown excitotoxic and oxidative cross talk between motor neurons 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00148225451265134<>ScoreDetail__5468|IGFALS|0.0003272086584445__11179|SOD1|0.00148225451265134__ 0 0 0 0 0 115992 16647138 151177 20996 11179 SOD1 ALS ALS 27 2.9 surrounding glial cells may be involved in the pathogenesis of ALS ( Rao and Weiss 2004 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00148225451265134<>ScoreDetail__5468|IGFALS|0.0003272086584445__11179|SOD1|0.00148225451265134__ 0 0 0 0 0 115993 16647138 151177 832 549 AOC2 RAO Rao 29 0.3 cells may be involved in the pathogenesis of ALS ( Rao and Weiss 2004 2 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 115994 16647138 151182 20996 11179 SOD1 ALS ALS 3 2.9 Most cases of ALS are sporadic but 10% are familial 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00148225451265134<>ScoreDetail__5468|IGFALS|0.0003272086584445__11179|SOD1|0.00148225451265134__ 0 0 0 0 0 115997 16647138 151184 20996 11179 SOD1 ALS ALS 16 2.9 gene have been reported to occur in familial form of ALS ( Beal 1998a 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00148225451265134<>ScoreDetail__5468|IGFALS|0.0003272086584445__11179|SOD1|0.00148225451265134__ 0 0 0 0 0 116000 16647138 151185 20996 11179 SOD1 ALS ALS 14 2.9 also occurs in SOD1 transgenic mice at the onset of ALS ( Almer et al. 2001 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00148225451265134<>ScoreDetail__5468|IGFALS|0.0003272086584445__11179|SOD1|0.00148225451265134__ 0 0 0 0 0 116002 16647138 151186 20996 11179 SOD1 ALS ALS 17 2.9 SOD1 are related to the antioxidant activity that leads to ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00148225451265134<>ScoreDetail__5468|IGFALS|0.0003272086584445__11179|SOD1|0.00148225451265134__ 0 0 0 0 0 116003 16647138 151187 20996 11179 SOD1 ALS ALS 7 2.9 In an organotypic cell culture model of ALS the addition of a selective COX-2 inhibitor SC236 blocked the 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00148225451265134<>ScoreDetail__5468|IGFALS|0.0003272086584445__11179|SOD1|0.00148225451265134__ 0 0 0 0 0 116006 16647138 151187 20996 11179 SOD1 ALS ALS 40 2.9 COX-2 may play an important role in inflammatory processes in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00148225451265134<>ScoreDetail__5468|IGFALS|0.0003272086584445__11179|SOD1|0.00148225451265134__ 0 0 0 0 0 116009 16647138 151188 20996 11179 SOD1 ALS ALS 18 2.9 the survival of neurons in the SOD1 mouse model of ALS ( Drachman et al. 2002 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00148225451265134<>ScoreDetail__5468|IGFALS|0.0003272086584445__11179|SOD1|0.00148225451265134__ 0 0 0 0 0 116011 16647138 151189 20996 11179 SOD1 ALS ALS 15 2.9 PGE 2 levels may not be the root cause of ALS alterations in these parameters may be responsible for the induction 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00148225451265134<>ScoreDetail__5468|IGFALS|0.0003272086584445__11179|SOD1|0.00148225451265134__ 0 0 0 0 0 116012 16647138 151189 20996 11179 SOD1 ALS ALS 34 2.9 the induction and maintenance of inflammation during the progression of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00148225451265134<>ScoreDetail__5468|IGFALS|0.0003272086584445__11179|SOD1|0.00148225451265134__ 0 0 0 0 0 116015 16647138 151190 20996 11179 SOD1 ALS ALS 16 2.9 EPOX expression and their activities is not available for the ALS brain and spinal cord 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00148225451265134<>ScoreDetail__5468|IGFALS|0.0003272086584445__11179|SOD1|0.00148225451265134__ 0 0 0 0 0 116035 16647138 151211 17345 9449 PRNP CJD CJD 2 1.1 Creutzfeldt_amp_#x2013 Jakob disease (CJD) CJD 1 JUMiner_v2.2 1 2 creutzfeldt 0 0 0 0 0 0 0 0 116036 16647138 151212 17345 9449 PRNP CJD CJD 0 1.1 CJD is the most prevalent form of prion disease in humans 1 JUMiner_v2.2 1 2 creutzfeldt 0 0 0 0 0 0 0 0 116038 16647138 151213 17345 9449 PRNP CJD CJD 16 1.1 extracellular _amp_#x3b2 -helix rich prion protein (PrP PrP sc characterize CJD 1 JUMiner_v2.2 1 2 creutzfeldt 0 0 0 0 0 0 0 0 116043 16647138 151218 17345 9449 PRNP CJD CJD 17 1.1 oxidative stress may be closely associated with the pathogenesis of CJD ( Capellari et al. 1999 1 JUMiner_v2.2 1 2 creutzfeldt 0 0 0 0 0 0 0 0 116047 16647138 151219 17345 9449 PRNP CJD CJD 15 1.1 both COX-1 and COX-2 are significantly increased in brains from CJD patients compared to age-matched controls implicating both enzymes in the 1 JUMiner_v2.2 1 2 creutzfeldt 0 0 0 0 0 0 0 0 116048 16647138 151219 17345 9449 PRNP CJD CJD 28 1.1 to age-matched controls implicating both enzymes in the pathogenesis of CJD ( Deininger et al. 2003 1 JUMiner_v2.2 1 2 creutzfeldt 0 0 0 0 0 0 0 0 116049 16647138 151220 17345 9449 PRNP CJD CJD 6 1.1 In CSF from sporadic and familial CJD and in brain homogenates of scrapie-infected mice the upregulation of 1 JUMiner_v2.2 1 2 creutzfeldt 0 0 0 0 0 0 0 0 116053 16647138 151220 11629 6493 LAMC2 CSF CSF 1 0.0 In CSF from sporadic and familial CJD and in brain homogenates of 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 116054 16647138 151221 17345 9449 PRNP CJD CJD 12 1.1 on PGE 2 levels have been obtained in CSF of CJD variants ( Minghetti et al. 2002 1 JUMiner_v2.2 1 2 creutzfeldt 0 0 0 0 0 0 0 0 116055 16647138 151221 11629 6493 LAMC2 CSF CSF 10 0.1 Similar results on PGE 2 levels have been obtained in CSF of CJD variants ( Minghetti et al. 2002 6 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 116056 16647138 151222 17345 9449 PRNP CJD CJD 17 1.1 participate in the inflammatory process and have a role in CJD pathogenesis 1 JUMiner_v2.2 1 2 creutzfeldt 0 0 0 0 0 0 0 0 116057 16647138 151223 17345 9449 PRNP CJD CJD 17 1.1 death or is itself a consequence of neuronal disturbance in CJD remains to be defined 1 JUMiner_v2.2 1 2 creutzfeldt 0 0 0 0 0 0 0 0 116066 16647138 151233 17345 9449 PRNP CJD CJD 8 1.1 These observations implicate 5-LOX in the pathophysiology of CJD 1 JUMiner_v2.2 1 2 creutzfeldt 0 0 0 0 0 0 0 0 116068 16647138 151234 17345 9449 PRNP CJD CJD 7 1.1 Information on the involvement of EPOX in CJD is not available 1 JUMiner_v2.2 1 2 creutzfeldt 0 0 0 0 0 0 0 0 116140 16647138 151272 20996 11179 SOD1 ALS ALS 11 2.9 pathological situations such as acute neural trauma ischemia AD PD ALS and CJD stimulation and upregulation of COX LOX and EPOX 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00148225451265134<>ScoreDetail__5468|IGFALS|0.0003272086584445__11179|SOD1|0.00148225451265134__ 0 0 0 0 0 116141 16647138 151272 17345 9449 PRNP CJD CJD 13 1.1 such as acute neural trauma ischemia AD PD ALS and CJD stimulation and upregulation of COX LOX and EPOX isozyme activities 1 JUMiner_v2.2 1 2 creutzfeldt 0 0 0 0 0 0 0 0 105594 16737688 136276 20996 11179 SOD1 ALS ALS 3 3.2 Amyotrophic lateral sclerosis (ALS) ALS is a rapidly progressive invariably fatal neurological disease of largely 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00069434132908573<>ScoreDetail__5468|IGFALS|0.000360161352285824__11179|SOD1|0.00069434132908573__ 0 0 0 0 0 105595 16737688 136277 20996 11179 SOD1 ALS ALS 1 3.2 In ALS both the upper (UMN) UMN and the lower motor neurons 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00069434132908573<>ScoreDetail__5468|IGFALS|0.000360161352285824__11179|SOD1|0.00069434132908573__ 0 0 0 0 0 105596 16737688 136277 11901 6637 LMNB1 LMN LMN 11 0.0 the upper (UMN) UMN and the lower motor neurons (LMN) LMN degenerate leading to progressive muscle weakness atrophy and finally complete 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 105597 16737688 136278 20996 11179 SOD1 ALS ALS 0 3.2 ALS occurs in sporadic (SALS) SALS and familial forms (FALS) FALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00069434132908573<>ScoreDetail__5468|IGFALS|0.000360161352285824__11179|SOD1|0.00069434132908573__ 0 0 0 0 0 105602 16737688 136283 20996 11179 SOD1 ALS ALS 19 3.2 causes a phenotype that closely mimics the neuropathological features of ALS ( Doble and Kennel 2000 Gurney et al. 1994 and 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00069434132908573<>ScoreDetail__5468|IGFALS|0.000360161352285824__11179|SOD1|0.00069434132908573__ 0 0 0 0 0 105603 16737688 136285 11901 6637 LMNB1 LMN LMNs 49 0.0 the neurodegenerative changes in SOD1-G93A transgenics are not confined to LMNs 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 105604 16737688 136286 21920 11646 TCFL5 CHA Cha 45 0.0 while deleterious metabolic changes were shown in the hippocampus ( Cha et al. 2000 the red nucleus ( Chung et al. 2 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 105605 16737688 136286 21920 11646 TCFL5 CHA Cha 62 0.0 red nucleus ( Chung et al. 2003b the cerebellum ( Cha et al. 2000 Chung et al. 2003b and Chung et 2 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 105606 16737688 136288 20996 11179 SOD1 ALS ALS 12 3.2 latter issue would provide insights in the ongoing debate if ALS is due to anterograde (_amp_#x201c;dying-forward_amp_#x201d;) _amp_#x201c dying-forward_amp_#x201d or retrograde (_amp_#x201c;dying-back_amp_#x201d;) 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00069434132908573<>ScoreDetail__5468|IGFALS|0.000360161352285824__11179|SOD1|0.00069434132908573__ 0 0 0 0 0 105607 16737688 136289 20996 11179 SOD1 ALS ALS 32 3.2 might be crucial for the progression of cell death in ALS ( Allan and Rothwell 2003 Czlonkowska et al. 2001 McGeer 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00069434132908573<>ScoreDetail__5468|IGFALS|0.000360161352285824__11179|SOD1|0.00069434132908573__ 0 0 0 0 0 105608 16737688 136290 20996 11179 SOD1 ALS ALS 2 3.2 In fact ALS patients exhibit severe inflammatory reactions in the spinal cord ( 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00069434132908573<>ScoreDetail__5468|IGFALS|0.000360161352285824__11179|SOD1|0.00069434132908573__ 0 0 0 0 0 105609 16737688 136292 20996 11179 SOD1 ALS ALS 38 3.2 and inflammatory changes in the CNS of the SOD1-G93A transgenic ALS model 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00069434132908573<>ScoreDetail__5468|IGFALS|0.000360161352285824__11179|SOD1|0.00069434132908573__ 0 0 0 0 0 105610 16737688 136293 20996 11179 SOD1 ALS ALS 28 3.2 for the development of more effective even curative therapies for ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00069434132908573<>ScoreDetail__5468|IGFALS|0.000360161352285824__11179|SOD1|0.00069434132908573__ 0 0 0 0 0 105619 16737688 136355 18175 9954 REL REL Rel 20 0.0 to a computer equipped with an image program (KS100 KS100 Rel 3.0 2 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 1 nf 105646 16737688 136445 10734 6152 ITGAX CD11c CD11c-positive 1 1.9 Likewise CD11c-positive cells emerged first in the spinal cord ( Fig 6 1 JUMiner_v2.2 1 2 32 0 0 0 0 0 0 0 0 105647 16737688 136450 20996 11179 SOD1 ALS ALS 24 3.2 reactions in the brain of a transgenic animal model of ALS the SOD1-G93A mouse 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00069434132908573<>ScoreDetail__5468|IGFALS|0.000360161352285824__11179|SOD1|0.00069434132908573__ 0 0 0 0 0 105648 16737688 136470 20996 11179 SOD1 ALS ALS 50 3.2 Gurney 1994 and strikingly similar to those seen in human ALS ( Okamoto et al. 1990 and Takahashi et al. 1997 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00069434132908573<>ScoreDetail__5468|IGFALS|0.000360161352285824__11179|SOD1|0.00069434132908573__ 0 0 0 0 0 105649 16737688 136479 20996 11179 SOD1 ALS ALS 14 3.2 animal model substantial degenerative changes in the cerebral cortex of ALS patients are well known ( Kiernan and Hudson 1991 Lloyd 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00069434132908573<>ScoreDetail__5468|IGFALS|0.000360161352285824__11179|SOD1|0.00069434132908573__ 0 0 0 0 0 105651 16737688 136480 20996 11179 SOD1 ALS ALS 12 3.2 close similarities between the histopathology of transgenic SOD1 mice and ALS the experimental model departs from the human disease in an 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00069434132908573<>ScoreDetail__5468|IGFALS|0.000360161352285824__11179|SOD1|0.00069434132908573__ 0 0 0 0 0 105652 16737688 136484 20996 11179 SOD1 ALS ALS 27 3.2 (_amp_#x201c;dying-back_amp_#x201d;) _amp_#x201c dying-back_amp_#x201d degeneration ( Eisen and Weber 2001 in ALS patients 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00069434132908573<>ScoreDetail__5468|IGFALS|0.000360161352285824__11179|SOD1|0.00069434132908573__ 0 0 0 0 0 105653 16737688 136491 20996 11179 SOD1 ALS ALS-affected 20 3.2 and astrocyte activation in the brain as described for the ALS-affected spinal cord ( Alexianu et al. 2001 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00069434132908573<>ScoreDetail__5468|IGFALS|0.000360161352285824__11179|SOD1|0.00069434132908573__ 0 0 0 0 0 105654 16737688 136495 10734 6152 ITGAX CD11c CD11c 13 1.9 our study was the infiltration of single T-lymphocytes and CD11c(+) CD11c cells in brain regions that were most heavily degenerated like 1 JUMiner_v2.2 1 2 32 0 0 0 0 0 0 0 0 105657 16737688 136498 10734 6152 ITGAX CD11c CD11c 2 1.9 Since the CD11c(+) CD11c cells that appeared in late-stage SOD1-G93A transgenics (i) i were 1 JUMiner_v2.2 1 2 32 0 0 0 0 0 0 0 0 105658 16737688 136501 20996 11179 SOD1 ALS ALS 6 3.2 (2004) 2004 in the spinal cord of ALS patients and that of Henkel et al 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00069434132908573<>ScoreDetail__5468|IGFALS|0.000360161352285824__11179|SOD1|0.00069434132908573__ 0 0 0 0 0 105659 16737688 136506 20996 11179 SOD1 ALS ALS 38 3.2 and Reichmann 2001 and Serafini et al. 2000 in the ALS transgenics we found some dendritic cells and single T-lymphocytes after 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00069434132908573<>ScoreDetail__5468|IGFALS|0.000360161352285824__11179|SOD1|0.00069434132908573__ 0 0 0 0 0 105660 16737688 136509 20996 11179 SOD1 ALS ALS 15 3.2 specify the role of inflammatory reactions in the neurodegeneration in ALS the strong immune activation in the brain suggests that inflammatory 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00069434132908573<>ScoreDetail__5468|IGFALS|0.000360161352285824__11179|SOD1|0.00069434132908573__ 0 0 0 0 0 105661 16737688 136509 20996 11179 SOD1 ALS ALS 40 3.2 an important role in spinal cord but also in brain ALS pathology 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00069434132908573<>ScoreDetail__5468|IGFALS|0.000360161352285824__11179|SOD1|0.00069434132908573__ 0 0 0 0 0 105852 16753239 137026 20996 11179 SOD1 ALS ALS 34 0.9 (AD), AD Parkinson's disease (PD), PD amyotrophic lateral sclerosis (ALS), ALS and stroke 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000580796516805404<>ScoreDetail__5468|IGFALS|0.000384737206593143__11179|SOD1|0.000580796516805404__ 0 0 0 0 0 105897 16753239 137090 16440 8884 PGA PGA PGA 1 0.3 Interestingly PGA 2 which like 15d-PGJ 2 is a cyclopentenone prostaglandin but 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 105985 16753239 137152 22088 15934 TH1L TH1 Th1 29 0.0 and passive EAE presumably by suppressing IL-12 expression and associated Th1 cell differentiation 2 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 105995 16753239 137165 22088 15934 TH1L TH1 Th1 27 0.0 differentiation of T lymphocytes toward the T helper 1 (Th1) Th1 phenotype 2 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 105997 16753239 137168 22088 15934 TH1L TH1 Th1 19 0.0 progression by inhibiting IL-12 production by microglia which may inhibit Th1 cell differentiation 2 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 106002 16753239 137169 872 583 APC APC APCs 5 0.0 In addition antigen presenting cells (APCs) APCs including microglia can produce co-stimulatory molecules including CD40 CD80 and 13 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 106009 16753239 137170 872 583 APC APC APCs 5 0.0 Interaction of co-stimulatory molecules on APCs with their cognate receptors plays a critical role in the 13 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 106021 16753239 137187 16343 17468 PDLIM5 LIM Lim 21 0.3 in animal models of AD ( Heneka et al. 2005 Lim et al. 2000 and Yan et al. 2003 2 JUMiner_v2.2 1 2 34 0 0 0 0 0 0 0 0 106022 16753239 137188 16343 17468 PDLIM5 LIM Lim 0 0.3 Lim et al 2 JUMiner_v2.2 1 2 34 0 0 0 0 0 0 0 0 106026 16753239 137190 16343 17468 PDLIM5 LIM Lim 15 0.3 animal model of AD corroborated the in vivo observations of Lim et al 2 JUMiner_v2.2 1 2 34 0 0 0 0 0 0 0 0 106031 16753239 137204 20996 11179 SOD1 ALS ALS 0 0.9 ALS is a fatal neurodegenerative disorder characterized by loss of motor 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000580796516805404<>ScoreDetail__5468|IGFALS|0.000384737206593143__11179|SOD1|0.000580796516805404__ 0 0 0 0 0 106033 16753239 137206 20996 11179 SOD1 ALS ALS 28 0.9 of superoxide dismutase-1 G93A transgenic mice an animal model of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000580796516805404<>ScoreDetail__5468|IGFALS|0.000384737206593143__11179|SOD1|0.000580796516805404__ 0 0 0 0 0 106046 16753239 137232 20996 11179 SOD1 ALS ALS 26 0.9 neuroinflammatory and neurodegenerative disorders including MS Alzheimer's disease Parkinson's disease ALS and stroke 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000580796516805404<>ScoreDetail__5468|IGFALS|0.000384737206593143__11179|SOD1|0.000580796516805404__ 0 0 0 0 0 106631 16766086 138231 9947 5468 IGFALS ALS ALS 34 0.3 stroke multiple sclerosis Parkinson's disease and amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00131806371756415<>ScoreDetail__5468|IGFALS|0.000444303395747382__11179|SOD1|0.00131806371756415__ 0 0 0 0 0 106639 16766086 138260 8569 16769 GORASP1 p65 p65 10 0.0 PPAR_amp_#x3b3 has also been shown to physically interact with the p65 subunit of NF_amp_#x3ba B blocking its ability to interact with 1 JUMiner_v2.2 1 0 0 2 16769 TotalCon:2<>16769|GORASP1|64689|Complete__11509|SYT1|6857|Complete__<>AvaiableGeneRif=2<>BEST:16769|GORASP1|0.000319481375234203<>ScoreDetail__16769|GORASP1|0.000319481375234203__11509|SYT1|0.000190114660956994__ 0 0 0 0 0 106646 16766086 138301 16343 17468 PDLIM5 LIM Lim 19 0.3 burden and reduce inflammation in animal models of AD ( Lim et al. 2000 and Lim et al. 2001 2 JUMiner_v2.2 1 2 34 0 0 0 0 0 0 0 0 106647 16766086 138301 16343 17468 PDLIM5 LIM Lim 24 0.3 animal models of AD ( Lim et al. 2000 and Lim et al. 2001 2 JUMiner_v2.2 1 2 34 0 0 0 0 0 0 0 0 106662 16766086 138415 9947 5468 IGFALS ALS ALS 3 0.3 Amyotrophic lateral sclerosis (ALS) ALS is a fatal late onset and progressive neurodegenerative disease 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00131806371756415<>ScoreDetail__5468|IGFALS|0.000444303395747382__11179|SOD1|0.00131806371756415__ 0 0 0 0 0 106663 16766086 138418 9947 5468 IGFALS ALS ALS 3 0.3 Animal models of ALS recapitulate the neuronal loss and glial activation that are central 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00131806371756415<>ScoreDetail__5468|IGFALS|0.000444303395747382__11179|SOD1|0.00131806371756415__ 0 0 0 0 0 106664 16766086 138419 9947 5468 IGFALS ALS ALS 18 0.3 the PPAR_amp_#x3b3 agonist pioglitazone in two different murine models of ALS ( Kiaei et al. 2005 and Schutz et al. 2005 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00131806371756415<>ScoreDetail__5468|IGFALS|0.000444303395747382__11179|SOD1|0.00131806371756415__ 0 0 0 0 0 106665 16766086 138421 9947 5468 IGFALS ALS ALS 6 0.3 Oral administration of pioglitazone to transgenic ALS mice resulted in a significant delay in loss of motor 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00131806371756415<>ScoreDetail__5468|IGFALS|0.000444303395747382__11179|SOD1|0.00131806371756415__ 0 0 0 0 0 107876 16781706 139905 20996 11179 SOD1 ALS ALS 6 2.4 Effective treatment for amyotrophic lateral sclerosis (ALS) ALS remains elusive 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00123539212442415<>ScoreDetail__5468|IGFALS|0.000334317713266841__11179|SOD1|0.00123539212442415__ 0 0 0 0 0 107877 16781706 139906 20996 11179 SOD1 ALS ALS 8 2.4 Motor neuron degeneration is the primary pathology in ALS however non-neuronal cells contribute to the disease process 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00123539212442415<>ScoreDetail__5468|IGFALS|0.000334317713266841__11179|SOD1|0.00123539212442415__ 0 0 0 0 0 107878 16781706 139909 20996 11179 SOD1 ALS ALS 23 2.4 disease progression when administered after onset of signs in an ALS mouse model (hSOD1 hSOD1 G93A transgenic mice 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00123539212442415<>ScoreDetail__5468|IGFALS|0.000334317713266841__11179|SOD1|0.00123539212442415__ 0 0 0 0 0 107880 16781706 139911 20996 11179 SOD1 ALS ALS 3 2.4 Three conditions of ALS the loss of motor function paralysis scoring and weight loss 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00123539212442415<>ScoreDetail__5468|IGFALS|0.000334317713266841__11179|SOD1|0.00123539212442415__ 0 0 0 0 0 107881 16781706 139916 20996 11179 SOD1 ALS ALS 25 2.4 the basis for developing new drugs for the treatment of ALS and other chronic neurodegenerative diseases 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00123539212442415<>ScoreDetail__5468|IGFALS|0.000334317713266841__11179|SOD1|0.00123539212442415__ 0 0 0 0 0 107882 16781706 139919 20996 11179 SOD1 ALS ALS 3 2.4 Amyotrophic lateral sclerosis (ALS) ALS is the third most common neurodegenerative cause of adult death 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00123539212442415<>ScoreDetail__5468|IGFALS|0.000334317713266841__11179|SOD1|0.00123539212442415__ 0 0 0 0 0 107883 16781706 139920 20996 11179 SOD1 ALS ALS 0 2.4 ALS results in the degeneration of motor neurons in the cortex 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00123539212442415<>ScoreDetail__5468|IGFALS|0.000334317713266841__11179|SOD1|0.00123539212442415__ 0 0 0 0 0 107884 16781706 139921 20996 11179 SOD1 ALS ALS 3 2.4 Most causes of ALS are presently unknown and several mechanisms of insult to motor 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00123539212442415<>ScoreDetail__5468|IGFALS|0.000334317713266841__11179|SOD1|0.00123539212442415__ 0 0 0 0 0 107885 16781706 139923 6111 19199 DPPA3 Stella Stella 27 1.3 and neuroinflammation ( Carter and Rosen 2001 Pertwee 1999 and Stella 2004 ( Panikashvili et al. 2001 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 107886 16781706 139924 20996 11179 SOD1 ALS ALS 43 2.4 _amp_#x394 9 -THC slows progression and improves survival in the ALS mouse model ( hSOD1 G93A transgenic mice even when administered 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00123539212442415<>ScoreDetail__5468|IGFALS|0.000334317713266841__11179|SOD1|0.00123539212442415__ 0 0 0 0 0 107888 16781706 139924 24058 12731 WAS THC THC 9 0.0 We have previously shown that the cannabinoid _amp_#x394 9 -THC (delta-9-tetrahydrocannabinol, delta-9-tetrahydrocannabinol which acts on cannabinoid CB 1 and CB 11 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 107889 16781706 139924 24058 12731 WAS THC THC 35 0.0 oxidative damage in spinal cord cultures and that _amp_#x394 9 -THC slows progression and improves survival in the ALS mouse model 11 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 107892 16781706 139928 20996 11179 SOD1 ALS ALS 16 2.4 are the primary cause of up to 20% of familial ALS cases ( Rosen et al. 1993 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00123539212442415<>ScoreDetail__5468|IGFALS|0.000334317713266841__11179|SOD1|0.00123539212442415__ 0 0 0 0 0 107895 16781706 139930 20996 11179 SOD1 ALS ALS 21 2.4 similar to patients with familial and some forms of sporadic ALS ( Bruijn et al. 1997 Gurney et al. 1994 and 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00123539212442415<>ScoreDetail__5468|IGFALS|0.000334317713266841__11179|SOD1|0.00123539212442415__ 0 0 0 0 0 107897 16781706 139931 20996 11179 SOD1 ALS ALS 13 2.4 mice are used for preclinical testing of compounds for treating ALS since the disease in these animals follows a consistent onset 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00123539212442415<>ScoreDetail__5468|IGFALS|0.000334317713266841__11179|SOD1|0.00123539212442415__ 0 0 0 0 0 107898 16781706 139931 20996 11179 SOD1 ALS ALS 30 2.4 follows a consistent onset progression and outcome that mimics human ALS ( Gurney et al. 1996 Klivenyi et al. 1999 and 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00123539212442415<>ScoreDetail__5468|IGFALS|0.000334317713266841__11179|SOD1|0.00123539212442415__ 0 0 0 0 0 107904 16781706 139972 12428 6923 MBNL1 EXP exp 0 0.0 Time=7(1+exp((Age_amp_#x2212; Time=7 1 exp Age_amp_#x2212 A )/ B _amp_#x2212 1 14 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 107907 16781706 139997 20996 11179 SOD1 ALS ALS 25 2.4 reversing the sexual dimorphism normally seen in this strain of ALS mice ( Trieu and Uckun 1999 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00123539212442415<>ScoreDetail__5468|IGFALS|0.000334317713266841__11179|SOD1|0.00123539212442415__ 0 0 0 0 0 107909 16781706 140000 24058 12731 WAS THC THC 19 0.0 AM1241 may extend survival as was observed with _amp_#x394 9 -THC treatment where treatment with 5_amp_#xa0;mg/kg 5_amp_#xa0 mg kg did not 11 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 108709 16793728 140884 13686 7321 MSC MSC MSC 7 0.3 On the other hand mesenchymal stem cells (MSC) MSC from adult BM implanted in injured areas recover the morphology 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>7321|MSC|9242|Complete__29786|SLC25A37|51312|No_GeneRif__<>AvaiableGeneRif=1<> 1 1 0 0 0 108710 16793728 140885 13686 7321 MSC MSC MSC 20 0.3 is a direct relationship between anti-nervous tissue T cells and MSC reparatory properties 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>7321|MSC|9242|Complete__29786|SLC25A37|51312|No_GeneRif__<>AvaiableGeneRif=1<> 1 1 0 0 0 108711 16793728 140887 13686 7321 MSC MSC MSC 6 0.3 These cells were cocultured with autologous MSC for 2-15 days 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>7321|MSC|9242|Complete__29786|SLC25A37|51312|No_GeneRif__<>AvaiableGeneRif=1<> 1 1 0 0 0 108712 16793728 140889 13686 7321 MSC MSC MSC 6 0.3 RESULTS After 48 h of coculture MSC adopted a spindle shape with polarization of the cytoplasm that 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>7321|MSC|9242|Complete__29786|SLC25A37|51312|No_GeneRif__<>AvaiableGeneRif=1<> 1 1 0 0 0 108714 16793728 140895 13686 7321 MSC MSC MSC 11 0.3 We observed that autoreactive cells may induce the transdifferentiation of MSC to neural stem cells 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>7321|MSC|9242|Complete__29786|SLC25A37|51312|No_GeneRif__<>AvaiableGeneRif=1<> 1 1 0 0 0 100194 16877542 128986 18723 10261 ROS1 ROS ROS 4 0.0 In Situ Visualization of ROS 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 100195 16877542 128991 6327 15531 EBNA1BP2 P40 P-40 9 0.3 Supernatants of mouse spinal cord tissue homogenized in Nonidet P-40 buffer containing 50 mM DTT were collected and incubated (at 11 JUMiner_v2.2 1 2 nonidet 0 2 6871 TotalCon:9<>682|ARHGEF2|9181|Complete__15531|EBNA1BP2|10969|Complete__9565|PSMD7|5713|Complete__6029|IL9|3578|Complete__6508|LANCL1|10314|No_GeneRif__6502|RPSA|3921|Complete__6871|MAPK1|5594|Complete__16896|RABEPK|10244|Complete__15979|TP63|8626|Complete__<>AvaiableGeneRif=8<>BEST:6871|MAPK1|0.000752624094504684<>ScoreDetail__15979|TP63|0.000496127774993406__16896|RABEPK|0.000101282916948008__6502|RPSA|0.000521222028738287__15531|EBNA1BP2|0.000738701616486897__682|ARHGEF2|0.000595108664553268__9565|PSMD7|0.000248157574288567__6029|IL9|0.000644004922037618__6871|MAPK1|0.000752624094504684__ 0 0 0 0 0 100207 16877542 129018 3884 1659 CD33 p67 p67 4 0.0 The levels of the p67 phox subunit that contains the NADPH-binding site of the NADPH 1 JUMiner_v2.2 1 0 0 2 1659 TotalCon:2<>1659|CD33|945|Complete__16672|METAP2|10988|Complete__<>AvaiableGeneRif=2<>BEST:1659|CD33|0.000776415125613499<>ScoreDetail__1659|CD33|0.000776415125613499__16672|METAP2|0.000718318559914951__ 0 0 0 0 0 100211 16877542 129024 18723 10261 ROS1 ROS ROS 20 0.0 in transgenic SOD1 G93A mice by probing for formation of ROS and evidence of protein oxidation 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 100212 16877542 129025 18723 10261 ROS1 ROS ROS 7 0.0 In nontransgenic mice spinal cord production of ROS evidenced by the fluorescence emitted by ethidium the oxidation product 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 100272 16877542 129061 18723 10261 ROS1 ROS ROS 1 0.0 Microglial-Derived ROS Recapitulate the IGF1/Akt IGF1 Akt Pathway Defect in Vitro 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 100275 16877542 129062 18723 10261 ROS1 ROS ROS 7 0.0 To test the idea that NADPH oxidase-derived ROS could impair IGF1 pathway function an in vitro cell system 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 100295 16877542 129074 18723 10261 ROS1 ROS ROS 40 0.0 morphology of resting microglia and did not seem to produce ROS ( Figs 1 and 6 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 100306 16877542 129079 18723 10261 ROS1 ROS ROS 24 0.0 in transgenic SOD1 G93A mice eliminates the production of microglial-derived ROS ( Fig 1 M and importantly prolongs survival and retards 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 100317 16877542 129085 18723 10261 ROS1 ROS ROS 28 0.0 their plasma membrane proteins and lipids damaged by NADPH oxidase-derived ROS 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 100321 16877542 129088 18723 10261 ROS1 ROS ROS 6 0.0 First at that lower level of ROS production oxidative stress may not kill cells but instead may 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 100332 16877542 129095 18723 10261 ROS1 ROS ROS 39 0.0 receptor including autophosphorylation and Akt phosphorylation were indeed abated by ROS in a microglial NADPH oxidase-dependent manner 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 100357 16877542 129124 18723 10261 ROS1 ROS ROS 8 0.0 Modulation of the IGF1/Akt IGF1 Akt pathway by NADPH oxidase-derived ROS 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 100361 16877542 129128 18723 10261 ROS1 ROS ROS 4 0.0 Glucose oxidase- and microglial-derived ROS impair the IGF1 Akt pathway in vitro 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 100367 16877542 129130 18723 10261 ROS1 ROS ROS 0 0.0 ROS reactive oxygen species SOD1 superoxide dismutase 1 IGF1 insulin-like growth 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 100376 16877542 129138 18723 10261 ROS1 ROS ROS 12 0.0 mediators that could promote neurodegeneration are reactive oxygen species (ROS) ROS produced by the enzyme NADPH oxidase complex ( 7 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 100377 16877542 129139 18723 10261 ROS1 ROS ROS-generating 2 0.0 Although this ROS-generating multimeric oxidase is indispensable for protecting the host against invading 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 100380 16877542 129143 18723 10261 ROS1 ROS ROS-generating 29 0.0 provide compelling evidence that supports the concept that this microglial ROS-generating enzymatic complex promotes spinal cord motor neuron degeneration by a 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 101191 16883679 129641 9947 5468 IGFALS ALS ALS 3 0.3 Amyotrophic lateral sclerosis (ALS) ALS and asthma are inflammatory diseases 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000996190392783641<>ScoreDetail__5468|IGFALS|0.000133523233042549__11179|SOD1|0.000996190392783641__ 0 0 0 0 0 101192 16883679 129642 9947 5468 IGFALS ALS ALS 0 0.3 ALS is a fatal progressive neurodegenerative disease with inflammation around the 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000996190392783641<>ScoreDetail__5468|IGFALS|0.000133523233042549__11179|SOD1|0.000996190392783641__ 0 0 0 0 0 101193 16883679 129645 9947 5468 IGFALS ALS ALS 6 0.3 While there is no cure for ALS asthma is managed according to its symptoms and severity to 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000996190392783641<>ScoreDetail__5468|IGFALS|0.000133523233042549__11179|SOD1|0.000996190392783641__ 0 0 0 0 0 101194 16883679 129646 9947 5468 IGFALS ALS ALS 14 0.3 asthma may provide insights into how to clinically deal with ALS the authors examined the etiologies of ALS and asthma and 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000996190392783641<>ScoreDetail__5468|IGFALS|0.000133523233042549__11179|SOD1|0.000996190392783641__ 0 0 0 0 0 101195 16883679 129646 9947 5468 IGFALS ALS ALS 21 0.3 clinically deal with ALS the authors examined the etiologies of ALS and asthma and the factors that exacerbate the symptoms 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000996190392783641<>ScoreDetail__5468|IGFALS|0.000133523233042549__11179|SOD1|0.000996190392783641__ 0 0 0 0 0 101966 16909005 130926 20996 11179 SOD1 ALS ALS 29 1.7 G93A SOD1 transgenic mouse model of amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00156629799558186<>ScoreDetail__5468|IGFALS|0.000360457781382356__11179|SOD1|0.00156629799558186__ 0 0 0 0 0 101969 16909005 130930 20996 11179 SOD1 ALS ALS 13 1.7 improved weight loss motor performance and delayed the onset of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00156629799558186<>ScoreDetail__5468|IGFALS|0.000360457781382356__11179|SOD1|0.00156629799558186__ 0 0 0 0 0 101977 16909005 130936 20996 11179 SOD1 ALS ALS 28 1.7 be a promising therapeutic candidate for the treatment of human ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00156629799558186<>ScoreDetail__5468|IGFALS|0.000360457781382356__11179|SOD1|0.00156629799558186__ 0 0 0 0 0 102045 16909020 130991 9947 5468 IGFALS ALS ALS 21 0.3 of selective motor neuron degeneration in amyotrophic lateral sclerosis (ALS) ALS remains unsolved 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000907283918953578<>ScoreDetail__5468|IGFALS|0__11179|SOD1|0.000907283918953578__ 0 0 0 0 0 102046 16909020 130994 9947 5468 IGFALS ALS ALS 7 0.3 This multitude of contributing factors indicates that ALS is a complex disease and also suggests that ALS is 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000907283918953578<>ScoreDetail__5468|IGFALS|0__11179|SOD1|0.000907283918953578__ 0 0 0 0 0 102047 16909020 130994 9947 5468 IGFALS ALS ALS 16 0.3 that ALS is a complex disease and also suggests that ALS is a multifactorial disorder 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000907283918953578<>ScoreDetail__5468|IGFALS|0__11179|SOD1|0.000907283918953578__ 0 0 0 0 0 102048 16909020 130995 9947 5468 IGFALS ALS ALS 11 0.3 is not the newest and most spectacular hypothesis in the ALS field but it is undoubtedly one of the most robust 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000907283918953578<>ScoreDetail__5468|IGFALS|0__11179|SOD1|0.000907283918953578__ 0 0 0 0 0 102049 16909020 130996 9947 5468 IGFALS ALS ALS 15 0.3 riluzole the only drug proven to slow disease progression in ALS is most likely related to its anti-excitotoxic properties 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000907283918953578<>ScoreDetail__5468|IGFALS|0__11179|SOD1|0.000907283918953578__ 0 0 0 0 0 102050 16909020 130997 9947 5468 IGFALS ALS ALS 19 0.3 the arguments in favor of the involvement of excitotoxicity in ALS and of the possible mechanisms leading to motor neuron death 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000907283918953578<>ScoreDetail__5468|IGFALS|0__11179|SOD1|0.000907283918953578__ 0 0 0 0 0 102051 16909020 130998 9947 5468 IGFALS ALS ALS 28 0.3 and could explain the selective vulnerability of motor neurons in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000907283918953578<>ScoreDetail__5468|IGFALS|0__11179|SOD1|0.000907283918953578__ 0 0 0 0 0 102064 16909022 131018 20996 11179 SOD1 ALS ALS 4 1.2 In amyotrophic lateral sclerosis (ALS) ALS degeneration of motor neurons is associated with a chronic and 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00121547330976728<>ScoreDetail__5468|IGFALS|0.000714059028879721__11179|SOD1|0.00121547330976728__ 0 0 0 0 0 102065 16909022 131019 20996 11179 SOD1 ALS ALS 10 1.2 There is emerging evidence that the KP is important in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00121547330976728<>ScoreDetail__5468|IGFALS|0.000714059028879721__11179|SOD1|0.00121547330976728__ 0 0 0 0 0 102066 16909022 131020 20996 11179 SOD1 ALS ALS 13 1.2 that QUIN is significantly increased in serum and CSF of ALS patients 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00121547330976728<>ScoreDetail__5468|IGFALS|0.000714059028879721__11179|SOD1|0.00121547330976728__ 0 0 0 0 0 102067 16909022 131020 11629 6493 LAMC2 CSF CSF 11 0.1 we demonstrated that QUIN is significantly increased in serum and CSF of ALS patients 6 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 102068 16909022 131021 20996 11179 SOD1 ALS ALS 12 1.2 of the factors associated with QUIN toxicity are found in ALS implying that QUIN may play a substantial role in the 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00121547330976728<>ScoreDetail__5468|IGFALS|0.000714059028879721__11179|SOD1|0.00121547330976728__ 0 0 0 0 0 102069 16909022 131021 20996 11179 SOD1 ALS ALS 25 1.2 QUIN may play a substantial role in the neuropathogenesis of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00121547330976728<>ScoreDetail__5468|IGFALS|0.000714059028879721__11179|SOD1|0.00121547330976728__ 0 0 0 0 0 102070 16909022 131022 20996 11179 SOD1 ALS ALS 10 1.2 This review details the potential role the KP has in ALS and advances a testable hypothetical model 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00121547330976728<>ScoreDetail__5468|IGFALS|0.000714059028879721__11179|SOD1|0.00121547330976728__ 0 0 0 0 0 93459 16983747 120732 20996 11179 SOD1 ALS ALS 17 0.0 destruction Parkinson's disease (PD), PD one of dopaminergic neuron depletion ALS a disease of motor neuron death and Alzheimer's a disease 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000898762119587972<>ScoreDetail__5468|IGFALS|0.000187160771102377__11179|SOD1|0.000898762119587972__ 0 0 0 0 0 94200 17008387 122180 20996 11179 SOD1 ALS ALS 12 2.2 oxidative damage are also hallmarks of amyotrophic lateral sclerosis (ALS), ALS we studied the effect of oral PDTC treatment on G93A-superoxide 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00109824346808189<>ScoreDetail__5468|IGFALS|0.000396780834737039__11179|SOD1|0.00109824346808189__ 0 0 0 0 0 94202 17008387 122180 20996 11179 SOD1 ALS ALS 32 2.2 1 (SOD1) SOD1 transgenic (TG) TG rat model of human ALS and observed that PDTC treatment significantly decreases the survival 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00109824346808189<>ScoreDetail__5468|IGFALS|0.000396780834737039__11179|SOD1|0.00109824346808189__ 0 0 0 0 0 94207 17008387 122189 20996 11179 SOD1 ALS ALS 3 2.2 Amyotrophic lateral sclerosis (ALS) ALS is a late-onset motor neuron degenerative disease of the spinal 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00109824346808189<>ScoreDetail__5468|IGFALS|0.000396780834737039__11179|SOD1|0.00109824346808189__ 0 0 0 0 0 94208 17008387 122190 20996 11179 SOD1 ALS ALS 3 2.2 The patients with ALS typically become progressively paralyzed and respiratory failure eventually leads to 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00109824346808189<>ScoreDetail__5468|IGFALS|0.000396780834737039__11179|SOD1|0.00109824346808189__ 0 0 0 0 0 94209 17008387 122190 20996 11179 SOD1 ALS ALS 31 2.2 et al. 1986 kappaB accompany motor neuron degeneration either in ALS or SOD1 mutant mice (Migheli Migheli et al. 1997 Tortarolo 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00109824346808189<>ScoreDetail__5468|IGFALS|0.000396780834737039__11179|SOD1|0.00109824346808189__ 0 0 0 0 0 94211 17008387 122191 20996 11179 SOD1 ALS ALS 10 2.2 Moreover expression of several proinflammatory mediators is increased both in ALS and SOD1 mutant mice (Alexianu Alexianu et al. 2001 Elliott 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00109824346808189<>ScoreDetail__5468|IGFALS|0.000396780834737039__11179|SOD1|0.00109824346808189__ 0 0 0 0 0 94215 17008387 122192 20996 11179 SOD1 ALS ALS 51 2.2 interplay between glia and motor neurons is required for the ALS pathogenesis 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00109824346808189<>ScoreDetail__5468|IGFALS|0.000396780834737039__11179|SOD1|0.00109824346808189__ 0 0 0 0 0 94216 17008387 122193 20996 11179 SOD1 ALS ALS 14 2.2 and even apoptosis play major roles in the pathology of ALS we decided to test the effect of PDTC treatment on 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00109824346808189<>ScoreDetail__5468|IGFALS|0.000396780834737039__11179|SOD1|0.00109824346808189__ 0 0 0 0 0 94217 17008387 122195 20996 11179 SOD1 ALS ALS 25 2.2 of immunoproteasome suggesting that immunoproteasome is a beneficial response in ALS to cope with accumulating protein aggregates 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00109824346808189<>ScoreDetail__5468|IGFALS|0.000396780834737039__11179|SOD1|0.00109824346808189__ 0 0 0 0 0 94218 17008387 122197 20996 11179 SOD1 ALS ALS 3 2.2 PDTC Treatment of ALS Rats 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00109824346808189<>ScoreDetail__5468|IGFALS|0.000396780834737039__11179|SOD1|0.00109824346808189__ 0 0 0 0 0 94219 17008387 122224 19573 10691 SDS SDS SDS-polyacrylamide 8 0.0 Cytosolic proteins were separated by 10% or 12% SDS-polyacrylamide gel electrophoresis on Mini-Protean III electrophoresis device (Bio-Rad) Bio-Rad 11 JUMiner_v2.2 1 0 0 2 19440 TotalCon:2<>10691|SDS|10993|Complete__19440|SBDS|51119|Complete__<>AvaiableGeneRif=2<>BEST:19440|SBDS|0.000221988138576096<>ScoreDetail__10691|SDS|7.57747973024172e-05__19440|SBDS|0.000221988138576096__ 0 0 0 0 0 94221 17008387 122229 20996 11179 SOD1 ALS ALS 70 2.2 _amp_#177 4 days and vehicle-treated (11 11 _amp_#177 3 days ALS rats ( Fig 1 C and D 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00109824346808189<>ScoreDetail__5468|IGFALS|0.000396780834737039__11179|SOD1|0.00109824346808189__ 0 0 0 0 0 94228 17008387 122238 20996 11179 SOD1 ALS ALS 23 2.2 a potential therapeutic target verified in numerous animal studies of ALS (Gurney Gurney et al. 1996 Howland et al. 2002 and 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00109824346808189<>ScoreDetail__5468|IGFALS|0.000396780834737039__11179|SOD1|0.00109824346808189__ 0 0 0 0 0 94229 17008387 122239 20996 11179 SOD1 ALS ALS 8 2.2 In agreement with the previous studies on mouse ALS models (Cheroni Cheroni et al. 2005 beta1 beta2 and beta5 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00109824346808189<>ScoreDetail__5468|IGFALS|0.000396780834737039__11179|SOD1|0.00109824346808189__ 0 0 0 0 0 94234 17008387 122242 20996 11179 SOD1 ALS ALS 43 2.2 which have been reported to be neuroprotective in models of ALS by increasing expression of glutamate transporter GLT-1 (Rothstein Rothstein et 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00109824346808189<>ScoreDetail__5468|IGFALS|0.000396780834737039__11179|SOD1|0.00109824346808189__ 0 0 0 0 0 94238 17008387 122242 20996 11179 SOD1 ALS ALS 107 2.2 induction of immunoproteasome may be a rather selective characteristic for ALS (models) models compared with models of ischemia trauma and amyloid-accumulating 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00109824346808189<>ScoreDetail__5468|IGFALS|0.000396780834737039__11179|SOD1|0.00109824346808189__ 0 0 0 0 0 94239 17008387 122242 20996 11179 SOD1 ALS ALS 123 2.2 ischemia trauma and amyloid-accumulating diseases inhibition of immunoproteasome alone in ALS models could increase the accumulation of ubiquitinated proteins including ubiquitinated 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00109824346808189<>ScoreDetail__5468|IGFALS|0.000396780834737039__11179|SOD1|0.00109824346808189__ 0 0 0 0 0 94245 17008387 122244 20996 11179 SOD1 ALS ALS 80 2.2 It is possible that in a long-term disease such as ALS NF-kappaB activity even though being induced is not maintained at 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00109824346808189<>ScoreDetail__5468|IGFALS|0.000396780834737039__11179|SOD1|0.00109824346808189__ 0 0 0 0 0 94250 17008387 122245 20996 11179 SOD1 ALS ALS 15 2.2 not provide evidence for a central role of NF-kappaB in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00109824346808189<>ScoreDetail__5468|IGFALS|0.000396780834737039__11179|SOD1|0.00109824346808189__ 0 0 0 0 0 94252 17008387 122246 20996 11179 SOD1 ALS ALS 35 2.2 be at least directly involved in neuronal survival in TG ALS models 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00109824346808189<>ScoreDetail__5468|IGFALS|0.000396780834737039__11179|SOD1|0.00109824346808189__ 0 0 0 0 0 94256 17008387 122250 20996 11179 SOD1 ALS ALS 38 2.2 mg kg is not beneficial in a TG model of ALS (L L van den Bosch T Ahtoniemi J Kolstinaho unpublished 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00109824346808189<>ScoreDetail__5468|IGFALS|0.000396780834737039__11179|SOD1|0.00109824346808189__ 0 0 0 0 0 94258 17008387 122251 20996 11179 SOD1 ALS ALS 17 2.2 the toxic consequences of mutant SOD1 in tissues affected by ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00109824346808189<>ScoreDetail__5468|IGFALS|0.000396780834737039__11179|SOD1|0.00109824346808189__ 0 0 0 0 0 94259 17008387 122253 20996 11179 SOD1 ALS ALS 3 2.2 PDTC treatment of ALS rats resulted in decreased survival 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00109824346808189<>ScoreDetail__5468|IGFALS|0.000396780834737039__11179|SOD1|0.00109824346808189__ 0 0 0 0 0 94286 17008387 122318 20996 11179 SOD1 ALS ALS 4 2.2 ABBREVIATIONS PDTC pyrrolidine dithiocarbamate ALS amyotrophic lateral sclerosis EMSA electrophoretic mobility shift assay NF-kappaB nuclear 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00109824346808189<>ScoreDetail__5468|IGFALS|0.000396780834737039__11179|SOD1|0.00109824346808189__ 0 0 0 0 0 81744 17015226 105755 20996 11179 SOD1 ALS ALS 32 4.8 the progressive late-onset motor neuron disease Amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81745 17015226 105758 20996 11179 SOD1 ALS ALS 29 4.8 4_amp_#x2013 6 per 100 000 respectively understates the impact of ALS with the lifetime risk at about 1 in 1000 ( 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81746 17015226 105759 20996 11179 SOD1 ALS ALS 4 4.8 Most incidences (90%) 90% of ALS are sporadic that is without an obvious genetic component 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81747 17015226 105760 20996 11179 SOD1 ALS ALS 13 4.8 in a dominant manner (and and referred to as familial ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81748 17015226 105761 20996 11179 SOD1 ALS ALS 3 4.8 Sporadic and familial ALS produce similar pathological hallmarks including progressive muscle weakness atrophy and 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81749 17015226 105765 20996 11179 SOD1 ALS ALS 2 4.8 Genetics of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81750 17015226 105766 20996 11179 SOD1 ALS ALS 3 4.8 Most incidences of ALS are sporadic but 10% of patients have a familial history 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81751 17015226 105767 20996 11179 SOD1 ALS ALS-like 9 4.2 The identified chromosomal loci containing the mutations leading to ALS-like human motor neuron diseases ( Table 1 have been defined 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81754 17015226 105767 20996 11179 SOD1 ALS ALS 28 4.8 have been defined as ALS1 through ALS8 as well as ALS with frontotemporal dementia (ALS-FTD) ALS-FTD and ALS-FTD coupled with Parkinson's 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81762 17015226 105770 20996 11179 SOD1 ALS ALS 10 4.8 ALS-FTD and ALS-FTDP are likely appropriately classified as bona fide ALS but patients have additional disease features including dementia and dystonia 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81769 17015226 105774 20996 11179 SOD1 ALS ALS 12 4.8 the SOD1 gene are the most common form of inherited ALS accounting for 20% of all the familial ALS forms and 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81770 17015226 105774 20996 11179 SOD1 ALS ALS 20 4.8 of inherited ALS accounting for 20% of all the familial ALS forms and corresponding to 1%_amp_#x2013 2% of all ALS cases 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81771 17015226 105774 20996 11179 SOD1 ALS ALS 28 4.8 familial ALS forms and corresponding to 1%_amp_#x2013 2% of all ALS cases 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81775 17015226 105778 20996 11179 SOD1 ALS ALS 5 4.8 Sporadic and SOD1 mutant-mediated familial ALS are clinically indistinguishable and affect the same neurons but even 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81779 17015226 105780 20996 11179 SOD1 ALS ALS 65 4.8 of our knowledge on mechanisms of motor neuron pathology in ALS is from studies using these models (see see below 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81782 17015226 105782 20996 11179 SOD1 ALS ALS 20 4.8 hypoxia-induced and tumor-induced angiogenesis gained interest as a contributor to ALS when deletion of the hypoxia response element (HRE) HRE in 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81784 17015226 105782 20996 11179 SOD1 ALS ALS-like 36 4.2 element (HRE) HRE in the murine VEGF promoter resulted in ALS-like disease in mice ( Oosthuyse et_amp_#xa0 al. 2001 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81786 17015226 105784 20996 11179 SOD1 ALS ALS 2 4.8 Screening of ALS patient DNAs in promoter regions of the VEGF gene including 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81789 17015226 105785 20996 11179 SOD1 ALS ALS 15 4.8 of the promoter however showed an increased risk of developing ALS in a Belgian Swedish and a British/Birmingham British Birmingham population 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81792 17015226 105787 20996 11179 SOD1 ALS ALS 8 4.8 Mutations in ANG have also been linked to ALS emphasizing a potential link between altered angiogenesis and motor neuron 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81793 17015226 105788 20996 11179 SOD1 ALS ALS 10 4.8 Seven missense mutations were identified in 15 patients with familial ALS and 11 apparently sporadic ALS patients ( Greenway et_amp_#xa0 al. 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81794 17015226 105788 20996 11179 SOD1 ALS ALS 15 4.8 in 15 patients with familial ALS and 11 apparently sporadic ALS patients ( Greenway et_amp_#xa0 al. 2006 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81795 17015226 105789 20996 11179 SOD1 ALS ALS-linked 26 4.2 English Swedish and North American populations and therefore suggest that ALS-linked ANG mutations are rare 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81797 17015226 105792 20996 11179 SOD1 ALS ALS 8 4.8 Interestingly the majority of the mutations found in ALS patients are located within the catalytic core and one of 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81800 17015226 105795 20996 11179 SOD1 ALS ALS 29 4.8 disease course with most instances of disease representing an atypical ALS that is accompanied by an unusual tremor ( Nishimura et_amp_#xa0 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81801 17015226 105796 20996 11179 SOD1 ALS ALS 25 4.8 and a small proportion of patients develop symptoms of classic ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81805 17015226 105800 20996 11179 SOD1 ALS ALS 14 4.8 three neurofilament subunits have long been suspected as causative for ALS because of their link with motor neuron pathology in mice 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81806 17015226 105801 20996 11179 SOD1 ALS ALS 21 4.8 accumulations are a pathological hallmark of both familial and sporadic ALS ( Hirano 1991 Hirano et_amp_#xa0 al. 1984a and Hirano et_amp_#xa0 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81807 17015226 105801 20996 11179 SOD1 ALS ALS 39 4.8 and Hirano et_amp_#xa0 al. 1984b and are also seen in ALS mice expressing mutant SOD1 ( Bruijn et_amp_#xa0 al. 1997 and 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81812 17015226 105803 20996 11179 SOD1 ALS ALS 24 4.8 failed to yield conclusive linkage to either sporadic or familial ALS patients ( Garcia et_amp_#xa0 al. 2006 although dominant point mutations 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81815 17015226 105804 20996 11179 SOD1 ALS ALS 30 4.8 the NF-H subunit have been reported in 1% of sporadic ALS patients ( Al-Chalabi et_amp_#xa0 al. 1999 Figlewicz et_amp_#xa0 al. 1994 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81816 17015226 105805 20996 11179 SOD1 ALS ALS 12 4.8 is likely that these neurofilament variants are risk factors for ALS and/or and or a primary event with low penetrance 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81817 17015226 105806 20996 11179 SOD1 ALS ALS 7 4.8 A final potential contribution of neurofilaments to ALS comes from errors in the expression of an additional intermediate 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81818 17015226 105807 20996 11179 SOD1 ALS ALS 10 4.8 An assembly-disrupting frameshift mutation has been reported in one sporadic ALS case ( Gros-Louis et_amp_#xa0 al. 2004 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81819 17015226 105808 20996 11179 SOD1 ALS ALS-causing 53 4.2 has no affect on disease course in mice having an ALS-causing SOD1 mutation ( Lariviere et_amp_#xa0 al. 2003 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81850 17015226 105823 20996 11179 SOD1 ALS ALS-like 22 4.2 hSOD1 Quad resulting in dismutase inactive SOD1 still develop typical ALS-like motor neuron disease ( Wang et_amp_#xa0 al. 2003 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81854 17015226 105825 20996 11179 SOD1 ALS ALS-Causing 7 4.2 Misfolded SOD1 as a Common Feature of ALS-Causing Mutations 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81855 17015226 105826 20996 11179 SOD1 ALS ALS 17 4.8 different neurodegenerative disorders including Alzheimer's Parkinson's and Huntington's diseases and ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81856 17015226 105827 20996 11179 SOD1 ALS ALS 10 4.8 Cytoplasmic protein aggregates are observed in both sporadic and familial ALS cases as well as in mutant SOD1 transgenic mice ( 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81864 17015226 105834 20996 11179 SOD1 ALS ALS-like 34 4.2 very aggressive disease course in humans neither induces aggregates nor ALS-like disease in mice except in the context of high levels 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81874 17015226 105842 20996 11179 SOD1 ALS ALS 3 4.8 Aggregates found in ALS patients as well as mouse models contain ubiquitin ( Ince 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81879 17015226 105850 20996 11179 SOD1 ALS ALS 6 4.8 In spinal cord extracts of presymptomatic ALS mice an overall decrease of chaperone activity has been reported 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81890 17015226 105853 20996 11179 SOD1 ALS ALS 29 4.8 al. 2003 which may contribute to their selective vulnerability in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81908 17015226 105861 20996 11179 SOD1 ALS ALS 10 4.8 Mitochondria were implicated as a possible target for toxicity in ALS by histopathological observations of vacuolated and dilated mitochondria with disorganized 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81909 17015226 105861 20996 11179 SOD1 ALS ALS 35 4.8 motor neurons (and and muscle of both sporadic and familial ALS patients ( Afifi et_amp_#xa0 al. 1966 Hirano et_amp_#xa0 al. 1984a 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81910 17015226 105862 18111 5724 RBPJ SUH Suh 30 0.6 respiration and increased levels of uncoupling proteins ( Chung and Suh 2002 Dupuis et_amp_#xa0 al. 2003 Echaniz-Laguna et_amp_#xa0 al. 2002 Vielhaber 2 JUMiner_v2.2 1 2 UserEdit 0 2 5724 TotalCon:2<>5724|RBPJ|3516|Complete__13761|RBPJL|11317|Complete__<>AvaiableGeneRif=2<>BEST:5724|RBPJ|0.00027587698614083<>ScoreDetail__5724|RBPJ|0.00027587698614083__13761|RBPJL|0.000145008887641501__ 1 1 0 0 0 81938 17015226 105895 20996 11179 SOD1 ALS ALS 52 4.8 Bcl-2 have been reported in spinal cord motor neurons of ALS patients ( Ekegren et_amp_#xa0 al. 1999 and Mu et_amp_#xa0 al. 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81950 17015226 105902 20996 11179 SOD1 ALS ALS 11 4.8 of the Neuromuscular Synapse as the First Cellular Phenotype in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81951 17015226 105904 20996 11179 SOD1 ALS ALS 11 4.8 to the muscle at the neuromuscular junction is lost in ALS mouse models long before motor neuron degeneration or death and 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81952 17015226 105905 20996 11179 SOD1 ALS ALS 43 4.8 5 _amp_#x3bc m myelinated axons that are selectively vulnerable in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81959 17015226 105912 20996 11179 SOD1 ALS ALS 8 4.8 Damage within the Axon Compromised Axonal Transport in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 81984 17015226 105930 20996 11179 SOD1 ALS ALS 4 4.8 Although progressive paralysis in ALS arises from degeneration and death of motor neurons evidence from 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82008 17015226 105955 20996 11179 SOD1 ALS ALS 1 4.8 In ALS microglial activation has been described in the brain and spinal 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82010 17015226 105957 20996 11179 SOD1 ALS ALS 22 4.8 the immune response have been reported in spinal cords of ALS patients and hSOD1 G93A mice during the disease course ( 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82012 17015226 105959 20996 11179 SOD1 ALS ALS 7 4.8 Minocycline was potent in increasing survival of ALS mice and reduced microglial activation ( Kriz et_amp_#xa0 al. 2002 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82013 17015226 105963 20996 11179 SOD1 ALS ALS 8 4.8 Either way supported by its beneficial effect in ALS mice minocycline has been proposed for clinical trial ( Gordon 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82016 17015226 105964 20996 11179 SOD1 ALS ALS 36 4.8 cytokines and COX-2 expression is induced in spinal cords of ALS patients ( Yasojima et_amp_#xa0 al. 2001 and Yiangou et_amp_#xa0 al. 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82018 17015226 105966 20996 11179 SOD1 ALS ALS 14 4.8 in a human trial failed to provide a benefit in ALS ( Cudkowicz et_amp_#xa0 al. 2006 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82019 17015226 105967 20996 11179 SOD1 ALS ALS 7 4.8 Additional evidence implicating microglia in pathogenesis of ALS arose from forcing activation of the immune system using chronic 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82025 17015226 105971 11629 6493 LAMC2 CSF CSF 2 0.3 Cerebrospinal fluid (CSF) CSF and serum of ALS patients also contain increased levels of 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 82026 17015226 105971 20996 11179 SOD1 ALS ALS 6 4.8 Cerebrospinal fluid (CSF) CSF and serum of ALS patients also contain increased levels of inflammation related factors including 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82044 17015226 105983 20996 11179 SOD1 ALS ALS 24 4.8 of this pathway which is apparently also activated in presymptomatic ALS mice ( Raoul et_amp_#xa0 al. 2002 Raoul et_amp_#xa0 al. 2006 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82046 17015226 105985 20996 11179 SOD1 ALS ALS 2 4.8 Astrocytes in ALS Gatekeepers of Synaptic Glutamate and Excitoxicity 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82053 17015226 105992 20996 11179 SOD1 ALS ALS 19 4.8 editing is reduced in the spinal cord motor neurons of ALS patients compared to controls ( Kawahara et_amp_#xa0 al. 2004 and 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82057 17015226 105996 20996 11179 SOD1 ALS ALS 8 4.8 Astrocyte activation is seen in spinal cords of ALS patients and SOD1 mutant mice ( Hall et_amp_#xa0 al. 1998 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82062 17015226 105998 20996 11179 SOD1 ALS ALS 16 4.8 the few firm mechanistic links between sporadic and SOD1 mutant-caused ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82063 17015226 105999 20996 11179 SOD1 ALS ALS 14 4.8 been reported in synaptosomes obtained from affected CNS tissues of ALS patients ( Rothstein et_amp_#xa0 al. 1992 and levels of EAAT2 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82065 17015226 105999 20996 11179 SOD1 ALS ALS 35 4.8 are reduced in the motor cortex and spinal cord of ALS patients ( Fray et_amp_#xa0 al. 1998 Maragakis et_amp_#xa0 al. 2004 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82067 17015226 106000 20996 11179 SOD1 ALS ALS 7 4.8 This is functionally of consequence for familial ALS in that hSOD1 G93A mice heterozygous for EAAT2 develop earlier-onset 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82073 17015226 106002 20996 11179 SOD1 ALS ALS 20 4.8 to underlie the mild slowing of disease course in human ALS from the only FDA-approved treatment (riluzole; riluzole Doble 1996 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82074 17015226 106003 20996 11179 SOD1 ALS ALS 7 4.8 Additional implication for an astrocytic contribution in ALS is demonstration in cell culture that activated astrocytes induce embryonic 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82080 17015226 106005 20996 11179 SOD1 ALS ALS 3 4.8 Muscle Involvement in ALS Targets for Therapy 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82081 17015226 106006 20996 11179 SOD1 ALS ALS- 7 4.2 Among the earliest events in the human ALS- and SOD1-mediated disease is withdrawal of the motor axons from 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82083 17015226 106007 20996 11179 SOD1 ALS ALS 6 4.8 This denervation generates the progressive paralysis of_amp_#xa0 ALS a consequence of which is muscle atrophy ( Cifuentes-Diaz et_amp_#xa0 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82085 17015226 106009 20996 11179 SOD1 ALS ALS 15 4.8 muscle mass and strength per se can be beneficial in ALS has been attempted by repetitive injection into hSOD1 G93A mice 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82088 17015226 106011 20996 11179 SOD1 ALS ALS 38 4.8 et_amp_#xa0 al. 2005 has led to significant life extensions in ALS transgenic mice 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82092 17015226 106015 20996 11179 SOD1 ALS ALS 14 4.8 number of studies have shown that exercise is beneficial in ALS transgenic animals ( Kirkinezos et_amp_#xa0 al. 2003 and Veldink et_amp_#xa0 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82094 17015226 106016 20996 11179 SOD1 ALS ALS 13 4.8 this synergism is not known and the relevance for human ALS unclear as no consensus has emerged from several efforts to 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82095 17015226 106017 20996 11179 SOD1 ALS ALS 9 4.8 A Model for Selective Vulnerability of Motor Neurons in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82096 17015226 106018 20996 11179 SOD1 ALS ALS 14 4.8 multiple animal models used a determine pathogenic mechanisms in inherited ALS the central insight is that although motor neuron degeneration and 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82107 17015226 106038 20996 11179 SOD1 ALS ALS 10 4.8 these mechanisms (which which have also been invoked in sporadic ALS are right and all combine to underlie selective vulnerability 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82108 17015226 106040 20996 11179 SOD1 ALS ALS 4 4.8 Growth Factor Therapies in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82109 17015226 106041 20996 11179 SOD1 ALS ALS 12 4.8 trophic factors has dominated recent efforts in clinical trials in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82114 17015226 106043 20996 11179 SOD1 ALS ALS 37 4.8 for BDNF ( BDNF Study Group 1999 or CNTF ( ALS CNTF Treatment Study Group 1996 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82116 17015226 106044 20996 11179 SOD1 ALS ALS 12 4.8 the absence of evidence that growth factors were limiting in ALS the weakness of these approaches was insuring adequate delivery to 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82119 17015226 106048 38 22 AAVS1 AAV AAV 15 0.3 A an IGF-1-encoding gene was inserted into adenoassociated virus (AAV), AAV a small replication-defective virus that is episomally maintained within the 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 82121 17015226 106052 38 22 AAVS1 AAV AAV 2 0.3 The same AAV producing GDNF used in the same manner provided only a 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 82124 17015226 106052 38 22 AAVS1 AAV AAV 36 0.3 GDNF encoded by adenovirus ( Acsadi et_amp_#xa0 al. 2002 or AAV ( Wang et_amp_#xa0 al. 2002 delivered intramuscularly 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 82126 17015226 106053 20996 11179 SOD1 ALS ALS 14 4.8 variants in the VEGF gene contribute to some examples of ALS ( Table 1 delivery of an integrating lentivirus encoding VEGF 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82130 17015226 106054 11629 6493 LAMC2 CSF CSF 12 0.3 did continuous ICV infusion of recombinant VEGF protein into the CSF ( Figure_amp_#xa0 4 B disease onset was delayed and survival 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 82137 17015226 106059 20996 11179 SOD1 ALS ALS 3 4.8 Gene Therapies in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82138 17015226 106060 20996 11179 SOD1 ALS ALS 6 4.8 With recognition that the instances of ALS caused by dominant mutation in SOD1 derive from a toxic 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82143 17015226 106066 38 22 AAVS1 AAV AAV 13 0.3 disease onset was seen by retrograde delivery of an siRNA-encoding AAV ( Miller et_amp_#xa0 al. 2005 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 82146 17015226 106075 20996 11179 SOD1 ALS ALS 20 4.8 be an effective dosage-regulatable means of treating neurodegenerative diseases including ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82147 17015226 106077 20996 11179 SOD1 ALS ALS 4 4.8 Stem Cell Therapies in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82148 17015226 106078 20996 11179 SOD1 ALS ALS 9 4.8 The selective age-dependent killing of motor neurons has made ALS one of the poster diseases for cell replacement using stem 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82150 17015226 106089 20996 11179 SOD1 ALS ALS 16 4.8 in a model of chronic motor neuron degeneration such as ALS remains to be determined 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82156 17015226 106098 20996 11179 SOD1 ALS ALS-Causing 3 4.2 Figure_amp_#xa0 1._amp_#xa0 Proposed Toxicities of ALS-Causing SOD1 Protein Aggregates 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82160 17015226 106100 20996 11179 SOD1 ALS ALS 17 4.8 Degeneration and Glial Activation during the Course of SOD1 Mutant-Initiated ALS Disease 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82161 17015226 106101 20996 11179 SOD1 ALS ALS 5 4.8 Figure_amp_#xa0 4._amp_#xa0 New Directions for Therapies in ALS Using Viral Delivery or Direct Infusion into the Brain or 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000885320172874395<>ScoreDetail__5468|IGFALS|0.000464705082286802__11179|SOD1|0.000885320172874395__ 0 0 0 0 0 82230 17018025 106132 20996 11179 SOD1 ALS ALS 23 1.3 progression of neurodegenerative diseases such as amyotrophic lateral sclerosis (ALS), ALS Parkinson's disease and Alzheimer's disease (for for review see Block 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000526036006401261<>ScoreDetail__5468|IGFALS|0.000526036006401261__11179|SOD1|0.000515829408284609__ 0 0 0 0 0 82231 17018025 106135 20996 11179 SOD1 ALS ALS 15 1.3 to reduce neuronal injury in disease models of Parkinson's disease ALS and Alzheimer's disease ( Town et al 2002 Angelov et 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000526036006401261<>ScoreDetail__5468|IGFALS|0.000526036006401261__11179|SOD1|0.000515829408284609__ 0 0 0 0 0 82249 17018025 106149 1759 1102 BRD1 BRL BRL 9 0.3 Culture media sera and antibiotics were purchased from Gibco BRL (Rockville, Rockville MD USA and all other reagents were from 1 JUMiner_v2.2 1 2 gibco brl 0 0 0 0 0 0 0 0 82251 17018025 106161 7361 20442 FBRS FBS FBS 16 0.0 in SATO's medium supplemented with 10% fetal bovine serum (FBS) FBS and seeded in 150 cm 2 flasks at a density 1 JUMiner_v2.2 1 0 0 1 0 TotalCon:2<>20442|FBRS|64319|Complete__13587|FBXO8|26269|No_GeneRif__<>AvaiableGeneRif=1<> 0 0 0 0 0 82262 17018025 106198 3778 10620 CCL21 ECL ECL 1 0.0 The ECL plus detection system (Amersham Amersham Pharmacia Biotech Piscataway NJ USA 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 82264 17018025 106202 7572 17371 FHL5 ACT ACT 16 0.3 follows for IL-4R the primers 5'-CCT GTT CCC AGC CAG ACT AC-3' and 5'-AGC ACA GAC CTC AGC AAC AA-3' T 1 JUMiner_v2.2 1 2 35 0 2 17371 TotalCon:6<>24157|ACOT7|11332|Complete__17371|FHL5|9457|Complete__16|SERPINA3|12|Complete__17780|ACTBL2|345651|No_GeneRif__144|ACTG1|71|Complete__145|ACTG2|72|Complete__<>AvaiableGeneRif=5<>BEST:17371|FHL5|0.000663206860248865<>ScoreDetail__17371|FHL5|0.000663206860248865__145|ACTG2|0.000493896671877277__24157|ACOT7|0.000449445971408322__144|ACTG1|0.000317923116934336__16|SERPINA3|0.000530363016633887__ 0 0 0 0 0 82265 17018025 106202 22079 11778 TGM2 TGC TGC 38 0.0 59.6_amp_deg C for B-actin the primers 5'-TTG CTG ACA GGA TGC AGA AG-3' and 5'-CAG TGA GGC CAG GAT AGA GC-3' 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 82266 17018025 106202 426 318 AGA AGA AGA 39 0.0 C for B-actin the primers 5'-TTG CTG ACA GGA TGC AGA AG-3' and 5'-CAG TGA GGC CAG GAT AGA GC-3' T 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 82267 17018025 106202 21860 11592 TBX1 TGA TGA 43 0.0 primers 5'-TTG CTG ACA GGA TGC AGA AG-3' and 5'-CAG TGA GGC CAG GAT AGA GC-3' T m = 59.6_amp_deg C 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 82268 17018025 106202 8451 13734 GLYAT GAT GAT 46 0.0 ACA GGA TGC AGA AG-3' and 5'-CAG TGA GGC CAG GAT AGA GC-3' T m = 59.6_amp_deg C 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 82269 17018025 106202 426 318 AGA AGA AGA 47 0.0 GGA TGC AGA AG-3' and 5'-CAG TGA GGC CAG GAT AGA GC-3' T m = 59.6_amp_deg C 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 82351 17018025 106262 18723 10261 ROS1 ROS ROS 31 0.0 several substances implicated in neurotoxicity including reactive oxygen species (ROS), ROS such as nitric oxide and superoxide ( pro-inflammatory neurotoxic cytokines 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 82378 17018025 106282 20996 11179 SOD1 ALS ALS 18 1.3 been postulated to play a role in the pathogenesis of ALS Alzheimer's disease and Parkinson's disease ( Le et al 2001 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000526036006401261<>ScoreDetail__5468|IGFALS|0.000526036006401261__11179|SOD1|0.000515829408284609__ 0 0 0 0 0 82449 17018025 106329 20996 11179 SOD1 ALS ALS 25 1.3 self-reactive T cells was neuroprotective in a transgenic model of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000526036006401261<>ScoreDetail__5468|IGFALS|0.000526036006401261__11179|SOD1|0.000515829408284609__ 0 0 0 0 0 83587 17034351 107852 20996 11179 SOD1 ALS ALS 7 1.4 Mouse models of familial amyotrophic lateral sclerosis (ALS) ALS based on overexpressed mutant human Cu Zn-superoxide dismutase (SOD1) SOD1 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00163377962594661<>ScoreDetail__5468|IGFALS|0.000363664701145544__11179|SOD1|0.00163377962594661__ 0 0 0 0 0 79604 17114826 102824 3852 1634 CD1A CD1 CD-1 3 0.0 Young male colony CD-1 mice were injected with the adjuvants at doses equivalent to 11 JUMiner_v2.2 1 0 0 2 1636 TotalCon:3<>1634|CD1A|909|Complete__1635|CD1B|910|Complete__1636|CD1C|911|Complete__<>AvaiableGeneRif=3<>BEST:1636|CD1C|0.000411584225099154<>ScoreDetail__1634|CD1A|0.000380054727880815__1636|CD1C|0.000411584225099154__1635|CD1B|0.000340028108990343__ 0 0 0 0 0 79966 17127558 103267 9947 5468 IGFALS ALS ALS 4 0.3 The possible causes of ALS are unknown and multiple biological systems have been implicated 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000976662897090573<>ScoreDetail__5468|IGFALS|0.000976662897090573__11179|SOD1|0.000839868655379314__ 0 0 0 0 0 79967 17127558 103268 9947 5468 IGFALS ALS ALS 19 0.3 expression profiling to evaluate a broad spectrum of systems in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000976662897090573<>ScoreDetail__5468|IGFALS|0.000976662897090573__11179|SOD1|0.000839868655379314__ 0 0 0 0 0 79968 17127558 103269 9947 5468 IGFALS ALS ALS 21 0.3 and adjacent sensory cortex were collected at autopsy from five ALS patients and three normal individuals 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000976662897090573<>ScoreDetail__5468|IGFALS|0.000976662897090573__11179|SOD1|0.000839868655379314__ 0 0 0 0 0 79969 17127558 103271 9947 5468 IGFALS ALS ALS 12 0.3 difference in expression of 275 genes was found in the ALS motor cortex of the genes whose expression was changed 10 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000976662897090573<>ScoreDetail__5468|IGFALS|0.000976662897090573__11179|SOD1|0.000839868655379314__ 0 0 0 0 0 79970 17127558 103272 9947 5468 IGFALS ALS ALS 30 0.3 consistent with the idea of excitotoxicity contributing to neurodegeneration in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000976662897090573<>ScoreDetail__5468|IGFALS|0.000976662897090573__11179|SOD1|0.000839868655379314__ 0 0 0 0 0 79971 17127558 103274 9947 5468 IGFALS ALS ALS 17 0.3 expression patterns between the sensory and motor cortex in the ALS brains 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000976662897090573<>ScoreDetail__5468|IGFALS|0.000976662897090573__11179|SOD1|0.000839868655379314__ 0 0 0 0 0 79972 17127558 103276 9947 5468 IGFALS ALS ALS 18 0.3 gene array data newly acquired motor and sensory cortex of ALS and control cases (n n = 4 each were used 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000976662897090573<>ScoreDetail__5468|IGFALS|0.000976662897090573__11179|SOD1|0.000839868655379314__ 0 0 0 0 0 79973 17127558 103278 9947 5468 IGFALS ALS ALS 12 0.3 profile data reported here are consistent with evidence that the ALS brain is characterized by an environment that is permissive for 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000976662897090573<>ScoreDetail__5468|IGFALS|0.000976662897090573__11179|SOD1|0.000839868655379314__ 0 0 0 0 0 79974 17127558 103279 9947 5468 IGFALS ALS ALS 16 0.3 that a metal imbalance particularly for zinc could exist in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000976662897090573<>ScoreDetail__5468|IGFALS|0.000976662897090573__11179|SOD1|0.000839868655379314__ 0 0 0 0 0 79975 17127558 103280 9947 5468 IGFALS ALS ALS 17 0.3 that is thought to be part of the pathogenesis in ALS there was a notable lack of increase in genes required 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000976662897090573<>ScoreDetail__5468|IGFALS|0.000976662897090573__11179|SOD1|0.000839868655379314__ 0 0 0 0 0 79976 17127558 103281 9947 5468 IGFALS ALS ALS 14 0.3 a conceptual framework in which to consider the possibility that ALS could result from a failure to mount adequate protective responses 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000976662897090573<>ScoreDetail__5468|IGFALS|0.000976662897090573__11179|SOD1|0.000839868655379314__ 0 0 0 0 0 80156 17128115 103759 9947 5468 IGFALS ALS ALS 6 0.3 Other compounds have been tried in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000932157670843983<>ScoreDetail__5468|IGFALS|0.000302038761641077__11179|SOD1|0.000932157670843983__ 0 0 0 0 0 74827 17190960 95976 20996 11179 SOD1 ALS ALS 18 0.0 rare idiosyncratic reaction that can occur with the riluzole in ALS 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000339500933627567<>ScoreDetail__5468|IGFALS|0.000339500933627567__11179|SOD1|0.000247529181602915__ 0 0 0 0 0 74828 17190960 95988 6981 22140 FAM20C RNS RNS 9 0.0 var oas='URL' var RN = new String (Math.random()); Math.random var RNS = RN.substring (2, 2 11 function DisplayAds (position, position sitepage 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 74829 17190960 95988 6981 22140 FAM20C RNS RNS 27 0.0 position sitepage width height var oaspage= sitepage '/1' ' 1' RNS '@' position if (_version _version ' else document.write (' ' 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 74830 17190960 95996 20996 11179 SOD1 ALS ALS 10 0.0 Riluzole is the only Food and Drug Administration-approved treatment of ALS that has been shown to modestly prolong survival 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000339500933627567<>ScoreDetail__5468|IGFALS|0.000339500933627567__11179|SOD1|0.000247529181602915__ 0 0 0 0 0 74831 17190960 96002 20996 11179 SOD1 ALS ALS 14 0.0 life-threatening systemic inflammatory reaction to riluzole in a patient with ALS 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000339500933627567<>ScoreDetail__5468|IGFALS|0.000339500933627567__11179|SOD1|0.000247529181602915__ 0 0 0 0 0 74832 17190960 96003 20996 11179 SOD1 ALS ALS 7 0.0 A healthy 50-year-old man was diagnosed with ALS after presenting with 1 year of progressive asymmetrical hand weakness 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000339500933627567<>ScoreDetail__5468|IGFALS|0.000339500933627567__11179|SOD1|0.000247529181602915__ 0 0 0 0 0 74833 17190960 96004 20996 11179 SOD1 ALS ALS 9 0.0 He fulfilled the El Escorial Criteria for clinically definite ALS at the time of his presentation 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000339500933627567<>ScoreDetail__5468|IGFALS|0.000339500933627567__11179|SOD1|0.000247529181602915__ 0 0 0 0 0 74834 17190960 96008 20172 10933 SLC17A5 AST AST 10 0.0 His liver enzymes at that time demonstrated a modest elevation AST of 92 (normal, normal 12 to 31 alanine aminotransferase of 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 74863 17191135 96081 18723 10261 ROS1 ROS ROS 6 0.6 However while excess reactive oxygen species (ROS) ROS are toxic regulated ROS play an important role in cell 1 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 74864 17191135 96081 18723 10261 ROS1 ROS ROS 10 0.6 while excess reactive oxygen species (ROS) ROS are toxic regulated ROS play an important role in cell signaling 1 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 74865 17191135 96082 6554 3309 ELA2 HNE HNE 20 0.0 of the product of polyunsaturated fatty acid peroxidation (hydroxynonenals, hydroxynonenals HNE or cholesterol oxidation can disrupt redox homeostasis 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 74866 17191135 96085 18723 10261 ROS1 ROS ROS 18 0.6 is generally associated with metabolic derangements and excessive production of ROS 1 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 74869 17191135 96101 18723 10261 ROS1 ROS ROS 16 0.6 uptake by cells is converted into reactive oxygen species (ROS) ROS 1 1 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 74870 17191135 96103 18723 10261 ROS1 ROS ROS 9 0.6 In contrast to this physiological role pathological actions of ROS occur at an order of magnitude higher concentrations 1 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 74871 17191135 96106 18723 10261 ROS1 ROS ROS 5 0.6 Indeed continuous low concentrations of ROS induce expression of antioxidant enzymes and related defense mechanisms 1 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 74872 17191135 96107 20996 11179 SOD1 ALS ALS 13 1.9 s diseases (HD), HD but also amyotrophic lateral scelrosis (ALS) ALS and Friedreich_amp_#8217 s ataxia (FRDA) FRDA belong to the so-called 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000570340949044605<>ScoreDetail__5468|IGFALS|0.000429859285933318__11179|SOD1|0.000570340949044605__ 0 0 0 0 0 74874 17191135 96111 18723 10261 ROS1 ROS ROS 20 0.6 stress which leads to mitochondrial dysfunction and excessive production of ROS thus inducing oxidative stress 1 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 74875 17191135 96112 18723 10261 ROS1 ROS ROS 9 0.6 The ability of a cell to deal with excessive ROS as well as excessive reactive nitrogen species (RNS) RNS requires 1 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 74876 17191135 96112 6981 22140 FAM20C RNS RNS 17 0.6 excessive ROS as well as excessive reactive nitrogen species (RNS) RNS requires the activation of pro-survival pathways as well as the 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 74879 17191135 96115 6981 22140 FAM20C RNS RNS 21 0.6 stress through its properties to bind and inactivate NO and RNS 11 -14 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 74898 17191135 96135 18723 10261 ROS1 ROS ROS 6 0.6 As a consequence of this aggregation ROS formation increases and a pro-oxidant environment takes place 1 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 74900 17191135 96140 18723 10261 ROS1 ROS ROS 13 0.6 heme oxygenase could _amp_#8220 sense_amp_#8221 NO and thus protect against ROS and RNS insults is supported by the following findings (a) 1 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 74901 17191135 96140 6981 22140 FAM20C RNS RNS 15 0.6 could _amp_#8220 sense_amp_#8221 NO and thus protect against ROS and RNS insults is supported by the following findings (a) a NO 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 74903 17191135 96141 6981 22140 FAM20C RNS RNS 5 0.6 The conception that NO and RNS can be directly involved in the modulation of HO-1 expression 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 74907 17191135 96142 10676 6121 IRF6 LPS LPS 7 0.6 In rat glial cells treatment with lipopolysaccaride (LPS) LPS and interferon-G (IFN-G) IFN-G promotes a rapid increase in both 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 1 1 0 0 0 74913 17191135 96142 10676 6121 IRF6 LPS LPS 45 0.6 of HO-1 mRNA expression by iNOS-derived NO following stimulation with LPS has also been reported in different brain regions particularly in 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 1 1 0 0 0 74939 17191135 96162 10463 6018 IL6 HSF HSFs 7 0.3 These denaturated proteins activate heat shock factors (HSFs) HSFs within the cytosol (or or ER by dissociating other Hsps 13 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 74940 17191135 96162 10463 6018 IL6 HSF HSF 20 0.3 (or or ER by dissociating other Hsps normally bound to HSF 34 13 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 74941 17191135 96163 10463 6018 IL6 HSF HSF 1 0.3 Freed HSF is phosphorylated and forms trimers which enter the nucleus and 13 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 74942 17191135 96163 9652 23316 HSD17B6 HSE HSE 17 0.0 enter the nucleus and bind to heat shock elements (HSE) HSE within the promoters of different heat shock genes leading to 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 74959 17191135 96177 11717 6530 LCT LAC LAC 28 0.0 up-regulation of Hsp60 may be a fundamental site targeted by LAC action with consequent restoration of complex IV function under conditions 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 74965 17191135 96184 18723 10261 ROS1 ROS ROS 8 0.6 Heme oxygenase-1 is induced by various stimuli including ROS RNS ischemia heat shock LPS hemin and the neuroprotective agent 1 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 74966 17191135 96184 6981 22140 FAM20C RNS RNS 9 0.6 Heme oxygenase-1 is induced by various stimuli including ROS RNS ischemia heat shock LPS hemin and the neuroprotective agent Neotrofin 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 74967 17191135 96184 10676 6121 IRF6 LPS LPS 13 0.6 induced by various stimuli including ROS RNS ischemia heat shock LPS hemin and the neuroprotective agent Neotrofin 41 44 -46 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 1 1 0 0 0 74999 17191135 96199 10676 6121 IRF6 LPS LPS 19 0.6 recent data showed that the reductase can be induced by LPS and bromobenzene at a post-transcriptional level whereas heat shock has 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 1 1 0 0 0 75025 17191135 96223 1755 1101 BRCA2 FAD FAD 14 0.3 which each monomer includes two prosthetic flavin adenine dinucleotide (FAD) FAD groups and a NADPH binding site 1 JUMiner_v2.2 1 2 nadph 0 2 3585 TotalCon:3<>1101|BRCA2|675|Complete__3585|FANCD2|2177|Complete__9508|PSEN1|5663|Complete__<>AvaiableGeneRif=3<>BEST:3585|FANCD2|0.000616414966919063<>ScoreDetail__1101|BRCA2|0.000291740765865872__9508|PSEN1|0.000550124664860037__3585|FANCD2|0.000616414966919063__ 0 0 0 0 0 75026 17191135 96224 1755 1101 BRCA2 FAD FAD 18 0.3 consisting of two cysteines adjacent to the flavin ring of FAD in the N-terminal part of the protein 1 JUMiner_v2.2 1 2 nadph 0 2 3585 TotalCon:3<>1101|BRCA2|675|Complete__3585|FANCD2|2177|Complete__9508|PSEN1|5663|Complete__<>AvaiableGeneRif=3<>BEST:3585|FANCD2|0.000616414966919063<>ScoreDetail__1101|BRCA2|0.000291740765865872__9508|PSEN1|0.000550124664860037__3585|FANCD2|0.000616414966919063__ 0 0 0 0 0 75066 17191135 96251 18723 10261 ROS1 ROS ROS 16 0.6 of reducing equivalents Trx by itself acts as antioxidant or ROS scavenger 1 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 75084 17191135 96261 22000 11730 TERT TERT tert 29 0.3 embryo kidney cells to cell death induced by etopoxide or tert -butylhydroperoxide 82 14 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 75088 17191135 96264 18723 10261 ROS1 ROS ROS 16 0.6 to be associated with brain regions producing high levels of ROS 83 1 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 75090 17191135 96269 12369 6893 MAPT tau tau 42 1.8 ubiquitination clearing misfolded proteins to the proteasome and segregation of tau aggregates from the cellular machinery and recruitment of chaperone pairs 1 JUMiner_v2.2 1 2 35 0 0 0 0 0 0 0 0 75095 17191135 96270 7962 4012 FUT1 HSC Hsc 23 0.5 for the E3 ligase carboxyl terminus of heat-shock cognate (Hsc)70-interacting Hsc 70-interacting protein (CHIP) CHIP 86 -88 2 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 75140 17191135 96305 18723 10261 ROS1 ROS ROS 16 0.6 to inhibit lipid peroxidation and to effectively intercept and neutralize ROS and RNS 23 1 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 75141 17191135 96305 6981 22140 FAM20C RNS RNS 18 0.6 lipid peroxidation and to effectively intercept and neutralize ROS and RNS 23 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 75144 17191135 96307 18723 10261 ROS1 ROS ROS 32 0.6 that HO-1-derived BR has the ability to efficiently scavenge both ROS and RNS 8 11 -13 99 1 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 75145 17191135 96307 6981 22140 FAM20C RNS RNS 34 0.6 BR has the ability to efficiently scavenge both ROS and RNS 8 11 -13 99 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 75146 17191135 96309 16343 17468 PDLIM5 LIM Lim 4 0.3 Based on these findings Lim and colleagues have provided convincing evidence that dietary curcumin given 2 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 75147 17191135 96314 11717 6530 LCT LAC LAC 3 0.0 Acetyl-l -carnitine (LAC), LAC is a compound of great interest for its wide clinical 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 75149 17191135 96322 11717 6530 LCT LAC LAC 29 0.0 often obscured by more abundant ones it has reported that LAC modulates specific genes in the rat CNS such as the 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 75154 17191135 96329 20996 11179 SOD1 ALS ALS 7 1.9 Protein conformational diseases such as AD PD ALS HD and MS affect a large portion of our aging 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000570340949044605<>ScoreDetail__5468|IGFALS|0.000429859285933318__11179|SOD1|0.000570340949044605__ 0 0 0 0 0 75155 17191135 96334 18723 10261 ROS1 ROS ROS 24 0.6 (mal)folding mal folding cycles and oxidative damage cycles sustaining excessive ROS production and oxidative stress 125 126 (Figs Figs 3 4 1 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 75156 17191135 96335 18723 10261 ROS1 ROS ROS 1 0.6 These ROS set in motion a lot of redox reactions which can 1 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 75157 17191135 96336 18723 10261 ROS1 ROS ROS 8 0.6 The ability of a cell to deal with ROS and oxidative stress requires functional chaperones antioxidant production protein degradation 1 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 75158 17191135 96337 18723 10261 ROS1 ROS ROS 20 0.6 susceptible to perturbations in the quality control system and that ROS play an important role in the development and/or and or 1 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 75162 17191135 96349 18723 10261 ROS1 ROS ROS 24 0.6 the altered membrane permeability results in Ca 2 leakage and ROS formation 1 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 75163 17191135 96351 18723 10261 ROS1 ROS ROS 0 0.6 ROS generated during and as a consequence of protein misfolding cause 1 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 75164 17191135 96352 18723 10261 ROS1 ROS ROS-induced 10 0.3 In these conditions chaperone proteins themselves can be target of ROS-induced alterations 1 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 76076 17214440 97706 20996 11179 SOD1 ALS ALS 6 1.7 In most cases the cause of ALS is unknown although in a number of familial ALS cases 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0014093227737752<>ScoreDetail__5468|IGFALS|0.000540686672073533__11179|SOD1|0.0014093227737752__ 0 0 0 0 0 76077 17214440 97706 20996 11179 SOD1 ALS ALS 15 1.7 of ALS is unknown although in a number of familial ALS cases mutations in the superoxide dismutase 1 (SOD1) SOD1 gene 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0014093227737752<>ScoreDetail__5468|IGFALS|0.000540686672073533__11179|SOD1|0.0014093227737752__ 0 0 0 0 0 76079 17214440 97711 20996 11179 SOD1 ALS ALS 10 1.7 Despite the fact that only the motor neurons die during ALS it is clear that also other cell types play an 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0014093227737752<>ScoreDetail__5468|IGFALS|0.000540686672073533__11179|SOD1|0.0014093227737752__ 0 0 0 0 0 76080 17214440 97714 20996 11179 SOD1 ALS ALS 31 1.7 disease and on the survival of a mouse model for ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0014093227737752<>ScoreDetail__5468|IGFALS|0.000540686672073533__11179|SOD1|0.0014093227737752__ 0 0 0 0 0 76081 17214440 97716 20996 11179 SOD1 ALS ALS 20 1.7 the mechanisms responsible for the selective motor neuron death during ALS and we hope that this information can help in the 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0014093227737752<>ScoreDetail__5468|IGFALS|0.000540686672073533__11179|SOD1|0.0014093227737752__ 0 0 0 0 0 76082 17214440 97716 20996 11179 SOD1 ALS ALS 48 1.7 incurable disease 3000 Leuven motorneurondood bij Amyotrofische Lateraal Sclerose (ALS) ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.0014093227737752<>ScoreDetail__5468|IGFALS|0.000540686672073533__11179|SOD1|0.0014093227737752__ 0 0 0 0 0 76740 17241118 98804 20996 11179 SOD1 ALS ALS 3 1.7 Amyotrophic lateral sclerosis (ALS) ALS is a neurodegenerative disease characterized by progressive motor neuron loss 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00113214309859518<>ScoreDetail__5468|IGFALS|0.00054973582139694__11179|SOD1|0.00113214309859518__ 0 0 0 0 0 76741 17241118 98806 20996 11179 SOD1 ALS ALS 6 1.7 Neuroinflammation may accelerate the progression of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00113214309859518<>ScoreDetail__5468|IGFALS|0.00054973582139694__11179|SOD1|0.00113214309859518__ 0 0 0 0 0 76745 17241118 98809 20996 11179 SOD1 ALS ALS 10 1.7 In G93A-SOD1 mutant mice the most well-characterized animal model of ALS endogenous cannabinoids are elevated in spinal cords of symptomatic mice 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00113214309859518<>ScoreDetail__5468|IGFALS|0.00054973582139694__11179|SOD1|0.00113214309859518__ 0 0 0 0 0 76750 17241118 98813 20996 11179 SOD1 ALS ALS 21 1.7 function and represent a novel therapeutic modality for treatment of ALS of Arkansas for Medical Sciences Little Rock Arkansas 72205 USA 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00113214309859518<>ScoreDetail__5468|IGFALS|0.00054973582139694__11179|SOD1|0.00113214309859518__ 0 0 0 0 0 67241 17305588 84702 20996 11179 SOD1 ALS ALS 3 0.0 Amyotrophic lateral sclerosis (ALS) ALS is a clinically severe and fatal neurodegenerative disease characterized by 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000905901536738425<>ScoreDetail__5468|IGFALS|0.000267863121944686__11179|SOD1|0.000905901536738425__ 0 0 0 0 0 67242 17305588 84703 20996 11179 SOD1 ALS ALS 8 0.0 While the exact cause of neuronal death in ALS remains unknown it is proposed that multiple molecular defects trigger 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000905901536738425<>ScoreDetail__5468|IGFALS|0.000267863121944686__11179|SOD1|0.000905901536738425__ 0 0 0 0 0 67243 17305588 84705 20996 11179 SOD1 ALS ALS 27 0.0 a pharmacotherapy and in the design of clinical trials in ALS 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000905901536738425<>ScoreDetail__5468|IGFALS|0.000267863121944686__11179|SOD1|0.000905901536738425__ 0 0 0 0 0 67244 17305588 84707 20996 11179 SOD1 ALS ALS 4 0.0 In the context of ALS we review some of the salient issues related to the 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000905901536738425<>ScoreDetail__5468|IGFALS|0.000267863121944686__11179|SOD1|0.000905901536738425__ 0 0 0 0 0 67245 17305588 84707 20996 11179 SOD1 ALS ALS 33 0.0 to assessing studies in translating therapeutic strategies to patients with ALS and discuss therapeutic targets and pharmacological approaches to slowing disease 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000905901536738425<>ScoreDetail__5468|IGFALS|0.000267863121944686__11179|SOD1|0.000905901536738425__ 0 0 0 0 0 67325 17306794 84920 20996 11179 SOD1 ALS ALS 55 1.9 mouse models of the neurodegenerative diseases amyotrophic lateral sclerosis (ALS) ALS and Alzheimer's disease (AD) AD 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000516590229165011<>ScoreDetail__5468|IGFALS|0.00031808959679112__11179|SOD1|0.000516590229165011__ 0 0 0 0 0 67335 17306794 84957 19573 10691 SDS SDS SDS 10 0.0 Proteins were electrophoretically separated on a 10% polyacrylamide gel containing SDS and transferred onto a PVDF-membrane (Carl Carl Roth Karlsruhe Germany 1 JUMiner_v2.2 1 0 0 2 19440 TotalCon:2<>10691|SDS|10993|Complete__19440|SBDS|51119|Complete__<>AvaiableGeneRif=2<>BEST:19440|SBDS|0.00036058737944172<>ScoreDetail__10691|SDS|0.000149094781682641__19440|SBDS|0.00036058737944172__ 0 0 0 0 0 67336 17306794 84958 19329 10524 SALL1 TBS TBS 15 0.0 1% BSA in TBS_amp_#x2013 Tween (0.1% 0.1% Tween 20_amp_#xa0 mM TBS at RT for 1_amp_#xa0 h 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 67337 17306794 84961 7329 16460 FARP2 FRG FRG 32 0.0 with mouse anti-chick -tubulin (1:400,000; 1 400 000 Sigma Deisenhofen FRG HRP-coupled anti-mouse (1:50,000 1 50 000 in 1.5% milk powder 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 67352 17306794 85075 20996 11179 SOD1 ALS ALS 12 1.9 the expression pattern and activity profile during the pathogenesis of ALS and AD in transgenic mouse models and patient material of 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000516590229165011<>ScoreDetail__5468|IGFALS|0.00031808959679112__11179|SOD1|0.000516590229165011__ 0 0 0 0 0 67365 17306794 85133 20996 11179 SOD1 ALS ALS 16 1.9 upregulated in these cells in degenerating brain regions of the ALS transgenic mouse model SOD1-G93A and around senile plaques of APP/PS1 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000516590229165011<>ScoreDetail__5468|IGFALS|0.00031808959679112__11179|SOD1|0.000516590229165011__ 0 0 0 0 0 67373 17306794 85154 20996 11179 SOD1 ALS ALS 29 1.9 et al. 2001 and Deng et al. 2001 and in ALS ( Wootz et al. 2006 and could thereby modulate or 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000516590229165011<>ScoreDetail__5468|IGFALS|0.00031808959679112__11179|SOD1|0.000516590229165011__ 0 0 0 0 0 67617 17311555 85701 20996 11179 SOD1 ALS ALS 38 0.0 rheumatoid arthritis traumatic brain injury and amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000826422729474794<>ScoreDetail__5468|IGFALS|0.000270343336036767__11179|SOD1|0.000826422729474794__ 0 0 0 0 0 69184 17350694 88332 20996 11179 SOD1 ALS ALS 10 0.5 AD Parkinson's disease (PD) PD and amyotrophic lateral sclerosis (ALS) ALS are among the best examples of neurodegenerative disorders associated with 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000948068072053173<>ScoreDetail__5468|IGFALS|0.000363147764825507__11179|SOD1|0.000948068072053173__ 0 0 0 0 0 69185 17350694 88351 20996 11179 SOD1 ALS ALS 20 0.5 or cerebrospinal fluid of individuals affected with AD PD and ALS 3 and 9 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000948068072053173<>ScoreDetail__5468|IGFALS|0.000363147764825507__11179|SOD1|0.000948068072053173__ 0 0 0 0 0 69188 17350694 88366 20996 11179 SOD1 ALS ALS 13 0.5 process has been described in the brains of individuals with ALS and a correlation between the intensity of inflammation and progression 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000948068072053173<>ScoreDetail__5468|IGFALS|0.000363147764825507__11179|SOD1|0.000948068072053173__ 0 0 0 0 0 69189 17350694 88367 20996 11179 SOD1 ALS ALS 19 0.5 the number of activated microglia is greater in individuals with ALS than in controls 17 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000948068072053173<>ScoreDetail__5468|IGFALS|0.000363147764825507__11179|SOD1|0.000948068072053173__ 0 0 0 0 0 69190 17350694 88368 20996 11179 SOD1 ALS ALS 6 0.5 Further evidence of microglial involvement in ALS pathology has come from studies showing pro-survival effects of the 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000948068072053173<>ScoreDetail__5468|IGFALS|0.000363147764825507__11179|SOD1|0.000948068072053173__ 0 0 0 0 0 69191 17350694 88368 20996 11179 SOD1 ALS ALS 34 0.5 spinal cord neurons exposed to cerebrospinal fluid from individuals with ALS 18 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000948068072053173<>ScoreDetail__5468|IGFALS|0.000363147764825507__11179|SOD1|0.000948068072053173__ 0 0 0 0 0 69193 17350694 88369 20996 11179 SOD1 ALS ALS 22 0.5 a G93A mutation (hSOD1G93A), hSOD1G93A an animal model of familial ALS 19 and a clinical trial exploring the effect of a 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000948068072053173<>ScoreDetail__5468|IGFALS|0.000363147764825507__11179|SOD1|0.000948068072053173__ 0 0 0 0 0 69194 17350694 88369 20996 11179 SOD1 ALS ALS 39 0.5 exploring the effect of a immunomodulatory agent in individuals with ALS is currently ongoing 20 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000948068072053173<>ScoreDetail__5468|IGFALS|0.000363147764825507__11179|SOD1|0.000948068072053173__ 0 0 0 0 0 69201 17350694 88419 673 473 AMT AMT AMT 24 0.0 uptake of AEA (by by compounds that we term _amp_#x2018 AMT inhibitors_amp_#x2019 35 ( Table 1 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 69205 17350694 88430 673 473 AMT AMT AMT 13 0.0 also been reported in experimental MS in response to pharmacological AMT inhibitors which can increase levels of AEA 45 and 46 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 69206 17350694 88437 673 473 AMT AMT AMT 6 0.0 Promising results have been reported with AMT inhibitors such as AM404 (see see Chemical names VDM11 and 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 69208 17350694 88438 673 473 AMT AMT AMT 36 0.0 the direct activation of TRPV1 by AM404 rather than to AMT inhibition 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 69209 17350694 88442 673 473 AMT AMT AMT 2 0.0 Notably another AMT inhibitor UCM707 significantly protects mice against the excitotoxin kainic acid 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 69229 17350694 88486 1760 1103 BRD2 NAT NAT 37 0.0 a Ca 2 -dependent N -acyltransferase or trans -acylase (NAT) NAT 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 69231 17350694 88488 673 473 AMT AMT AMT 29 0.0 occurs through cellular uptake by a purported high-affinity transporter (AMT) AMT 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 69232 17350694 88489 673 473 AMT AMT AMT 7 0.0 As yet the existence of a true AMT is a matter of debate and it is possible that 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 69234 17350694 88493 673 473 AMT AMT AMT 24 0.0 purported 2-AG membrane transporter that might be the same as AMT 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 60779 17418957 76946 20996 11179 SOD1 ALS ALS 29 0.5 been implicated in the pathogenesis of amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000611016399378423<>ScoreDetail__5468|IGFALS|0.000375697724345213__11179|SOD1|0.000611016399378423__ 0 0 0 0 0 60780 17418957 76947 20996 11179 SOD1 ALS ALS 6 0.5 The mechanism of neuron death in ALS remains unclear along with the contributions of mitochondrial dysfunction and 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000611016399378423<>ScoreDetail__5468|IGFALS|0.000375697724345213__11179|SOD1|0.000611016399378423__ 0 0 0 0 0 60783 17418957 76951 20996 11179 SOD1 ALS ALS 15 0.5 precede and in fact cause the mitochondrial changes observed in ALS tissue 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000611016399378423<>ScoreDetail__5468|IGFALS|0.000375697724345213__11179|SOD1|0.000611016399378423__ 0 0 0 0 0 60784 17418957 76952 20996 11179 SOD1 ALS ALS 3 0.5 Amyotrophic lateral sclerosis (ALS) ALS is a common fatal neurodegenerative disease which involves the degeneration 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000611016399378423<>ScoreDetail__5468|IGFALS|0.000375697724345213__11179|SOD1|0.000611016399378423__ 0 0 0 0 0 60785 17418957 76953 20996 11179 SOD1 ALS ALS 3 0.5 The pathogenesis of ALS most likely reflects a multifaceted interaction of genetic factors ( 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000611016399378423<>ScoreDetail__5468|IGFALS|0.000375697724345213__11179|SOD1|0.000611016399378423__ 0 0 0 0 0 60786 17418957 76954 20996 11179 SOD1 ALS ALS 9 0.5 Mitochondrial dysfunction is involved in the cellular pathology of ALS ( Orrell and Schapira 2002 and Hervias et al 2005 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000611016399378423<>ScoreDetail__5468|IGFALS|0.000375697724345213__11179|SOD1|0.000611016399378423__ 0 0 0 0 0 60787 17418957 76955 20996 11179 SOD1 ALS ALS 2 0.5 Mitochondria in ALS have been shown to have impaired electron transport increased free 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000611016399378423<>ScoreDetail__5468|IGFALS|0.000375697724345213__11179|SOD1|0.000611016399378423__ 0 0 0 0 0 60789 17418957 76958 20996 11179 SOD1 ALS ALS 13 0.5 ultrastructurally abnormal mitochondria occur at the synapses of MN from ALS patients ( Sasaki and Iwata 1999 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000611016399378423<>ScoreDetail__5468|IGFALS|0.000375697724345213__11179|SOD1|0.000611016399378423__ 0 0 0 0 0 60790 17418957 76959 20996 11179 SOD1 ALS ALS 9 0.5 In addition ultrastructural studies of anterior horn cells of ALS patients and SOD1 mouse model show accumulation of mitochondria in 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000611016399378423<>ScoreDetail__5468|IGFALS|0.000375697724345213__11179|SOD1|0.000611016399378423__ 0 0 0 0 0 60793 17418957 76960 20996 11179 SOD1 ALS ALS 20 0.5 its soluble receptors have been reported to be elevated in ALS patients as compared with healthy controls ( Poloni et al 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000611016399378423<>ScoreDetail__5468|IGFALS|0.000375697724345213__11179|SOD1|0.000611016399378423__ 0 0 0 0 0 60798 17418957 76962 7708 3811 FOXG1 QIN Qin 60 0.0 2001 Brabers and Nottet 2006 and Nakazawa et al 2006 Qin et al. 2007 2 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 60801 17418957 76964 20996 11179 SOD1 ALS ALS 27 0.5 observation that mimics the in vivo histological findings in human ALS and mouse models of the disease 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000611016399378423<>ScoreDetail__5468|IGFALS|0.000375697724345213__11179|SOD1|0.000611016399378423__ 0 0 0 0 0 60803 17418957 76965 20996 11179 SOD1 ALS ALS 28 0.5 et al 2002 and Strong 2003 in the setting of ALS and the known positive effects of the TNF-_amp_#x3b1 blocker thalidomide 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000611016399378423<>ScoreDetail__5468|IGFALS|0.000375697724345213__11179|SOD1|0.000611016399378423__ 0 0 0 0 0 60805 17418957 76965 20996 11179 SOD1 ALS ALS 43 0.5 effects of the TNF-_amp_#x3b1 blocker thalidomide on the progression of ALS in the SOD1 mouse model ( Wong et al 2004 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000611016399378423<>ScoreDetail__5468|IGFALS|0.000375697724345213__11179|SOD1|0.000611016399378423__ 0 0 0 0 0 60809 17418957 76966 20996 11179 SOD1 ALS ALS 34 0.5 migration and have well-documented histological characteristics in the setting of ALS ( Sasaki and Iwata 1996 and Sasaki et al 2005 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000611016399378423<>ScoreDetail__5468|IGFALS|0.000375697724345213__11179|SOD1|0.000611016399378423__ 0 0 0 0 0 60811 17418957 76969 14565 7896 NPAT E14 E14 21 0.0 Sasco Sprague_amp_#x2013 Dawley rat embryos at gestation day 14 (E14) E14 as described previously ( Hanson et al 1998 and Ullian 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 60814 17418957 76973 7361 20442 FBRS FBS FBS 21 0.0 spun down at 1000 r.p.m in the presence of 30% FBS and brought up in serum-free growth medium 1 JUMiner_v2.2 1 0 0 1 0 TotalCon:2<>20442|FBRS|64319|Complete__13587|FBXO8|26269|No_GeneRif__<>AvaiableGeneRif=1<> 0 0 0 0 0 60816 17418957 76974 13439 1304 MRAP B27 B27 10 0.0 base media (Invitrogen, Invitrogen Carlsbad CA USA was supplemented with B27 (Invitrogen), Invitrogen 10 ng/ml ng ml each of BDNF CNTF 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 60817 17418957 76974 1624 1033 BDNF BDNF BDNF 16 0.0 with B27 (Invitrogen), Invitrogen 10 ng/ml ng ml each of BDNF CNTF and GDNF (Peprotech, Peprotech Rocky Hill NJ USA 100 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 60823 17418957 77000 19254 10472 RUNX2 CCD CCD 38 0.0 objective lens and recorded with a Cooke Sensicam QE digital CCD camera (Applied Applied Scientific Instrumentation Eugene OR USA 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 60846 17418957 77051 20996 11179 SOD1 ALS ALS 38 0.5 h representing a typical pattern seen in the histopathology of ALS ( Sasaki and Iwata 1996 and Sasaki et al 2005 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000611016399378423<>ScoreDetail__5468|IGFALS|0.000375697724345213__11179|SOD1|0.000611016399378423__ 0 0 0 0 0 60856 17418957 77074 7708 3811 FOXG1 QIN Qin 60 0.0 2001 Brabers and Nottet 2006 and Nakazawa et al 2006 Qin et al. 2007 2 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 60858 17418957 77075 20996 11179 SOD1 ALS ALS 31 0.5 that associates with axonal spheroid inclusions in degenerating MN of ALS patients ( Robertson et al. 2001 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000611016399378423<>ScoreDetail__5468|IGFALS|0.000375697724345213__11179|SOD1|0.000611016399378423__ 0 0 0 0 0 60860 17418957 77076 20996 11179 SOD1 ALS ALS 18 0.5 thalidomide is effective in increasing survival and delaying progression of ALS phenotypes in the SOD1 G93A mouse model ( Wong et 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000611016399378423<>ScoreDetail__5468|IGFALS|0.000375697724345213__11179|SOD1|0.000611016399378423__ 0 0 0 0 0 60870 17418957 77078 20996 11179 SOD1 ALS ALS 29 0.5 TNF-_amp_#x3b1 and its receptors may connect inflammation to apoptosis in ALS ( Hensley et al. 2002 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000611016399378423<>ScoreDetail__5468|IGFALS|0.000375697724345213__11179|SOD1|0.000611016399378423__ 0 0 0 0 0 60876 17418957 77082 20996 11179 SOD1 ALS ALS 5 0.5 There is increasing evidence that ALS is not just a disease of MN and that neighboring 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000611016399378423<>ScoreDetail__5468|IGFALS|0.000375697724345213__11179|SOD1|0.000611016399378423__ 0 0 0 0 0 60881 17418957 77087 20996 11179 SOD1 ALS ALS 18 0.5 TNF-_amp_#x3b1 is similar to that observed in the MN of ALS patients a disease which has been shown to have elevated 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000611016399378423<>ScoreDetail__5468|IGFALS|0.000375697724345213__11179|SOD1|0.000611016399378423__ 0 0 0 0 0 60885 17418957 77090 20996 11179 SOD1 ALS ALS 19 0.5 glia and secreted cytokines is involved in MN degeneration and ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000611016399378423<>ScoreDetail__5468|IGFALS|0.000375697724345213__11179|SOD1|0.000611016399378423__ 0 0 0 0 0 63131 17439481 80138 20996 11179 SOD1 ALS ALS 13 1.7 suppresses symptom onset and progression of G93A-SOD1 mouse model of ALS by preventing motor neuron death and inflammation 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00147096540591102<>ScoreDetail__5468|IGFALS|0.00078717618434235__11179|SOD1|0.00147096540591102__ 0 0 0 0 0 63132 17439481 80139 20996 11179 SOD1 ALS ALS 18 1.7 enhanced death signals are involved in amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00147096540591102<>ScoreDetail__5468|IGFALS|0.00078717618434235__11179|SOD1|0.00147096540591102__ 0 0 0 0 0 63135 17439481 80141 20996 11179 SOD1 ALS ALS 14 1.7 evaluate the effect of recombinant human EPO (rhEPO) rhEPO on ALS model mice 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00147096540591102<>ScoreDetail__5468|IGFALS|0.00078717618434235__11179|SOD1|0.00147096540591102__ 0 0 0 0 0 63136 17439481 80142 20996 11179 SOD1 ALS ALS 3 1.7 We treated 96 ALS model mice with vehicle only or 1 2.5 or 5 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00147096540591102<>ScoreDetail__5468|IGFALS|0.00078717618434235__11179|SOD1|0.00147096540591102__ 0 0 0 0 0 63137 17439481 80144 20996 11179 SOD1 ALS ALS 13 1.7 that treatment with rhEPO represents a potential therapeutic strategy for ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00147096540591102<>ScoreDetail__5468|IGFALS|0.00078717618434235__11179|SOD1|0.00147096540591102__ 0 0 0 0 0 57141 17555556 72116 20996 11179 SOD1 ALS ALS 3 1.9 Amyotrophic lateral sclerosis (ALS) ALS is a progressive neurodegenerative disease characterized by the selective loss 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00146837970366485<>ScoreDetail__5468|IGFALS|0.000620334567109861__11179|SOD1|0.00146837970366485__ 0 0 0 0 0 57142 17555556 72118 20996 11179 SOD1 ALS ALS 21 1.9 recently been considered as important contributors to the pathogenesis of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00146837970366485<>ScoreDetail__5468|IGFALS|0.000620334567109861__11179|SOD1|0.00146837970366485__ 0 0 0 0 0 57143 17555556 72119 20996 11179 SOD1 ALS ALS 18 1.9 have been demonstrated in the affected areas of tissue from ALS patients ( Engelhardt et al 1993 Henkel et al 2004 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00146837970366485<>ScoreDetail__5468|IGFALS|0.000620334567109861__11179|SOD1|0.00146837970366485__ 0 0 0 0 0 57145 17555556 72120 20996 11179 SOD1 ALS ALS 18 1.9 2 superoxide dismutase (mSOD1), mSOD1 an animal model of familial ALS immune/inflammatory immune inflammatory changes have been observed at early symptomatic 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00146837970366485<>ScoreDetail__5468|IGFALS|0.000620334567109861__11179|SOD1|0.00146837970366485__ 0 0 0 0 0 57146 17555556 72120 20996 11179 SOD1 ALS ALS 55 1.9 suggesting a role for these factors in the pathogenesis of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00146837970366485<>ScoreDetail__5468|IGFALS|0.000620334567109861__11179|SOD1|0.00146837970366485__ 0 0 0 0 0 57158 17555556 72130 20996 11179 SOD1 ALS ALS 24 1.9 microglia also resulted in longer disease duration and survival in ALS mice 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00146837970366485<>ScoreDetail__5468|IGFALS|0.000620334567109861__11179|SOD1|0.00146837970366485__ 0 0 0 0 0 57165 17555556 72135 1759 1102 BRD1 BRL BRL 9 0.3 Culture media sera and antibiotics were purchased from Gibco BRL (Rockville, Rockville MD USA and all other reagents were from 1 JUMiner_v2.2 1 2 gibco brl 0 0 0 0 0 0 0 0 57181 17555556 72183 3778 10620 CCL21 ECL ECL 1 0.0 The ECL system (Amersham Amersham Biosciences Piscataway NJ USA was used to 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 57297 17555556 72262 20996 11179 SOD1 ALS ALS 49 1.9 to be up-regulated in a transgenic mouse model of familial ALS both in early symptomatic stages and at the end-stage of 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00146837970366485<>ScoreDetail__5468|IGFALS|0.000620334567109861__11179|SOD1|0.00146837970366485__ 0 0 0 0 0 57299 17555556 72263 20996 11179 SOD1 ALS ALS 19 1.9 production which plays a deleterious role in the pathogenesis of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00146837970366485<>ScoreDetail__5468|IGFALS|0.000620334567109861__11179|SOD1|0.00146837970366485__ 0 0 0 0 0 57321 17555556 72282 20996 11179 SOD1 ALS ALS 6 1.9 In contrast free IGF-1 levels in ALS patients_amp_#8217 spinal cords and serum were shown to be significantly 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00146837970366485<>ScoreDetail__5468|IGFALS|0.000620334567109861__11179|SOD1|0.00146837970366485__ 0 0 0 0 0 57324 17555556 72285 20996 11179 SOD1 ALS ALS 10 1.9 2003 successfully prolonged life and delayed disease progression in transgenic ALS mice by enhancing IGF-1 expression in motoneurons 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00146837970366485<>ScoreDetail__5468|IGFALS|0.000620334567109861__11179|SOD1|0.00146837970366485__ 0 0 0 0 0 57379 17555556 72324 20996 11179 SOD1 ALS ALS 9 1.9 A recent study showed a novel pathogenic mechanism for ALS based on chromogranin-mediated secretion of misfolded mutant SOD1 but not 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00146837970366485<>ScoreDetail__5468|IGFALS|0.000620334567109861__11179|SOD1|0.00146837970366485__ 0 0 0 0 0 58392 17569578 73548 8612 4458 GPI PGI PGI 5 0.3 PPAR_amp_#x3b2;/_amp_#x3b4; PPAR_amp_#x3b2 _amp_#x3b4 agonists include the prostacyclin PGI 2 and synthetic agents including GW0742 GW501516 and GW7842 1 JUMiner_v2.2 1 2 prostacyclin 0 2 1044 TotalCon:2<>1044|BGN|633|Complete__4458|GPI|2821|Complete__<>AvaiableGeneRif=2<>BEST:1044|BGN|0.000683936789173194<>ScoreDetail__1044|BGN|0.000683936789173194__4458|GPI|0.000553558943116586__ 0 0 0 0 0 58419 17569578 73617 22088 15934 TH1L TH1 Th1 31 0.0 cord sections and an increase in T cell proliferation and Th1 response upon MOG peptide stimulation when compared to PPAR_amp_#x3b3 wild 2 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58428 17569578 73639 11668 6518 LBR PHA PHA 24 0.0 on human T-leukemia cells (Jurkat Jurkat cells and phytohemagglutinin (PHA)-stimulated PHA -stimulated PBMCs derived from 21 MS patients and 12 healthy 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58429 17569578 73640 11668 6518 LBR PHA PHA-induced 6 0.0 In this study all drugs suppressed PHA-induced T-cell proliferation by 40_amp_#x2013 50% and secretion of IFN_amp_#x3b3 and 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58430 17569578 73648 11668 6518 LBR PHA PHA-induced 7 0.0 Importantly long-term oral pioglitazone treatment prevented the PHA-induced loss of PPAR_amp_#x3b3 expression in PBMCs from diabetic patients demonstrating 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58453 17569578 73737 14535 7873 NOS2A iNOS iNOS-positive 11 1.0 decreased microglial and astrocyte activation and reduced the number of iNOS-positive cells in both the striatum and SNpc 19 and 47 1 JUMiner_v2.2 1 2 32 0 0 0 0 0 0 0 0 58455 17569578 73742 13434 7225 MPZ MPP MPP 10 0.3 colleagues demonstrated that PPAR_amp_#x3b2;/_amp_#x3b4;_amp_#xa0;agonist PPAR_amp_#x3b2 _amp_#x3b4 _amp_#xa0 agonist treatment of MPP stimulated neuroblastoma cells exerted neuroprotective effects 85 1 JUMiner_v2.2 1 2 UserEdit 0 2 7214 TotalCon:2<>7214|MPHOSPH6|10200|Complete__7225|MPZ|4359|Complete__<>AvaiableGeneRif=2<>BEST:7214|MPHOSPH6|0.000624256837098692<>ScoreDetail__7214|MPHOSPH6|0.000624256837098692__7225|MPZ|0.000474578928800094__ 1 1 0 0 0 58456 17569578 73748 20996 11179 SOD1 ALS ALS 3 0.5 Amyotrophic lateral sclerosis (ALS) ALS represents a fatal neurodegenerative disorder characterized by progressive death of 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000909962863677726<>ScoreDetail__5468|IGFALS|0.00074992500749925__11179|SOD1|0.000909962863677726__ 0 0 0 0 0 58457 17569578 73749 20996 11179 SOD1 ALS ALS 28 0.5 treatment strategies are being evaluated in transgenic mouse models of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000909962863677726<>ScoreDetail__5468|IGFALS|0.00074992500749925__11179|SOD1|0.000909962863677726__ 0 0 0 0 0 58458 17569578 73750 20996 11179 SOD1 ALS ALS 27 0.5 tested whether SOD1-G93A transgenic mice an established mouse model of ALS benefit from oral treatment with the PPAR_amp_#x3b3 agonist pioglitazone 92 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000909962863677726<>ScoreDetail__5468|IGFALS|0.00074992500749925__11179|SOD1|0.000909962863677726__ 0 0 0 0 0 58463 17569578 73759 20996 11179 SOD1 ALS ALS 12 0.5 underlying mechanisms are not fully understood both studies suggest that ALS patients may benefit from treatment with this PPAR_amp_#x3b3 agonist 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000909962863677726<>ScoreDetail__5468|IGFALS|0.00074992500749925__11179|SOD1|0.000909962863677726__ 0 0 0 0 0 58464 17569578 73760 20996 11179 SOD1 ALS ALS 25 0.5 a first clinical trial (GERPALS, GERPALS German pioglitazone study in ALS which will start to enroll patients late 2007 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000909962863677726<>ScoreDetail__5468|IGFALS|0.00074992500749925__11179|SOD1|0.000909962863677726__ 0 0 0 0 0 58477 17569578 73804 19623 10722 SELPLG CLA CLA 5 0.3 Treatment with conjugated linoleic acid (CLA) CLA inhibited growth in human ADF glioblastoma cells 33 and 114 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 58478 17569578 73804 6176 15750 DSTN ADF ADF 10 0.0 with conjugated linoleic acid (CLA) CLA inhibited growth in human ADF glioblastoma cells 33 and 114 and this was associated with 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58479 17569578 73805 19623 10722 SELPLG CLA CLA 7 0.3 Cimini and others 33 also found that CLA and the PPAR_amp_#x3b3 agonist GW347845X induced apoptosis in ADF cells 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 58480 17569578 73805 6176 15750 DSTN ADF ADF 16 0.0 that CLA and the PPAR_amp_#x3b3 agonist GW347845X induced apoptosis in ADF cells suggesting that this effect was mediated by PPAR_amp_#x3b3 activation 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58481 17569578 73806 19623 10722 SELPLG CLA CLA 16 0.3 finding that the PPAR_amp_#x3b3 antagonist GW259662 completely prevented both the CLA and GW347854X-induced effects on cell growth and apoptosis 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 58483 17569578 73809 18723 10261 ROS1 ROS ROS 10 0.0 and co-workers reported that generation of reactive oxygen species (ROS) ROS was likely to be responsible for glitazone-induced glial cell death 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58498 17569578 73851 11940 6667 LPA LPA LPA 14 0.0 cell death type II or autophagy and the serum lysolipid LPA is responsible for modulating this cellular response 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58500 17569578 73853 17264 9353 PRDX2 TSA TSA 14 0.0 PGJ 2 and the histone deacetylase inhibitor trichostatin A (TSA) TSA enhanced the growth inhibition effects and is therefore proposed as 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58783 17574754 74304 8612 4458 GPI PGI PGI 6 0.6 We find that PGD 2 PGI 2 and PGF 2_amp_#x3b1 receptors protect motor neurons in an 1 JUMiner_v2.2 1 2 prostacyclin 0 2 4458 TotalCon:2<>1044|BGN|633|Complete__4458|GPI|2821|Complete__<>AvaiableGeneRif=2<>BEST:4458|GPI|0.000430668045800177<>ScoreDetail__1044|BGN|0.000352631672412787__4458|GPI|0.000430668045800177__ 0 0 0 0 0 58784 17574754 74304 16457 8891 PGD PGD PGD 3 0.0 We find that PGD 2 PGI 2 and PGF 2_amp_#x3b1 receptors protect motor neurons 1 JUMiner_v2.2 1 0 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 58785 17574754 74304 16459 8893 PGF PGF PGF 10 0.0 We find that PGD 2 PGI 2 and PGF 2_amp_#x3b1 receptors protect motor neurons in an organotypic spinal cord 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58786 17574754 74304 20996 11179 SOD1 ALS ALS 26 0.0 an organotypic spinal cord model of amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00135542706503777<>ScoreDetail__5468|IGFALS|0.000184791647417537__11179|SOD1|0.00135542706503777__ 0 0 0 0 0 58787 17574754 74305 8612 4458 GPI PGI PGI 2 0.6 In addition PGI 2 and TXA 2 receptors rescue CA1 neurons in an 1 JUMiner_v2.2 1 2 prostacyclin 0 2 4458 TotalCon:2<>1044|BGN|633|Complete__4458|GPI|2821|Complete__<>AvaiableGeneRif=2<>BEST:4458|GPI|0.000430668045800177<>ScoreDetail__1044|BGN|0.000352631672412787__4458|GPI|0.000430668045800177__ 0 0 0 0 0 58788 17574754 74305 3353 1368 CA1 CA1 CA1 9 0.0 In addition PGI 2 and TXA 2 receptors rescue CA1 neurons in an organotypic hippocampal model of N -methyl-d 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58792 17574754 74308 20996 11179 SOD1 ALS ALS 43 0.0 of chronic neurodegeneration that model human amyotrophic lateral sclerosis (ALS), ALS Parkinson's disease (PD), PD and Alzheimer's disease (AD; AD reviewed 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00135542706503777<>ScoreDetail__5468|IGFALS|0.000184791647417537__11179|SOD1|0.00135542706503777__ 0 0 0 0 0 58794 17574754 74309 20996 11179 SOD1 ALS ALS 12 0.0 increased COX-2 and prostaglandin production have been observed in AD ALS multiple sclerosis and PD 1 10 22 and 24 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00135542706503777<>ScoreDetail__5468|IGFALS|0.000184791647417537__11179|SOD1|0.00135542706503777__ 0 0 0 0 0 58801 17574754 74314 8612 4458 GPI PGI PGI 12 0.6 The five prostaglandins PGE 2 PGF 2_amp_#x3b1 PGD 2 PGI 2 (prostacyclin), prostacyclin and TXA 2 (thromboxane) thromboxane bind to 1 JUMiner_v2.2 1 2 prostacyclin 0 2 4458 TotalCon:2<>1044|BGN|633|Complete__4458|GPI|2821|Complete__<>AvaiableGeneRif=2<>BEST:4458|GPI|0.000430668045800177<>ScoreDetail__1044|BGN|0.000352631672412787__4458|GPI|0.000430668045800177__ 0 0 0 0 0 58802 17574754 74314 16459 8893 PGF PGF PGF 6 0.0 The five prostaglandins PGE 2 PGF 2_amp_#x3b1 PGD 2 PGI 2 (prostacyclin), prostacyclin and TXA 2 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58803 17574754 74314 16457 8891 PGD PGD PGD 9 0.0 The five prostaglandins PGE 2 PGF 2_amp_#x3b1 PGD 2 PGI 2 (prostacyclin), prostacyclin and TXA 2 (thromboxane) thromboxane 1 JUMiner_v2.2 1 0 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 58811 17574754 74315 16457 8891 PGD PGD PGD 28 0.0 subtypes (EP1, EP1 EP2 EP3 and EP4 and for the PGD 2 DP family where there are two receptors DP1 and 1 JUMiner_v2.2 1 0 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 58821 17574754 74320 3353 1368 CA1 CA1 CA1 11 0.0 have previously reported that the PGE 2 EP2 receptor rescues CA1 pyramidal neurons in organotypic hippocampal cultures treated with NMDA or 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58824 17574754 74322 16457 8891 PGD PGD PGD 0 0.0 PGD 2 signaling via its DP1 receptor similarly rescues CA1 and 1 JUMiner_v2.2 1 0 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 58825 17574754 74322 3353 1368 CA1 CA1 CA1 10 0.0 PGD 2 signaling via its DP1 receptor similarly rescues CA1 and CA3 neurons in organotypic hippocampal slices treated with NMDA 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58826 17574754 74322 3355 1374 CA3 CA3 CA3 10 0.0 PGD 2 signaling via its DP1 receptor similarly rescues CA1 and CA3 neurons in organotypic hippocampal slices treated with NMDA 15 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58827 17574754 74322 3355 1374 CA3 CA3 CA3 12 0.0 2 signaling via its DP1 receptor similarly rescues CA1 and CA3 neurons in organotypic hippocampal slices treated with NMDA 14 and 15 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58836 17574754 74334 16457 8891 PGD PGD PGD 32 0.0 (THA; THA Tocris Elisville MO propidium idodide (PI, PI Sigma PGD 2 BW245C fluprostenol 13 14-dehydro-15-cyclohexyl carbaprostacyclin U-46619 and 13 14-dihydro-15-keto-PGD 1 JUMiner_v2.2 1 0 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 58837 17574754 74337 20996 11179 SOD1 ALS ALS 12 0.0 d l -threohydroxyaspartate (THA), THA a glutamate transport inhibitor models ALS with motor neuron loss resulting from chronic glutamate toxicity 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00135542706503777<>ScoreDetail__5468|IGFALS|0.000184791647417537__11179|SOD1|0.00135542706503777__ 0 0 0 0 0 58839 17574754 74339 16457 8891 PGD PGD PGD 0 0.0 PGD 2 and DP1 DP2 IP TP and FP receptor agonists 1 JUMiner_v2.2 1 0 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 58843 17574754 74347 3353 1368 CA1 CA1 CA1 23 0.0 M NMDA and PI and incubated overnight to induce maximum CA1 neuronal loss and imaged 24 h later ( t max 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58844 17574754 74348 3353 1368 CA1 CA1 CA1 12 0.0 was assayed by quantification of mean PI fluorescence in the CA1 subregion of each hippocampal slice for t b t 24h 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58850 17574754 74357 16457 8891 PGD PGD PGD 4 0.0 Co-administration of THA and PGD 2 protected motor neurons at nM doses selective agonists of 1 JUMiner_v2.2 1 0 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 58853 17574754 74358 8612 4458 GPI PGI PGI 18 0.6 agonist fluprostenol ( Fig 1 D and the prostacyclin (PGI PGI 2 IP receptor agonist carbaprostacyclin ( Fig 1 E significantly 1 JUMiner_v2.2 1 2 prostacyclin 0 2 4458 TotalCon:2<>1044|BGN|633|Complete__4458|GPI|2821|Complete__<>AvaiableGeneRif=2<>BEST:4458|GPI|0.000430668045800177<>ScoreDetail__1044|BGN|0.000352631672412787__4458|GPI|0.000430668045800177__ 0 0 0 0 0 58854 17574754 74358 16459 8893 PGF PGF PGF 5 0.0 In addition co-administration of the PGF 2_amp_#x3b1 FP receptor agonist fluprostenol ( Fig 1 D and 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58856 17574754 74360 16457 8891 PGD PGD PGD 2 0.0 Administration of PGD 2 DP1 DP2 FP IP and TP agonists alone had 1 JUMiner_v2.2 1 0 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 58860 17574754 74361 16457 8891 PGD PGD PGD 14 0.1 that activation of the PGE 2 EP2 receptor and the PGD 2 DP1 receptor protect CA1 neurons in organotypic hippocampal slices 6 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 1 1 0 0 0 58861 17574754 74361 3353 1368 CA1 CA1 CA1 19 0.0 2 EP2 receptor and the PGD 2 DP1 receptor protect CA1 neurons in organotypic hippocampal slices treated with NMDA 15 and 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58862 17574754 74362 3353 1368 CA1 CA1 CA1 9 0.0 Here we examined effects of additional prostaglandin receptors on CA1 neuronal survival in hippocampal slices treated acutely with NMDA 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58865 17574754 74366 3353 1368 CA1 CA1 CA1 13 0.0 FP IP and TP agonists alone had no effect on CA1 neuronal survival (data data not shown 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58873 17574754 74370 3353 1368 CA1 CA1 CA1 13 0.0 LPS (0.1_amp_#x2013;5 0.1_amp_#x2013 5 _amp_#x3bc;g/ml) _amp_#x3bc g ml leads to CA1 pyramidal death as measured by PI fluorescence 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58879 17574754 74372 3353 1368 CA1 CA1 CA1 11 0.0 activation of the EP2 and EP3 receptors also increased LPS-mediated CA1 neurotoxicity ( Fig 3 B and C 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58881 17574754 74375 16457 8891 PGD PGD PGD 15 0.0 models have identified paradoxical neuroprotective effects of PGE 2 and PGD 2 receptors that have been confirmed in vivo in models 1 JUMiner_v2.2 1 0 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 58882 17574754 74377 16457 8891 PGD PGD PGD 13 0.0 slices that are chronically exposed to glutamate reuptake inhibitors both PGD 2 DP receptors as well as the PGF 2_amp_#x3b1 FP 1 JUMiner_v2.2 1 0 0 1 0 TotalCon:2<>8891|PGD|5226|No_GeneRif__8923|PHGDH|26227|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 58883 17574754 74377 16459 8893 PGF PGF PGF 21 0.0 inhibitors both PGD 2 DP receptors as well as the PGF 2_amp_#x3b1 FP and prostacyclin IP receptors rescued motor neurons 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58885 17574754 74378 20996 11179 SOD1 ALS ALS 22 0.0 model as well as in the transgenic model of Familial ALS 3 7 and 8 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00135542706503777<>ScoreDetail__5468|IGFALS|0.000184791647417537__11179|SOD1|0.00135542706503777__ 0 0 0 0 0 58891 17574754 74381 3353 1368 CA1 CA1 CA1 17 0.0 with picomolar concentrations of agonist resulted in significant rescue of CA1 pyramidal neurons 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58897 17574754 74386 16459 8893 PGF PGF PGF 9 0.0 A similar divergence of effect was found for the PGF 2_amp_#x3b1 FP receptor which had no effect on CA1 neuronal 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58898 17574754 74386 3353 1368 CA1 CA1 CA1 18 0.0 the PGF 2_amp_#x3b1 FP receptor which had no effect on CA1 neuronal survival unlike its significant protective effect in the spinal 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58901 17574754 74389 3353 1368 CA1 CA1 CA1 18 0.0 15 and 16 and EP3 ( Fig 2 receptor rescues CA1 neurons stimulated with NMDA 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58906 17574754 74390 3353 1368 CA1 CA1 CA1 30 0.0 stimulation of the EP2 or EP3 receptor now increases LPS-mediated CA1 toxicity 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58910 17574754 74391 3353 1368 CA1 CA1 CA1 13 0.0 not find a consistent dose response of LPS and increasing CA1 toxicity in this paradigm the addition of either PGE 2 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 58912 17574754 74391 3353 1368 CA1 CA1 CA1 42 0.0 the EP3 agonist sulprostone (10 10 nM consistently enhanced LPS-induced CA1 PI fluorescence 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 59187 17582695 74872 8595 19680 GPBAR1 GPCR GPCRs 8 0.6 VN receptors are class II G protein-coupled receptors (GPCRs) GPCRs which couple primarily to the adenylate cyclase (AC)-cyclic AC -cyclic 13 JUMiner_v2.2 1 2 g protein-coupled receptor 0 2 14298 TotalCon:15<>19680|GPBAR1|151306|Complete__24884|OXER1|165140|Complete__18274|CYSLTR2|57105|Complete__4042|FZD4|8322|Complete__23624|GPR151|134391|Complete__23626|GPR166P|442206|No_GeneRif__30224|GPR172A|79581|No_GeneRif__30225|GPR172B|55065|No_GeneRif__18510|GPRC6A|222545|Complete__19719|LGR6|59352|No_GeneRif__14298|LPAR3|23566|Complete__17962|MRGPRX1|259249|No_GeneRif__17980|MRGPRX3|117195|Complete__17617|MRGPRX4|117196|No_GeneRif__13300|GPR61|83873|Complete__<>AvaiableGeneRif=9<>BEST:14298|LPAR3|0.00104185486299307<>ScoreDetail__23624|GPR151|0.000317073170731707__17980|MRGPRX3|0.00021680216802168__19680|GPBAR1|0.000982292014700969__18510|GPRC6A|0.0004516711833785__13300|GPR61|0.000670731707317073__18274|CYSLTR2|0.000692855601122383__14298|LPAR3|0.00104185486299307__4042|FZD4|0.000587427001030574__24884|OXER1|0.00061617458279846__ 0 0 0 0 0 59188 17582695 74873 20996 11179 SOD1 ALS ALS 12 0.5 in multiple sclerosis (MS) MS and amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59189 17582695 74876 20996 11179 SOD1 ALS ALS 15 0.5 that autoimmune dysfunction of VNs may contribute to MS and ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59190 17582695 74877 20996 11179 SOD1 ALS ALS 3 0.5 While MS and ALS differ in important respects they have common pathogenic features including 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59191 17582695 74879 20996 11179 SOD1 ALS ALS 5 0.5 Diseases such as MS and ALS may represent related conditions resulting from variation in expression of 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59194 17582695 74887 8595 19680 GPBAR1 GPCR GPCRs 8 0.6 VN receptors are class II G protein-coupled receptors (GPCRs) GPCRs which couple primarily to the adenylate cyclase (AC)-cyclic AC -cyclic 13 JUMiner_v2.2 1 2 g protein-coupled receptor 0 2 14298 TotalCon:15<>19680|GPBAR1|151306|Complete__24884|OXER1|165140|Complete__18274|CYSLTR2|57105|Complete__4042|FZD4|8322|Complete__23624|GPR151|134391|Complete__23626|GPR166P|442206|No_GeneRif__30224|GPR172A|79581|No_GeneRif__30225|GPR172B|55065|No_GeneRif__18510|GPRC6A|222545|Complete__19719|LGR6|59352|No_GeneRif__14298|LPAR3|23566|Complete__17962|MRGPRX1|259249|No_GeneRif__17980|MRGPRX3|117195|Complete__17617|MRGPRX4|117196|No_GeneRif__13300|GPR61|83873|Complete__<>AvaiableGeneRif=9<>BEST:14298|LPAR3|0.00104185486299307<>ScoreDetail__23624|GPR151|0.000317073170731707__17980|MRGPRX3|0.00021680216802168__19680|GPBAR1|0.000982292014700969__18510|GPRC6A|0.0004516711833785__13300|GPR61|0.000670731707317073__18274|CYSLTR2|0.000692855601122383__14298|LPAR3|0.00104185486299307__4042|FZD4|0.000587427001030574__24884|OXER1|0.00061617458279846__ 0 0 0 0 0 59195 17582695 74890 567 877 ALDH7A1 PDE PDE 7 0.0 Importantly cAMP effects are maintained by phosphodiesterase (PDE) PDE inhibitors which may have implications for treatment of postulated cAMP 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 59196 17582695 74892 20996 11179 SOD1 ALS ALS 12 0.5 in multiple sclerosis (MS) MS and amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59197 17582695 74896 20996 11179 SOD1 ALS ALS 15 0.5 that autoimmune dysfunction of VNs may contribute to MS and ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59198 17582695 74897 20996 11179 SOD1 ALS ALS 4 0.5 Aetiology of MS and ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59199 17582695 74898 20996 11179 SOD1 ALS ALS 5 0.5 The causes of MS and ALS are unknown 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59200 17582695 74899 20996 11179 SOD1 ALS ALS 7 0.5 While complex diseases such as MS and ALS are thought likely to demonstrate multiple genetic and environmental factors 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59201 17582695 74900 20996 11179 SOD1 ALS ALS 8 0.5 Exposure to environmental chemicals increases risk of sporadic ALS particularly industrial herbicide/pesticide herbicide pesticide exposure 4 and military service 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59202 17582695 74900 20996 11179 SOD1 ALS ALS 29 0.5 possibly Gulf War service may also hold an association for ALS 5 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59203 17582695 74901 20996 11179 SOD1 ALS ALS 16 0.5 s disease (PD) PD dementia complex (PDC) PDC and atypical ALS which may have been attributed to Rotenone a natural toxin 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59204 17582695 74901 16271 8759 PDC PDC PDC 13 0.0 have experienced Parkinson_amp_#x2019 s disease (PD) PD dementia complex (PDC) PDC and atypical ALS which may have been attributed to Rotenone 1 JUMiner_v2.2 1 0 0 2 9153 TotalCon:2<>8759|PDC|5132|Complete__9153|PNKD|25953|Complete__<>AvaiableGeneRif=2<>BEST:9153|PNKD|0.00048780487804878<>ScoreDetail__8759|PDC|0.000154043645699615__9153|PNKD|0.00048780487804878__ 0 0 0 0 0 59207 17582695 74902 20996 11179 SOD1 ALS ALS 24 0.5 may have predisposed to neuronal pathology of Parkinson_amp_#x2019 s or ALS type because of its specific anatomical distribution 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59209 17582695 74905 20996 11179 SOD1 ALS ALS 6 0.5 As noted above clinical presentation of ALS is not confined to motor neuron abnormality 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59210 17582695 74907 20996 11179 SOD1 ALS ALS 9 0.5 Behavioural changes such as apathy occur at onset of ALS suggesting this link with fronto-temporal dementia 15 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59211 17582695 74908 20996 11179 SOD1 ALS ALS 17 0.5 volume and correlates with psychopathological findings in later stages of ALS 16 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59212 17582695 74909 20996 11179 SOD1 ALS ALS 5 0.5 Alterations in cortical functions in ALS suggest upper motor neuron pathology 17 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59213 17582695 74910 20996 11179 SOD1 ALS ALS 9 0.5 Moreover cerebral degeneration is predictive of reduced survival in ALS 18 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59214 17582695 74914 20996 11179 SOD1 ALS ALS 19 0.5 may be early and significant events in both MS and ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59219 17582695 74917 20996 11179 SOD1 ALS ALS 5 0.5 Serum VEGF is higher in ALS in human samples than controls 23 as it is in 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59222 17582695 74918 20996 11179 SOD1 ALS ALS 21 0.5 spinal cord of transgenic SOD1 (G93A) G93A mice models of ALS 25 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59224 17582695 74919 11629 6493 LAMC2 CSF CSF 6 0.3 High erythropoietin and low VEGF in CSF from hypoxemic ALS patients suggest an abnormal response to hypoxia 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 59225 17582695 74919 20996 11179 SOD1 ALS ALS 9 0.5 High erythropoietin and low VEGF in CSF from hypoxemic ALS patients suggest an abnormal response to hypoxia compared with hypoxic 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59227 17582695 74920 11629 6493 LAMC2 CSF CSF 6 0.3 Moreover low concentrations of EPO in CSF point to a rapid progression of disease that may be 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 59228 17582695 74923 20996 11179 SOD1 ALS ALS 3 0.5 While MS and ALS differ in important respects they have common pathogenic features including 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59229 17582695 74924 20996 11179 SOD1 ALS ALS 15 0.5 are modulated by certain cytokines in neurodegenerative disorders such as ALS and PD e.g. IL-1beta and IL-6 32 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59232 17582695 74925 20996 11179 SOD1 ALS ALS 30 0.5 is suggested associated with oxidative stress and glial activation in ALS 33 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59233 17582695 74927 20996 11179 SOD1 ALS ALS 15 0.5 stages of disease play causative roles in the pathogenesis of ALS in rodent models 35 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59235 17582695 74930 20996 11179 SOD1 ALS ALS 16 0.5 to the development and progression of motor neuron pathology in ALS 36 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59240 17582695 74932 20996 11179 SOD1 ALS ALS 22 0.5 in the spinal motor neurons of mouse models of familial ALS 38 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59242 17582695 74933 20996 11179 SOD1 ALS ALS 12 0.5 alpha signalling is postulated to have a key role in ALS 39 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59247 17582695 74936 20996 11179 SOD1 ALS ALS 16 0.5 and proinflammatory cytokines are implicated in a lipopolysaccharide model of ALS suggesting that environmental factors and innate immunity are linked 42 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59248 17582695 74937 20996 11179 SOD1 ALS ALS 11 0.5 and inflammatory responses appear to magnify motor neuron degeneration in ALS 43 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59250 17582695 74939 20996 11179 SOD1 ALS ALS 8 0.5 Moreover TGFbeta1 is significantly higher in long duration ALS than short duration ALS possibly indicating severity and duration of 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59251 17582695 74939 20996 11179 SOD1 ALS ALS 12 0.5 is significantly higher in long duration ALS than short duration ALS possibly indicating severity and duration of the disease 45 and 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59252 17582695 74944 20996 11179 SOD1 ALS ALS 7 0.5 Also neurodegenerative disorders such as PD and ALS have been termed protein misfolding disorders because of their association 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59255 17582695 74946 20996 11179 SOD1 ALS ALS 6 0.5 Vasoactive neuropeptide dysfunction in MS and ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59256 17582695 74947 20996 11179 SOD1 ALS ALS 13 0.5 critical role in neuronal survival however in a series of ALS patients CSF levels of VIP were found to be significantly 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59257 17582695 74947 11629 6493 LAMC2 CSF CSF 15 0.3 in neuronal survival however in a series of ALS patients CSF levels of VIP were found to be significantly lower compared 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 59260 17582695 74948 20996 11179 SOD1 ALS ALS 18 0.5 in spinal cord cultures suggesting its use in treatment of ALS 53 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59265 17582695 74954 8595 19680 GPBAR1 GPCR GPCRs 3 0.6 As noted above GPCRs transduce signals promoting cellular survival and neurotrophic activity 13 JUMiner_v2.2 1 2 g protein-coupled receptor 0 2 14298 TotalCon:15<>19680|GPBAR1|151306|Complete__24884|OXER1|165140|Complete__18274|CYSLTR2|57105|Complete__4042|FZD4|8322|Complete__23624|GPR151|134391|Complete__23626|GPR166P|442206|No_GeneRif__30224|GPR172A|79581|No_GeneRif__30225|GPR172B|55065|No_GeneRif__18510|GPRC6A|222545|Complete__19719|LGR6|59352|No_GeneRif__14298|LPAR3|23566|Complete__17962|MRGPRX1|259249|No_GeneRif__17980|MRGPRX3|117195|Complete__17617|MRGPRX4|117196|No_GeneRif__13300|GPR61|83873|Complete__<>AvaiableGeneRif=9<>BEST:14298|LPAR3|0.00104185486299307<>ScoreDetail__23624|GPR151|0.000317073170731707__17980|MRGPRX3|0.00021680216802168__19680|GPBAR1|0.000982292014700969__18510|GPRC6A|0.0004516711833785__13300|GPR61|0.000670731707317073__18274|CYSLTR2|0.000692855601122383__14298|LPAR3|0.00104185486299307__4042|FZD4|0.000587427001030574__24884|OXER1|0.00061617458279846__ 0 0 0 0 0 59269 17582695 74958 20996 11179 SOD1 ALS ALS 18 0.5 in cultured spinal motor neurons indicating a possible role in ALS treatment 59 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 59270 17582695 74958 567 877 ALDH7A1 PDE PDE 0 0.0 PDE inhibitors have been found to be neuroprotective in cultured spinal 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 59271 17582695 74959 567 877 ALDH7A1 PDE PDE 0 0.0 PDE inhibitors are also being considered as novel therapies for MS 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 59273 17582695 74966 20996 11179 SOD1 ALS ALS 5 0.5 Diseases such as MS and ALS may represent related conditions resulting from variation in expression of 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000778010267622989<>ScoreDetail__5468|IGFALS|0.000516679348796137__11179|SOD1|0.000778010267622989__ 0 0 0 0 0 46960 17597167 59385 872 583 APC APC APCs 15 0.0 of immunocompetent cells such as lymphocytes and antigen-presenting cells (APCs), APCs that includes stimulation of their production of cytokines chemotactic agents 13 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 46975 17597167 59396 9590 5164 HPSE HPA HPA 8 0.0 such as IL-1 also activate the hypothalamo_amp_#x2013 pituitary_amp_#x2013 adrenal (HPA)-axis HPA -axis (see see 3 resulting in the release of corticotrophin-releasing 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 46977 17597167 59398 10676 6121 IRF6 LPS LPS 20 0.3 adrenal gland constitutively as well as inducible by lipopolysaccharides (LPS) LPS 4 provides another source of agonists as well as antagonists 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 46981 17597167 59407 9947 5468 IGFALS ALS ALS 28 0.3 as Alzheimer's disease (AD), AD epilepsy amyotrophic lateral sclerosis (ALS) ALS and Parkinson's disease as well as diseases with autoimmune characteristics 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000450260721008533<>ScoreDetail__5468|IGFALS|0.000337695077597634__11179|SOD1|0.000450260721008533__ 0 0 0 0 0 46982 17597167 59408 18723 10261 ROS1 ROS ROS 28 0.0 such as nitric oxide (NO), NO reactive oxygen species (ROS), ROS glutamate quinolinic acid and proteolytic enzymes are thus common features 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 47003 17597167 59436 11629 6493 LAMC2 CSF CSF 20 0.0 factors in post mortem brain tissue and cerebrospinal fluid (CSF) CSF samples from AD patients represent evidence for an inflammatory reaction 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 47014 17597167 59442 353 245 ADD3 ADDL ADDLs 15 0.0 indicate that A_amp_#x3b2 oligomers or A_amp_#x3b2 -derived diffusible ligands (ADDLs), ADDLs may interfere with synaptic transmission and cause neurotoxicity 33 34 13 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 47015 17597167 59443 9905 5438 IFNG IFN IFN-G 19 0.0 1_amp_#x2013 42 stimulated an increased release of the inflammatory cytokines IFN-_amp_#x3b3 IL-1_amp_#x3b1 and IL-1_amp_#x3b2 30 may support the involvement of these 11 JUMiner_v2.2 1 0 0 2 5417 TotalCon:2<>5438|IFNG|3458|Complete__5417|IFNA1|3439|Complete__<>AvaiableGeneRif=2<>BEST:5417|IFNA1|0.00050621058468952<>ScoreDetail__5438|IFNG|0.000402004662223399__5417|IFNA1|0.00050621058468952__ 0 0 0 0 0 47017 17597167 59444 11629 6493 LAMC2 CSF CSF 5 0.0 The levels of sIL-1RII in CSF were increased in AD patients with moderate cognitive dysfunction 37 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 47026 17597167 59461 9659 18646 HSD17B12 KAR KA-receptor 18 0.0 systemic administration of KA is mediated not only by the KA-receptor subtype of glutamate receptors but also indirectly by the release 11 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 47028 17597167 59462 4877 2322 CPP CPP CPP 8 0.0 fact the NMDA-receptor antagonists MK-801 (dizocilpine) dizocilpine and (R)-CPP R -CPP reduced KA-induced expression of IL-1_amp_#x3b2 and IL-1ra 47 indicating that 11 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 47048 17597167 59484 3353 1368 CA1 CA1 CA1 21 0.0 a 75% larger number of viable neurons in the hippocampal CA1 pyramidal cell layer as compared to saline-treated rats 62 ( 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 47052 17597167 59487 3353 1368 CA1 CA1 CA1 21 0.0 and the rescuing effect seen by stereological analysis of the CA1 pyramidal cell layer 65 was accompanied by a reduction in 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 47060 17597167 59506 3353 1368 CA1 CA1 CA1 14 0.0 violet-stained sections of the rat hippocampus showing part of the CA1 pyramidal cell layer after (A) A sham surgery (B) B 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 51654 17678953 64372 18723 10261 ROS1 ROS ROS 14 0.0 as nitric oxide (NO) NO and reactive oxygen species (ROS), ROS can contribute to neurodegenerative diseases in part by triggering protein 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 51655 17678953 64374 20996 11179 SOD1 ALS ALS 39 0.0 ranging from Parkinson's disease (PD), PD amyotrophic lateral sclerosis (ALS), ALS multiple sclerosis and Alzheimer's disease (AD) AD to stroke and 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000568982184781108<>ScoreDetail__5468|IGFALS|0.000370578326782706__11179|SOD1|0.000568982184781108__ 0 0 0 0 0 51656 17678953 64375 18723 10261 ROS1 ROS ROS 36 0.0 ion channel and subsequent free radical production including NO and ROS 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 51659 17678953 64388 1442 905 AXL UFO UFO 9 0.0 these Uncompetitive/Fast Uncompetitive Fast Off-rate therapeutics we use the term UFO drugs because like Unidentified Flying Objects they leave very quickly 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 51661 17678953 64396 1442 905 AXL UFO UFO 16 0.0 can be achieved by coupling NO to memantine yielding second-generation UFO drugs known as NitroMemantines 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 43599 17852013 55125 20996 11179 SOD1 ALS ALS 12 0.0 been implicated in the pathogenesis of amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00124340580038119<>ScoreDetail__5468|IGFALS|0.0011449835408616__11179|SOD1|0.00124340580038119__ 0 0 0 0 0 43601 17852013 55127 10471 6026 IL8RA C-C C-C 11 0.0 activation normal T-cell expressed and secreted (RANTES) RANTES is a C-C beta-chemokine with strong chemo-attractant activity for T-lymphocytes and monocytes 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 43605 17852013 55128 20996 11179 SOD1 ALS ALS 13 0.0 of RANTES in 20 patients with amyotrophic lateral sclerosis (ALS), ALS 14 patients with non-inflammatory neurological disorders (NIND) NIND and 13 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00124340580038119<>ScoreDetail__5468|IGFALS|0.0011449835408616__11179|SOD1|0.00124340580038119__ 0 0 0 0 0 43606 17852013 55128 5131 2524 CTRL CTRL CTRL 25 0.0 non-inflammatory neurological disorders (NIND) NIND and 13 control subjects (CTRL) CTRL and cerebrospinal fluid (CSF) CSF levels of RANTES in ALS 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 43607 17852013 55128 11629 6493 LAMC2 CSF CSF 29 0.0 and 13 control subjects (CTRL) CTRL and cerebrospinal fluid (CSF) CSF levels of RANTES in ALS and NIND group patients in 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 43608 17852013 55128 20996 11179 SOD1 ALS ALS 34 0.1 CTRL and cerebrospinal fluid (CSF) CSF levels of RANTES in ALS and NIND group patients in order to investigate whether RANTES 6 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00124340580038119<>ScoreDetail__5468|IGFALS|0.0011449835408616__11179|SOD1|0.00124340580038119__ 0 0 0 0 0 43609 17852013 55128 20996 11179 SOD1 ALS ALS 53 0.0 whether RANTES as index of immune activation is present in ALS patients 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00124340580038119<>ScoreDetail__5468|IGFALS|0.0011449835408616__11179|SOD1|0.00124340580038119__ 0 0 0 0 0 43611 17852013 55129 20996 11179 SOD1 ALS ALS 2 0.0 Patients with ALS had higher RANTES levels compared with the NIND patients and 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00124340580038119<>ScoreDetail__5468|IGFALS|0.0011449835408616__11179|SOD1|0.00124340580038119__ 0 0 0 0 0 43612 17852013 55129 5131 2524 CTRL CTRL CTRL 13 0.0 had higher RANTES levels compared with the NIND patients and CTRL subjects (p p = 0.005 and p = 0.02 respectively 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 43614 17852013 55130 11629 6493 LAMC2 CSF CSF 0 0.2 CSF RANTES levels were also higher compared with the NIND patients 5 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 43616 17852013 55131 11629 6493 LAMC2 CSF CSF 5 0.2 No correlation of serum and CSF RANTES levels with disease duration was found 5 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 43617 17852013 55132 20996 11179 SOD1 ALS ALS 18 0.0 recruitment of peripheral inflammatory cells to sites of inflammation in ALS patients 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00124340580038119<>ScoreDetail__5468|IGFALS|0.0011449835408616__11179|SOD1|0.00124340580038119__ 0 0 0 0 0 43674 17853944 55213 20996 11179 SOD1 ALS ALS 4 2.2 Abstract Amyotrophic lateral sclerosis (ALS), ALS one of the most common adult-onset neurodegenerative diseases has no 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43675 17853944 55214 20996 11179 SOD1 ALS ALS 12 2.2 stress and inflammation have been associated with the pathoprogression of ALS through a poorly defined mechanism 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43676 17853944 55215 20996 11179 SOD1 ALS ALS 8 2.2 Here we determined that dysregulated redox stress in ALS mice caused by NADPH oxidases Nox1 and Nox2 significantly influenced 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43683 17853944 55218 20996 11179 SOD1 ALS ALS 2 2.2 Interestingly female ALS mice containing only 1 active X-linked Nox1 or Nox2 gene 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43687 17853944 55219 20996 11179 SOD1 ALS ALS 9 2.2 Nox activity in spinal cords from Nox2 heterozygous female ALS mice was approximately 50% that of WT female ALS mice 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43688 17853944 55219 20996 11179 SOD1 ALS ALS 18 2.2 female ALS mice was approximately 50% that of WT female ALS mice suggesting that random X-inactivation was not influenced by Nox2 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43690 17853944 55220 20996 11179 SOD1 ALS ALS 19 2.2 spinal cord significantly delayed onset of motor neuron disease in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43691 17853944 55221 20996 11179 SOD1 ALS ALS 15 2.2 believe to be new modifier gene targets for treatment of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43692 17853944 55223 20996 11179 SOD1 ALS ALS 3 2.2 Amyotrophic lateral sclerosis (ALS) ALS is a fatal neurodegenerative disease that can be caused by 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43694 17853944 55224 20996 11179 SOD1 ALS ALS 13 2.2 as to the precise mechanism of motor neuron death in ALS although oxidative stress and inflammation are both believed to be 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43696 17853944 55225 20996 11179 SOD1 ALS ALS 10 2.2 Transgenic mice overexpressing a mutant form of SOD1 found in ALS patients (SOD1 SOD1 G93A develop motor neuron disease similar to 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43698 17853944 55225 20996 11179 SOD1 ALS ALS 28 2.2 disease similar to that seen clinically in familial forms of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43702 17853944 55229 20996 11179 SOD1 ALS ALS 13 2.2 thought to be an important component of disease progression in ALS ( 3 7 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43704 17853944 55230 20996 11179 SOD1 ALS ALS 8 2.2 Indeed recent studies have shown that SOD1 G93A ALS transgenic mice produce elevated levels of Nox2 gp91phox and superoxide 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43719 17853944 55234 20996 11179 SOD1 ALS ALS 15 2.2 other Nox genes may more significantly influence redox stress in ALS disease 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43728 17853944 55236 20996 11179 SOD1 ALS ALS 22 2.2 Nox1 deletion on disease progression in mixed hybrid SOD1 G93A ALS mice 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43729 17853944 55237 20202 10964 SLC22A18 HET HET 32 0.6 Y and female (WT, WT Nox X+/X+ X X heterozygous HET Nox X+/X_amp_#x02013; X X_amp_#x02013 and KO Nox X_amp_#x02013;/X_amp_#x02013; X_amp_#x02013 X_amp_#x02013 1 JUMiner_v2.2 1 2 UserEdit 0 2 10520 TotalCon:2<>10520|SAFB|6294|Complete__10964|SLC22A18|5002|Complete__<>AvaiableGeneRif=2<>BEST:10520|SAFB|0.000455539358600583<>ScoreDetail__10520|SAFB|0.000455539358600583__10964|SLC22A18|0.000385868633167553__ 1 1 0 0 0 43734 17853944 55239 20996 11179 SOD1 ALS ALS 32 2.2 neuron disease in a SOD1 G93A transgenic mouse model of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43735 17853944 55240 20996 11179 SOD1 ALS ALS 2 2.2 Interestingly female ALS mice lacking a single copy of the X-chromosomal Nox1 or 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43740 17853944 55241 20996 11179 SOD1 ALS ALS 26 2.2 or Nox2 -expressing cells has a substantial therapeutic benefit in ALS mice 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43741 17853944 55242 20996 11179 SOD1 ALS ALS 14 2.2 multiple Nox genes appear to contribute to the pathoprogression of ALS and expand potential therapeutic targets for this disease 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43743 17853944 55246 20996 11179 SOD1 ALS ALS 18 2.2 G93A mutant ( 22 were used as a model of ALS strain name B6SJL-Tg( B6SJL-Tg SOD1 G93A )1Gur/J; 1Gur J stock 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43754 17853944 55253 20202 10964 SLC22A18 HET HET 27 0.6 to obtain all possible genotypes in each sex ( Nox -HET males were the only genotype not attainable 1 JUMiner_v2.2 1 2 UserEdit 0 2 10520 TotalCon:2<>10520|SAFB|6294|Complete__10964|SLC22A18|5002|Complete__<>AvaiableGeneRif=2<>BEST:10520|SAFB|0.000455539358600583<>ScoreDetail__10520|SAFB|0.000455539358600583__10964|SLC22A18|0.000385868633167553__ 1 1 0 0 0 43758 17853944 55255 20202 10964 SLC22A18 HET HET 1 0.6 Nox -HET females were used for the next round of breeding against 1 JUMiner_v2.2 1 2 UserEdit 0 2 10520 TotalCon:2<>10520|SAFB|6294|Complete__10964|SLC22A18|5002|Complete__<>AvaiableGeneRif=2<>BEST:10520|SAFB|0.000455539358600583<>ScoreDetail__10520|SAFB|0.000455539358600583__10964|SLC22A18|0.000385868633167553__ 1 1 0 0 0 43766 17853944 55255 20202 10964 SLC22A18 HET HET 50 0.6 mixed litters containing Nox -KO (male male and female Nox -HET (female female only and Nox -WT (male male only genotypes 1 JUMiner_v2.2 1 2 UserEdit 0 2 10520 TotalCon:2<>10520|SAFB|6294|Complete__10964|SLC22A18|5002|Complete__<>AvaiableGeneRif=2<>BEST:10520|SAFB|0.000455539358600583<>ScoreDetail__10520|SAFB|0.000455539358600583__10964|SLC22A18|0.000385868633167553__ 1 1 0 0 0 43768 17853944 55256 20202 10964 SLC22A18 HET HET 2 0.6 Similarly Nox -HET females were also bred against SOD1 G93A hemizygous Nox -WT 1 JUMiner_v2.2 1 2 UserEdit 0 2 10520 TotalCon:2<>10520|SAFB|6294|Complete__10964|SLC22A18|5002|Complete__<>AvaiableGeneRif=2<>BEST:10520|SAFB|0.000455539358600583<>ScoreDetail__10520|SAFB|0.000455539358600583__10964|SLC22A18|0.000385868633167553__ 1 1 0 0 0 43776 17853944 55256 20202 10964 SLC22A18 HET HET 45 0.6 to mixed litters containing Nox -KO (male male only Nox -HET (female female only and Nox -WT (male male and female 1 JUMiner_v2.2 1 2 UserEdit 0 2 10520 TotalCon:2<>10520|SAFB|6294|Complete__10964|SLC22A18|5002|Complete__<>AvaiableGeneRif=2<>BEST:10520|SAFB|0.000455539358600583<>ScoreDetail__10520|SAFB|0.000455539358600583__10964|SLC22A18|0.000385868633167553__ 1 1 0 0 0 43790 17853944 55269 10452 6001 IL2 IL2 IL2 15 0.0 the difference between the human SOD1 CT and the mouse IL2 CT for all mice in the Nox2 F2 generation 10 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 43797 17853944 55276 20202 10964 SLC22A18 HET HET 19 0.6 presymptomatic weight exceeded 40 g 2 Nox2 -WT 1 Nox2 -HET and 1 Nox2 -KO 1 JUMiner_v2.2 1 2 UserEdit 0 2 10520 TotalCon:2<>10520|SAFB|6294|Complete__10964|SLC22A18|5002|Complete__<>AvaiableGeneRif=2<>BEST:10520|SAFB|0.000455539358600583<>ScoreDetail__10520|SAFB|0.000455539358600583__10964|SLC22A18|0.000385868633167553__ 1 1 0 0 0 43805 17853944 55285 20202 10964 SLC22A18 HET HET 4 0.6 Eye infection in Nox2 -HET females hemizygous for the SOD1 G93A transgene was only observed 1 JUMiner_v2.2 1 2 UserEdit 0 2 10520 TotalCon:2<>10520|SAFB|6294|Complete__10964|SLC22A18|5002|Complete__<>AvaiableGeneRif=2<>BEST:10520|SAFB|0.000455539358600583<>ScoreDetail__10520|SAFB|0.000455539358600583__10964|SLC22A18|0.000385868633167553__ 1 1 0 0 0 43809 17853944 55312 15877 8512 OTC OTC OTC 4 0.0 Segments were embedded in OTC freezing medium and sectioned axially at 20 _amp_#x003bc m at 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 43818 17853944 55332 20996 11179 SOD1 ALS ALS 12 2.2 enhanced redox stress has been associated with disease progression in ALS mouse models we sought to evaluate 2 potential Nox genes 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43819 17853944 55332 18723 10261 ROS1 ROS ROS 25 0.3 we sought to evaluate 2 potential Nox genes responsible for ROS generation in hemizygous SOD1 G93A transgenic mice and their affect 3 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 43824 17853944 55333 20996 11179 SOD1 ALS ALS 14 2.2 -KO and Nox2 -KO mice to hemizygous male SOD1 G93A ALS mice (Supplemental Supplemental Figures 1 and 2 supplemental material available 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43840 17853944 55338 20996 11179 SOD1 ALS ALS 15 2.2 or Nox2 significantly delayed the death of hemizygous SOD1 G93A ALS mice (Figure Figure 1 A 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43854 17853944 55344 20996 11179 SOD1 ALS ALS 3 2.2 Enhanced survival of ALS Nox2 -KO mice correlated with higher motor neuron counts in 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43865 17853944 55349 20996 11179 SOD1 ALS ALS 21 2.2 decreased motor neuron disease in male and female Nox2 -KO ALS mice (Figure Figure 3 B_amp_#x02013 D 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43866 17853944 55350 20996 11179 SOD1 ALS ALS 20 2.2 by hind-limb muscle atrophy a hallmark of disease progression in ALS mice 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43882 17853944 55358 20996 11179 SOD1 ALS ALS 14 2.2 C57BL/6 C57BL 6 modifier genes can slow disease progression in ALS mice 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43911 17853944 55368 20202 10964 SLC22A18 HET HET 2 0.6 Interestingly Nox2 -HET female ALS mice also demonstrated significant increases in survival ( 1 JUMiner_v2.2 1 2 UserEdit 0 2 10520 TotalCon:2<>10520|SAFB|6294|Complete__10964|SLC22A18|5002|Complete__<>AvaiableGeneRif=2<>BEST:10520|SAFB|0.000455539358600583<>ScoreDetail__10520|SAFB|0.000455539358600583__10964|SLC22A18|0.000385868633167553__ 1 1 0 0 0 43912 17853944 55368 20996 11179 SOD1 ALS ALS 4 2.2 Interestingly Nox2 -HET female ALS mice also demonstrated significant increases in survival ( Nox2 -WT 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43915 17853944 55368 20202 10964 SLC22A18 HET HET 18 0.6 significant increases in survival ( Nox2 -WT 132 days Nox2 -HET 186 days Figure 1 A and Figure 3 A although 1 JUMiner_v2.2 1 2 UserEdit 0 2 10520 TotalCon:2<>10520|SAFB|6294|Complete__10964|SLC22A18|5002|Complete__<>AvaiableGeneRif=2<>BEST:10520|SAFB|0.000455539358600583<>ScoreDetail__10520|SAFB|0.000455539358600583__10964|SLC22A18|0.000385868633167553__ 1 1 0 0 0 43917 17853944 55369 20202 10964 SLC22A18 HET HET 14 0.6 limited but significant heterozygous effect on increased survival in Nox1 -HET female ALS mice (Figure Figure 1 A 1 JUMiner_v2.2 1 2 UserEdit 0 2 10520 TotalCon:2<>10520|SAFB|6294|Complete__10964|SLC22A18|5002|Complete__<>AvaiableGeneRif=2<>BEST:10520|SAFB|0.000455539358600583<>ScoreDetail__10520|SAFB|0.000455539358600583__10964|SLC22A18|0.000385868633167553__ 1 1 0 0 0 43918 17853944 55369 20996 11179 SOD1 ALS ALS 16 2.2 significant heterozygous effect on increased survival in Nox1 -HET female ALS mice (Figure Figure 1 A 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43920 17853944 55370 20202 10964 SLC22A18 HET HET 21 0.6 the finding of decreased motor neuron disease in female Nox2 -HET ALS mice (Figure Figure 3 B_amp_#x02013 D 1 JUMiner_v2.2 1 2 UserEdit 0 2 10520 TotalCon:2<>10520|SAFB|6294|Complete__10964|SLC22A18|5002|Complete__<>AvaiableGeneRif=2<>BEST:10520|SAFB|0.000455539358600583<>ScoreDetail__10520|SAFB|0.000455539358600583__10964|SLC22A18|0.000385868633167553__ 1 1 0 0 0 43921 17853944 55370 20996 11179 SOD1 ALS ALS 22 2.2 finding of decreased motor neuron disease in female Nox2 -HET ALS mice (Figure Figure 3 B_amp_#x02013 D 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43927 17853944 55375 20202 10964 SLC22A18 HET HET 8 0.6 Given the significant protective effect seen in Nox2 -HET female mice we sought to determine how dosage of Nox2 1 JUMiner_v2.2 1 2 UserEdit 0 2 10520 TotalCon:2<>10520|SAFB|6294|Complete__10964|SLC22A18|5002|Complete__<>AvaiableGeneRif=2<>BEST:10520|SAFB|0.000455539358600583<>ScoreDetail__10520|SAFB|0.000455539358600583__10964|SLC22A18|0.000385868633167553__ 1 1 0 0 0 43929 17853944 55375 20996 11179 SOD1 ALS ALS 29 2.2 activity in the spinal cord might influence disease progression in ALS mice 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43931 17853944 55376 20202 10964 SLC22A18 HET HET 14 0.6 disease Nox activity in the spinal cords of female Nox2 -HET SOD1 G93A mice fell between that of female Nox2 -KO 1 JUMiner_v2.2 1 2 UserEdit 0 2 10520 TotalCon:2<>10520|SAFB|6294|Complete__10964|SLC22A18|5002|Complete__<>AvaiableGeneRif=2<>BEST:10520|SAFB|0.000455539358600583<>ScoreDetail__10520|SAFB|0.000455539358600583__10964|SLC22A18|0.000385868633167553__ 1 1 0 0 0 43937 17853944 55377 20202 10964 SLC22A18 HET HET 10 0.6 This suggests that X-inactivation likely occurs randomly in female Nox2 -HET SOD1 G93A mice with about 50% of the microglia and 1 JUMiner_v2.2 1 2 UserEdit 0 2 10520 TotalCon:2<>10520|SAFB|6294|Complete__10964|SLC22A18|5002|Complete__<>AvaiableGeneRif=2<>BEST:10520|SAFB|0.000455539358600583<>ScoreDetail__10520|SAFB|0.000455539358600583__10964|SLC22A18|0.000385868633167553__ 1 1 0 0 0 43941 17853944 55378 20996 11179 SOD1 ALS ALS 21 2.2 the spinal cord has a significant impact on survival of ALS mice 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43948 17853944 55382 20996 11179 SOD1 ALS ALS 6 2.2 It has been postulated that the ALS phenotype is at least partially dictated by an altered redox-balance 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43951 17853944 55384 20996 11179 SOD1 ALS ALS 16 2.2 findings our current data demonstrating significantly enhanced survival in female ALS mice with chimeric Nox2 expression suggest that SOD1 G93A expression 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43961 17853944 55390 20996 11179 SOD1 ALS ALS 5 2.2 Importantly antibiotic treatment of control ALS mice on the WT Nox2 background did not alter either 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43984 17853944 55407 20996 11179 SOD1 ALS ALS 13 2.2 cannot explain why the infection was only present in the ALS Nox2 -KO mice 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43986 17853944 55411 18723 10261 ROS1 ROS ROS 13 0.3 microglia can lead to the production of proinflammatory cytokines and ROS which have been associated with neuroinflammation that can further perpetuate 3 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 43987 17853944 55412 18723 10261 ROS1 ROS ROS 7 0.3 Among the factors produced by activated microglia ROS could potentially enhance neurodegeneration by at least 2 mechanisms 3 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 43988 17853944 55413 18723 10261 ROS1 ROS ROS 1 0.3 First ROS can cause direct damage to neurons 3 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 43989 17853944 55414 18723 10261 ROS1 ROS ROS 7 0.3 Second increases in the intracellular concentrations of ROS may activate pro-inflammatory signaling cascades that result in the activation 3 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 43990 17853944 55415 20996 11179 SOD1 ALS ALS 15 2.2 there is an upregulation of microglia during the progression of ALS disease and that in Nox2 -KO mice there is a 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 43992 17853944 55415 10676 6121 IRF6 LPS LPS 35 0.3 a marked decrease in the number of activated microglia following LPS treatment ( 21 1 JUMiner_v2.2 1 2 UserEdit 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 1 1 0 0 0 43993 17853944 55416 18723 10261 ROS1 ROS ROS 3 0.3 This suggests that ROS generated from NADPH oxidases play a role in signaling events 3 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 43994 17853944 55417 20996 11179 SOD1 ALS ALS 15 2.2 to determine the effect of NADPH oxidase_amp_#x02013 derived superoxide in ALS disease progression in transgenic mice 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 44000 17853944 55420 5281 2578 CYBB NOX2 Nox2-inactive 19 2.0 heterozygous for the Nox2 X-linked gene and hence containing 50% Nox2-inactive cells suggest that the interplay between Nox-activated microglia and neuronal 15 JUMiner_v2.2 1 2 32 0 0 0 0 0 0 0 0 44001 17853944 55420 20996 11179 SOD1 ALS ALS 33 2.2 the interplay between Nox-activated microglia and neuronal cell types in ALS may be more complex than previously thought 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 44004 17853944 55424 20996 11179 SOD1 ALS ALS 11 2.2 genetic background has previously been shown to influence survival of ALS mice ( 13 and this could have accounted for the 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 44007 17853944 55425 20996 11179 SOD1 ALS ALS 17 2.2 seen in the Nox1 -KO compared with the Nox2 -KO ALS mice would suggest that modifier genes must act in concert 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 44010 17853944 55426 20996 11179 SOD1 ALS ALS 13 2.2 of additional modifier genes that may influence Nox2 function in ALS would be particularly relevant to human ALS disease which manifests 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 44011 17853944 55426 20996 11179 SOD1 ALS ALS 20 2.2 Nox2 function in ALS would be particularly relevant to human ALS disease which manifests considerable phenotypic variability 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 44012 17853944 55428 20996 11179 SOD1 ALS ALS 9 2.2 First we believe the demonstrated increase in survival of ALS mice is the largest ever reported as a consequence of 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 44017 17853944 55429 20996 11179 SOD1 ALS ALS 21 2.2 gene ( Nox1 and Nox2 can influence disease progression in ALS mice 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 44018 17853944 55430 20996 11179 SOD1 ALS ALS 19 2.2 deletions have been shown to significantly delay disease progression in ALS mice (i.e., i.e. survival index 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 44019 17853944 55431 20996 11179 SOD1 ALS ALS 5 2.2 Finally our findings in female ALS mice suggest that a 50% reduction in Nox2 activity can 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 44022 17853944 55431 20996 11179 SOD1 ALS ALS 29 2.2 progression of disease in this SOD1 G93A transgenic model of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 44023 17853944 55432 20996 11179 SOD1 ALS ALS 17 2.2 Nox pathways using pharmacologic-based approaches could provide significant benefits for ALS patients 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 44024 17853944 55437 20996 11179 SOD1 ALS ALS 4 2.2 Footnotes Nonstandard abbreviations used ALS amyotrophic lateral sclerosis CT threshold cycle HET heterozygous SOD superoxide 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 44025 17853944 55437 20202 10964 SLC22A18 HET HET 11 0.6 Nonstandard abbreviations used ALS amyotrophic lateral sclerosis CT threshold cycle HET heterozygous SOD superoxide dismutase 1 JUMiner_v2.2 1 2 UserEdit 0 2 10520 TotalCon:2<>10520|SAFB|6294|Complete__10964|SLC22A18|5002|Complete__<>AvaiableGeneRif=2<>BEST:10520|SAFB|0.000455539358600583<>ScoreDetail__10520|SAFB|0.000455539358600583__10964|SLC22A18|0.000385868633167553__ 1 1 0 0 0 44029 17853944 55441 20996 11179 SOD1 ALS ALS 18 2.2 ( Nox1 or Nox2 enhances survival and survival index in ALS mice and significantly reduces superoxide production in spinal cords of 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 44035 17853944 55443 20996 11179 SOD1 ALS ALS 11 2.2 3 Disease phenotyping of Nox2 genotypes on the SOD1 G93A ALS background 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00177027188415898<>ScoreDetail__5468|IGFALS|0.0008079344737282__11179|SOD1|0.00177027188415898__ 0 0 0 0 0 45275 17896980 57308 9947 5468 IGFALS ALS ALS 23 0.3 and the immune system such as amyotrophic lateral sclerosis (ALS), ALS Alzheimer's disease (AD), AD neuropathy pain allergic bronchial asthma (BA) 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00061616799804828<>ScoreDetail__5468|IGFALS|0.000489585187822681__11179|SOD1|0.00061616799804828__ 0 0 0 0 0 46161 17908040 58285 20996 11179 SOD1 ALS ALS 24 0.0 cell death in AD PD and amyotrophic lateral sclerosis (ALS) ALS as well as several other CNS complications 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000555587013653184<>ScoreDetail__5468|IGFALS|0.00026542800265428__11179|SOD1|0.000555587013653184__ 0 0 0 0 0 38593 17969353 48250 9947 5468 IGFALS ALS ALS 8 0.3 Gene expression profile of spinal ventral horn in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00103931458879183<>ScoreDetail__5468|IGFALS|0.00073946853680645__11179|SOD1|0.00103931458879183__ 0 0 0 0 0 38594 17969353 48251 9947 5468 IGFALS ALS ALS 8 0.3 The causative pathomechanism of sporadic amyotrophic lateral sclerosis (ALS) ALS is not clearly understood 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00103931458879183<>ScoreDetail__5468|IGFALS|0.00073946853680645__11179|SOD1|0.00103931458879183__ 0 0 0 0 0 38595 17969353 48252 9947 5468 IGFALS ALS ALS 26 0.3 well as spinal ventral horn from autopsied patients with sporadic ALS were examined 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00103931458879183<>ScoreDetail__5468|IGFALS|0.00073946853680645__11179|SOD1|0.00103931458879183__ 0 0 0 0 0 38603 17969353 48258 22568 11905 TNFRSF10B DR5 DR5 8 0.0 Promoters for cell death pathway death receptor 5 (DR5), DR5 cyclins C (CCNC) CCNC and A1 (CCNA), CCNA and caspases 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 38604 17969353 48258 3793 1581 CCNC CCNC CCNC 11 0.0 death pathway death receptor 5 (DR5), DR5 cyclins C (CCNC) CCNC and A1 (CCNA), CCNA and caspases were upregulated whereas cell 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 38605 17969353 48259 13346 7178 MMRN1 ECM ECM 18 0.0 cell surface antigens/receptors, antigens receptors transcription and cell adhesion/ECM adhesion ECM were increased 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 38607 17969353 48262 9947 5468 IGFALS ALS ALS 18 0.3 from early DCTN1 downregulation to late CCNC upregulation in sporadic ALS can provide direct information on the genes leading to neurodegeneration 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00103931458879183<>ScoreDetail__5468|IGFALS|0.00073946853680645__11179|SOD1|0.00103931458879183__ 0 0 0 0 0 38608 17969353 48262 3793 1581 CCNC CCNC CCNC 14 0.0 neuron-specific gene expression changes from early DCTN1 downregulation to late CCNC upregulation in sporadic ALS can provide direct information on the 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 27677 17997855 32892 20996 11179 SOD1 ALS ALS 13 1.9 the course of neurodegenerative diseases including amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00179627854242123<>ScoreDetail__5468|IGFALS|0.000471355078514289__11179|SOD1|0.00179627854242123__ 0 0 0 0 0 27679 17997855 32893 20996 11179 SOD1 ALS ALS 15 1.9 superoxide dismutase (EC EC 1.15.1.1 SOD1 are associated with familial ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00179627854242123<>ScoreDetail__5468|IGFALS|0.000471355078514289__11179|SOD1|0.00179627854242123__ 0 0 0 0 0 27681 17997855 32895 20996 11179 SOD1 ALS ALS 14 1.9 transfected with the G93A mutant of SOD1 typical for familial ALS (G93A-SOD1) G93A-SOD1 and SH-SY5Y neuroblastoma cells transfected with wildtype SOD1 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00179627854242123<>ScoreDetail__5468|IGFALS|0.000471355078514289__11179|SOD1|0.00179627854242123__ 0 0 0 0 0 27683 17997855 32895 5021 2444 CSK CSK CSK 50 0.0 S -lysyl- S -lysine _amp_#x000d7 3 HCl (Pam Pam 3 CSK 4 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 27685 17997855 32899 20996 11179 SOD1 ALS ALS 14 1.9 transfected with the G93A mutant of SOD1 typical for familial ALS (G93A-SOD1) G93A-SOD1 were more vulnerable to the neurotoxic action of 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00179627854242123<>ScoreDetail__5468|IGFALS|0.000471355078514289__11179|SOD1|0.00179627854242123__ 0 0 0 0 0 27687 17997855 32899 5021 2444 CSK CSK CSK 35 0.0 and to the attack of monocytes stimulated by Pam 3 CSK 4 than SH-SY5Y cells transfected with wild-type human SOD1 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 27688 17997855 32903 20996 11179 SOD1 ALS ALS 21 1.9 inflammation may be partly responsible for the clinical deterioration of ALS patients during infections 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00179627854242123<>ScoreDetail__5468|IGFALS|0.000471355078514289__11179|SOD1|0.00179627854242123__ 0 0 0 0 0 27689 17997855 32904 20996 11179 SOD1 ALS ALS 16 1.9 neuron disease and suggest early treatment of respiratory infections in ALS patients 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00179627854242123<>ScoreDetail__5468|IGFALS|0.000471355078514289__11179|SOD1|0.00179627854242123__ 0 0 0 0 0 27690 17997855 32906 20996 11179 SOD1 ALS ALS 23 1.9 Alzheimer's disease Parkinson's disease stroke and amyotrophic lateral sclerosis (ALS) ALS 1 2 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00179627854242123<>ScoreDetail__5468|IGFALS|0.000471355078514289__11179|SOD1|0.00179627854242123__ 0 0 0 0 0 27691 17997855 32908 20996 11179 SOD1 ALS ALS 8 1.9 In support of the link between infections and ALS an epidemiological study found evidence for infection with Mycoplasma spp 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00179627854242123<>ScoreDetail__5468|IGFALS|0.000471355078514289__11179|SOD1|0.00179627854242123__ 0 0 0 0 0 27692 17997855 32908 20996 11179 SOD1 ALS ALS 30 1.9 the blood of more than 80% of patients suffering from ALS and in less than 10% of age-matched control subjects 3 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00179627854242123<>ScoreDetail__5468|IGFALS|0.000471355078514289__11179|SOD1|0.00179627854242123__ 0 0 0 0 0 27693 17997855 32908 9401 16435 HM13 SPP spp 18 0.0 ALS an epidemiological study found evidence for infection with Mycoplasma spp in the blood of more than 80% of patients suffering 14 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 27694 17997855 32909 20996 11179 SOD1 ALS ALS 0 1.9 ALS is an ultimately lethal disease with a high inter-subject variation 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00179627854242123<>ScoreDetail__5468|IGFALS|0.000471355078514289__11179|SOD1|0.00179627854242123__ 0 0 0 0 0 27695 17997855 32911 20996 11179 SOD1 ALS ALS 0 1.9 ALS appears to be a multifactorial disease where motor neuron degradation 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00179627854242123<>ScoreDetail__5468|IGFALS|0.000471355078514289__11179|SOD1|0.00179627854242123__ 0 0 0 0 0 27697 17997855 32913 20996 11179 SOD1 ALS ALS 1 1.9 Clinically ALS occurs both sporadically and as a familial form 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00179627854242123<>ScoreDetail__5468|IGFALS|0.000471355078514289__11179|SOD1|0.00179627854242123__ 0 0 0 0 0 27698 17997855 32914 20996 11179 SOD1 ALS ALS 2 1.9 In 5_amp_#x02013 10% ALS is a familial disease and approximately 20% of the familial 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00179627854242123<>ScoreDetail__5468|IGFALS|0.000471355078514289__11179|SOD1|0.00179627854242123__ 0 0 0 0 0 27699 17997855 32914 20996 11179 SOD1 ALS ALS 13 1.9 is a familial disease and approximately 20% of the familial ALS cases are caused by a mutation in the gene encoding 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00179627854242123<>ScoreDetail__5468|IGFALS|0.000471355078514289__11179|SOD1|0.00179627854242123__ 0 0 0 0 0 27702 17997855 32917 20996 11179 SOD1 ALS ALS 9 1.9 Families with the G93A-SOD1 mutation are indistinguishable from sporadic ALS by clinical and pathologic criteria 5 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00179627854242123<>ScoreDetail__5468|IGFALS|0.000471355078514289__11179|SOD1|0.00179627854242123__ 0 0 0 0 0 27705 17997855 32920 20996 11179 SOD1 ALS ALS 9 1.9 A significant inflammatory component contributes to the pathology of ALS 7 8 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00179627854242123<>ScoreDetail__5468|IGFALS|0.000471355078514289__11179|SOD1|0.00179627854242123__ 0 0 0 0 0 27706 17997855 32921 20996 11179 SOD1 ALS ALS 17 1.9 and various cytokines and chemokines in the CNS tissue of ALS patients and mouse models 7 9 10 and the presence 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00179627854242123<>ScoreDetail__5468|IGFALS|0.000471355078514289__11179|SOD1|0.00179627854242123__ 0 0 0 0 0 27707 17997855 32921 20996 11179 SOD1 ALS ALS 45 1.9 cells as demonstrated in post mortem spinal cord tissue of ALS patients 10 11 and by positron emission tomography using 11 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00179627854242123<>ScoreDetail__5468|IGFALS|0.000471355078514289__11179|SOD1|0.00179627854242123__ 0 0 0 0 0 27708 17997855 32921 20996 11179 SOD1 ALS ALS 63 1.9 emission tomography using 11 C](R)-PK11195 C R -PK11195 in living ALS patients 12 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00179627854242123<>ScoreDetail__5468|IGFALS|0.000471355078514289__11179|SOD1|0.00179627854242123__ 0 0 0 0 0 27709 17997855 32922 20996 11179 SOD1 ALS ALS 13 1.9 activated microglial cells in the vicinity of neuronal death in ALS suggests that stimulants of microglial activation are produced by stressed 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00179627854242123<>ScoreDetail__5468|IGFALS|0.000471355078514289__11179|SOD1|0.00179627854242123__ 0 0 0 0 0 27712 17997855 32942 19573 10691 SDS SDS SDS-polyacrylamide 5 0.0 Toxin purity was assessed by SDS-polyacrylamide gel electrophoresis followed by Coomassie-blue staining which showed a single 11 JUMiner_v2.2 1 0 0 2 19440 TotalCon:2<>10691|SDS|10993|Complete__19440|SBDS|51119|Complete__<>AvaiableGeneRif=2<>BEST:19440|SBDS|0.000386094610941903<>ScoreDetail__10691|SDS|0.000132749236691889__19440|SBDS|0.000386094610941903__ 0 0 0 0 0 27717 17997855 32956 5021 2444 CSK CSK CSK 24 0.0 Cys-SKKKK _amp_#x000d7 3 HCl EMC Microcollections Tuebingen Germany Pam 3 CSK 4 22 in concentrations of 10 _amp_#x003bc;g/ml _amp_#x003bc g ml 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 27718 17997855 32957 23484 12446 TYRO3 BYK Byk 26 0.0 enzyme immunoassay (LIA) LIA using the Liaison _amp_#x000ae Analyser from Byk Sangtec and reagents from Diasorin (Dietzenbach, Dietzenbach Germany 2 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 27719 17997855 32963 19254 10472 RUNX2 CCD CCD 10 0.0 Changes in Ca 2 i were measured using a CCD camera system (TILL TILL Photonics Martinsried Germany 23 24 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 27720 17997855 32965 19254 10472 RUNX2 CCD CCD 1 0.0 The CCD camera displayed 12-bit dynamics and an A/D A D converter 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 27721 17997855 32973 20247 20116 SLC25A29 CACL CaCl 12 1.0 either RPMI-1640 or (in in mM NaCl 140 KCl 2 CaCl 2 2.5 MgCl 2 1 HEPES 10 glucose 40 and 14 JUMiner_v2.2 1 2 cacl 0 0 0 0 0 0 0 0 27722 17997855 32974 20247 20116 SLC25A29 CACL CaCl 11 1.0 nominally Ca 2 -free solutions MgCl 2 was substituted for CaCl 2 without adding EGTA 14 JUMiner_v2.2 1 2 cacl 0 0 0 0 0 0 0 0 27725 17997855 32977 20996 11179 SOD1 SOD1 SOD1 38 3.2 activated caspase-3 was used to detect apoptosis in pneumolysin-treated G93A SOD1 cells fixated cells were permeabilised with Triton X (0.1% 0.1% 1 JUMiner_v2.2 1 2 32 0 0 0 0 0 0 0 0 27728 17997855 32979 20996 11179 SOD1 SOD1 SOD1 34 3.2 staining of the somata of macrophages (CD68)/apoptotic CD68 apoptotic G93A SOD1 cells (Caspase Caspase 3 1 JUMiner_v2.2 1 2 32 0 0 0 0 0 0 0 0 27745 17997855 33017 5021 2444 CSK CSK CSK 22 0.0 of monocytes stimulated with the Toll-like receptor-2 agonist Pam 3 CSK 4 After stimulation of human neuroblastoma and macrophage co-cultures with 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 27746 17997855 33017 5021 2444 CSK CSK CSK 38 0.0 neuroblastoma and macrophage co-cultures with the TLR2 agonist Pam 3 CSK 4 for a period of 72 hours the release of 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 27748 17997855 33018 5021 2444 CSK CSK CSK 26 0.0 co-cultures with Wt-SOD1 SH-SY5Y cells after stimulation with Pam 3 CSK 4 (27.8 27.8 _amp_#x000b1 2.4% vs 19.0 _amp_#x000b1 3.3% p 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 27750 17997855 33026 20996 11179 SOD1 ALS ALS 24 1.9 transfected with the G93A mutant of SOD1 typical for familial ALS (G93A-SOD1) G93A-SOD1 are more vulnerable to infectious stimuli than neuroblastoma 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00179627854242123<>ScoreDetail__5468|IGFALS|0.000471355078514289__11179|SOD1|0.00179627854242123__ 0 0 0 0 0 27758 17997855 33050 20996 11179 SOD1 ALS ALS 10 1.9 Mitochondrial damage contributes to neuronal death both in inflammation and ALS 46 47 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00179627854242123<>ScoreDetail__5468|IGFALS|0.000471355078514289__11179|SOD1|0.00179627854242123__ 0 0 0 0 0 27764 17997855 33053 5021 2444 CSK CSK CSK 13 0.0 that activation of macrophages by the TLR2 agonist Pam 3 CSK 4 can also cause neuronal death and that neuroblastoma cells 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 27765 17997855 33057 20996 11179 SOD1 ALS ALS 2 1.9 In inherited ALS after an initial phase of the disease predominated by motor 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00179627854242123<>ScoreDetail__5468|IGFALS|0.000471355078514289__11179|SOD1|0.00179627854242123__ 0 0 0 0 0 27773 17997855 33088 20996 11179 SOD1 SOD1 SOD1 15 3.2 influx into G 93A-SOD1 neuroblastoma cells in comparison to wild-type SOD1 cells 1 JUMiner_v2.2 1 2 32 0 0 0 0 0 0 0 0 27774 17997855 33090 20996 11179 SOD1 SOD1 SOD1 15 3.2 influx into G 93A-SOD1 neuroblastoma cells in comparison to wild-type SOD1 cells 1 JUMiner_v2.2 1 2 32 0 0 0 0 0 0 0 0 27775 17997855 33092 20996 11179 SOD1 SOD1 SOD1 15 3.2 influx into G 93A-SOD1 neuroblastoma cells in comparison to wild-type SOD1 cells 1 JUMiner_v2.2 1 2 32 0 0 0 0 0 0 0 0 27779 17997855 33097 5021 2444 CSK CSK CSK 19 0.0 cells to the attack of monocytes stimulated with Pam 3 CSK 4 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 27782 17997855 33100 5021 2444 CSK CSK CSK 19 0.0 cells to the attack of monocytes stimulated with Pam 3 CSK 4 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 27783 17997855 33101 5021 2444 CSK CSK CSK 5 0.0 After staining of Pam 3 CSK 4 -stimulated co-cultures with light green and macrophage staining with 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 27784 17997855 33102 5021 2444 CSK CSK CSK 16 0.0 cells to the attack of monocytes stimulated with Pam 3 CSK 4 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 29808 18040778 35397 11629 6493 LAMC2 CSF CSF 18 0.0 the blood-brain barrier (BBB) BBB and blood-cerebral spinal fluid (CSF) CSF barrier as well as the presence of drug-specific transporters in 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 29809 18040778 35411 9006 4799 HADH HAD HAD 4 0.0 HIV infection HIV-associated dementia (HAD) HAD is typically a late manifestation of HIV infection and is 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 29810 18040778 35412 9006 4799 HADH HAD HAD 7 0.0 A key element in the development of HAD appears to be infection of microglia which are the only 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 29811 18040778 35413 9006 4799 HADH HAD HAD 18 0.0 and macrophages in the CNS is a better correlate with HAD than the presence and amount of HIV-1-infected cells in the 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 29812 18040778 35416 9006 4799 HADH HAD HAD 26 0.0 limited compared to the diffuse CNS abnormalities that occur in HAD (Lipton Lipton and Gendelman 1995 which suggests that diffusible factors 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 29815 18040778 35419 450 330 AGRP ART ART 3 0.0 Although antiretroviral therapy (ART) ART is extremely important in the control of HIV infection its 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 29816 18040778 35419 9006 4799 HADH HAD HAD 16 0.0 important in the control of HIV infection its role in HAD is less clear 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 29817 18040778 35420 450 330 AGRP ART ARTs 1 0.0 Specific ARTs such as efavirenz have been shown to inhibit HIV replication 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 29818 18040778 35421 10676 6121 IRF6 LPS LPS 11 0.3 indinavir and zidovudine have been shown to inhibit lipopolysaccharide (LPS)-stimulated LPS -stimulated microglial production of matrix metalloproteinase (MMP)-9, MMP -9 thereby 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 29819 18040778 35422 9006 4799 HADH HAD HAD 11 0.0 with activity against HIV may not be enough to impact HAD 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 29820 18040778 35423 9006 4799 HADH HAD HAD 13 0.0 microglia release neurotoxins which may ultimately be more important in HAD than viral replication per se 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 29821 18040778 35424 450 330 AGRP ART ART 6 0.0 Also there is some evidence that ART itself may contribute to overall neuroinflammation 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 29822 18040778 35427 9006 4799 HADH HAD HAD 10 0.0 For these reasons ideal therapeutic agents for the treatment of HAD would attenuate HIV-1 neuropathogenesis through both direct inhibition of viral 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 29823 18040778 35430 10676 6121 IRF6 LPS LPS-induced 16 0.3 the benzodiazepines which cross the CNS bind to microglia inhibit LPS-induced TNF-A production suppress HIV-1 Tat protein-induced chemotaxis and also inhibit 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 29825 18040778 35431 9006 4799 HADH HAD HAD 10 0.0 These agents may yet prove to be useful in controlling HAD by targeting microglia as the central player in this process 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 29826 18040778 35433 5693 2770 DES DES Des 32 0.0 subarachnoid space from an adjacent parenchymal tubercle (Leonard Leonard and Des Prez 1990 2 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 29841 18040778 35462 9947 5468 IGFALS ALS ALS 54 0.3 (Cagnin Cagnin et al. 2001 and amyotrophic lateral sclerosis (ALS) ALS (Turner Turner et al. 2004 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00072716234739917<>ScoreDetail__5468|IGFALS|0.000246042811449192__11179|SOD1|0.00072716234739917__ 0 0 0 0 0 29842 18040778 35466 9947 5468 IGFALS ALS ALS 37 0.3 neurodegenerative processes in MS AD Parkinson's disease (PD), PD and ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00072716234739917<>ScoreDetail__5468|IGFALS|0.000246042811449192__11179|SOD1|0.00072716234739917__ 0 0 0 0 0 29844 18040778 35471 10676 6121 IRF6 LPS LPS 1 0.3 Lipopolysaccharide (LPS), LPS tumor necrosis factor (TNF)-A, TNF -A reactive oxygen intermediates (ROI), 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 29846 18040778 35471 9947 5468 IGFALS ALS ALS 29 0.3 (AD), AD Parkinson's disease (PD), PD amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00072716234739917<>ScoreDetail__5468|IGFALS|0.000246042811449192__11179|SOD1|0.00072716234739917__ 0 0 0 0 0 29850 18040778 35499 9947 5468 IGFALS ALS ALS 13 0.3 E 2 are elevated in the CNS of patients with ALS and recent studies have implicated activated microglia in this _amp_#8220 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00072716234739917<>ScoreDetail__5468|IGFALS|0.000246042811449192__11179|SOD1|0.00072716234739917__ 0 0 0 0 0 29852 18040778 35501 9947 5468 IGFALS ALS ALS 61 0.3 in development of new treatments of AD PD MS and ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00072716234739917<>ScoreDetail__5468|IGFALS|0.000246042811449192__11179|SOD1|0.00072716234739917__ 0 0 0 0 0 29859 18040778 35510 10676 6121 IRF6 LPS LPS 30 0.3 as well as to suppress the production of TNF-A by LPS and AB peptide-stimulated microglia (Dheen Dheen et al. 2005 moreover 1 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 29860 18040778 35514 9947 5468 IGFALS ALS ALS 3 0.3 Of relevance to ALS a drug screening program recently revealed that ceftriaxone modulates glutamate 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00072716234739917<>ScoreDetail__5468|IGFALS|0.000246042811449192__11179|SOD1|0.00072716234739917__ 0 0 0 0 0 29861 18040778 35514 9947 5468 IGFALS ALS ALS 27 0.3 neurons both in vitro and in an animal model of ALS (Rothstein Rothstein et al. 2005 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00072716234739917<>ScoreDetail__5468|IGFALS|0.000246042811449192__11179|SOD1|0.00072716234739917__ 0 0 0 0 0 24978 18246426 29675 20996 11179 SOD1 ALS ALS 12 0.0 of cytokines in the pathophysiology of amyotrophic lateral sclerosis (ALS) ALS and its relation to clinical outcome has not been clearly 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 24981 18246426 29676 20996 11179 SOD1 ALS ALS 18 0.0 nitric oxide (NO) NO levels in the serum of 22 ALS patients and 20 controls 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 24984 18246426 29677 20996 11179 SOD1 ALS ALS 14 0.0 IFN-G levels were significantly ( P _lt_ 0.001 elevated in ALS patients 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 24985 18246426 29679 20996 11179 SOD1 ALS ALS 9 0.0 We further noticed positive correlation between the duration of ALS and these proinflammatory molecule levels 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 24986 18246426 29680 20996 11179 SOD1 ALS ALS 16 0.0 to play a crucial role in the neurodegeneration observed in ALS 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 24988 18246426 29681 20996 11179 SOD1 ALS ALS 30 0.0 may be one of the factors underlying the progression of ALS 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 24989 18246426 29682 20996 11179 SOD1 ALS ALS 8 0.0 This study confirms the involvement of inflammation in ALS and the need to develop surrogate markers to check the 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 24990 18246426 29684 20996 11179 SOD1 ALS ALS 4 0.0 Introduction Amyotrophic lateral sclerosis (ALS), ALS which is progressive and usually runs a fatal course within 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 24991 18246426 29685 20996 11179 SOD1 ALS ALS 4 0.0 The underlying cause of ALS is not well known but familial environmental viral metabolic and 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 24992 18246426 29689 20996 11179 SOD1 ALS ALS 16 0.0 levels were significantly higher in a group of northern indian ALS patients 9 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 25013 18246426 29703 20996 11179 SOD1 ALS ALS 18 0.0 the systemic inflammatory markers TNF-A IFN-G and nitric oxide in ALS patients and evaluate their role in the prognosis of this 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 25014 18246426 29705 20996 11179 SOD1 ALS ALS 0 0.0 ALS patients and control subjects This is a tertiary referral-hospital based 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 25015 18246426 29706 20996 11179 SOD1 ALS ALS 0 0.0 ALS patients were recruited from outpatients using El Escorial diagnostic criteria 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 25016 18246426 29708 20996 11179 SOD1 ALS ALS 3 0.0 Patients diagnosed with ALS also met an extensive list of exclusionary criteria including sensory 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 25017 18246426 29708 20996 11179 SOD1 ALS ALS 28 0.0 bladder changes and metabolic or toxic disorder that could mimic ALS e.g. myelopathy lead intoxication endocrine abnormalities or peripheral neuropathy 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 25018 18246426 29709 20996 11179 SOD1 ALS ALS 7 0.0 Twenty-two patients were diagnosed as having sporadic ALS 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 25019 18246426 29715 12527 9234 MED1 PBP PBP 11 0.6 these patients were diagnosed as having progressive bulbar palsy (PBP), PBP which results from exclusive lower motor neuron involvement in bulbar 1 JUMiner_v2.2 1 2 UserEdit 0 2 9240 TotalCon:5<>8630|PEBP1|5037|Complete__2989|DOCK3|1795|Complete__9234|MED1|5469|Complete__9008|PKD1|5310|Complete__9240|PPBP|5473|Complete__<>AvaiableGeneRif=5<>BEST:9240|PPBP|0.000751566220115642<>ScoreDetail__9234|MED1|0.000574762661096727__9008|PKD1|0.000448804005918725__8630|PEBP1|0.000596132816928709__2989|DOCK3|0.000427899015832264__9240|PPBP|0.000751566220115642__ 1 1 0 0 0 25020 18246426 29716 12527 9234 MED1 PBP PBP 1 0.6 These PBP patients were having tongue fasciculations and swallowing difficulty but their 1 JUMiner_v2.2 1 2 UserEdit 0 2 9240 TotalCon:5<>8630|PEBP1|5037|Complete__2989|DOCK3|1795|Complete__9234|MED1|5469|Complete__9008|PKD1|5310|Complete__9240|PPBP|5473|Complete__<>AvaiableGeneRif=5<>BEST:9240|PPBP|0.000751566220115642<>ScoreDetail__9234|MED1|0.000574762661096727__9008|PKD1|0.000448804005918725__8630|PEBP1|0.000596132816928709__2989|DOCK3|0.000427899015832264__9240|PPBP|0.000751566220115642__ 1 1 0 0 0 25021 18246426 29721 20996 11179 SOD1 ALS ALS 9 0.0 We were interested in testing the immunologic pathogenesis for ALS as has been recently proposed hence we only included 20 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 25026 18246426 29729 11629 6493 LAMC2 CSF CSF 4 0.0 We have not obtained CSF from patients and controls due to ethical considerations 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 25029 18246426 29742 20996 11179 SOD1 ALS ALS 24 0.0 values of these cytokines in control subjects and patients with ALS 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 25031 18246426 29746 20996 11179 SOD1 ALS ALS 9 0.0 It may be noted that serum TNF-A levels in ALS patients were significantly higher ( P _lt_ 0.001 with respect 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 25033 18246426 29747 20996 11179 SOD1 ALS ALS 17 0.0 ( P _lt_ 0.001 in serum IFN-G NO levels in ALS patients versus controls (Figs Figs 2 3 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 25035 18246426 29748 20996 11179 SOD1 ALS ALS 9 0.0 1 Serum mean TNF-A (pg/ml pg ml SEM levels in ALS patients ( n = 22 and controls ( n = 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 25037 18246426 29749 20996 11179 SOD1 ALS ALS 9 0.0 2 Serum mean IFN-G (pg/ml pg ml SEM levels in ALS patients ( n = 22 and controls ( n = 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 25038 18246426 29750 20996 11179 SOD1 ALS ALS 11 0.0 NO (_amp_#956;Mol/ml _amp_#956 Mol ml of blood SEM levels in ALS patients ( n = 22 and controls ( n = 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 25041 18246426 29751 20996 11179 SOD1 ALS ALS 7 0.0 Furthermore it can be seen that in ALS patients serum TNF-A IFN-G and NO levels (Figs Figs 4 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 25043 18246426 29753 20996 11179 SOD1 ALS ALS 22 0.0 SEM levels versus duration of illness in the patients of ALS ( n = 12 at 6 months 5 at 12 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 25045 18246426 29755 20996 11179 SOD1 ALS ALS 20 0.0 ml SEM versus duration of illness in the patients of ALS ( n = 12 at 6 months 5 at 12 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 25046 18246426 29757 20996 11179 SOD1 ALS ALS 22 0.0 blood SEM versus duration of illness in the patients of ALS ( n = 12 at 6 months 5 at 12 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 25047 18246426 29760 20996 11179 SOD1 ALS ALS 0 0.0 ALS occurs more commonly in men than in women and women 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 25048 18246426 29761 20996 11179 SOD1 ALS ALS 20 0.0 to whether estrogen may be neuroprotective in delaying or preventing ALS 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 25052 18246426 29763 20996 11179 SOD1 ALS ALS 15 0.0 observed significant elevation in serum TNF-A and IFN-G levels in ALS patients and also this increase was most prominent at 24 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 25055 18246426 29765 20996 11179 SOD1 ALS ALS 13 0.0 et al 29 measured IL-6 and TNF-A in patients with ALS 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 25056 18246426 29766 20996 11179 SOD1 ALS ALS 13 0.0 elevated levels to a normal response to hypoxemia rather than ALS 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 25058 18246426 29768 20996 11179 SOD1 ALS ALS 17 0.0 five patients died around 25 months from the onset of ALS 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 25062 18246426 29770 20996 11179 SOD1 ALS ALS 25 0.0 between blood TNF-A levels and duration of the disease in ALS patients 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 25065 18246426 29771 11629 6493 LAMC2 CSF CSF 16 0.0 31 could not detect TNF-A and IFN-G levels in the CSF of ALS patients using a cytometric bead assay 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 25066 18246426 29771 20996 11179 SOD1 ALS ALS 18 0.0 not detect TNF-A and IFN-G levels in the CSF of ALS patients using a cytometric bead assay 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 25067 18246426 29772 20996 11179 SOD1 ALS ALS 15 0.0 could be due to several factors including geographical pattern of ALS methodology antigenic versus biological response etc 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 25069 18246426 29774 20996 11179 SOD1 ALS ALS 21 0.0 of NOS in brain 34 the pronounced increases found in ALS patients may also suggest a role for NO in the 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 25070 18246426 29776 20996 11179 SOD1 ALS ALS 28 0.0 the patients due to significant morbidity and mortality associated with ALS 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 25073 18246426 29777 20996 11179 SOD1 ALS ALS 16 0.0 levels peaked around 24 months from the onset in these ALS patients and it may be that systemic inflammation noticed could 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 25074 18246426 29778 20996 11179 SOD1 ALS ALS 11 0.0 the exact role of this observation in the pathogenesis of ALS and its correlation to neuroinflammation and neurodegeneration needs a rigorous 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.00103658273225932<>ScoreDetail__5468|IGFALS|0.00103658273225932__11179|SOD1|0.000659654298654437__ 0 0 0 0 0 15943 18312546 18853 20996 11179 SOD1 ALS ALS 15 1.4 programmed cell death and inflammation in amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00122970320456855<>ScoreDetail__5468|IGFALS|0.000393226670598933__11179|SOD1|0.00122970320456855__ 0 0 0 0 0 15945 18312546 18854 20996 11179 SOD1 ALS ALS 15 1.4 the anti-inflammatory peroxisome proliferator-activated receptor-gamma (PPARgamma) PPARgamma agonist pioglitazone in ALS we verified changes in the population of neurons astrocytes and 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00122970320456855<>ScoreDetail__5468|IGFALS|0.000393226670598933__11179|SOD1|0.00122970320456855__ 0 0 0 0 0 15947 18312546 18854 20996 11179 SOD1 ALS ALS 54 1.4 transgene for G93A mutant human superoxide dismutase-1 (SOD1) SOD1 (ALS ALS mice and non-transgenic littermates (control control mice performed immunohistochemical and 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00122970320456855<>ScoreDetail__5468|IGFALS|0.000393226670598933__11179|SOD1|0.00122970320456855__ 0 0 0 0 0 15951 18312546 18855 20996 11179 SOD1 ALS ALS 20 1.4 significantly lower in the non-treated groups of presymptomatic and advanced ALS mice than in the non-treated groups of age-matched control mice 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00122970320456855<>ScoreDetail__5468|IGFALS|0.000393226670598933__11179|SOD1|0.00122970320456855__ 0 0 0 0 0 15954 18312546 18855 20996 11179 SOD1 ALS ALS 56 1.4 microglia were significantly higher in the non-treated group of advanced ALS mice than in the non-treated group of control mice and 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00122970320456855<>ScoreDetail__5468|IGFALS|0.000393226670598933__11179|SOD1|0.00122970320456855__ 0 0 0 0 0 19002 18370853 22358 20996 11179 SOD1 ALS ALS 3 2.4 Amyotrophic lateral sclerosis (ALS) ALS is a late-onset progressive degeneration of motor neurons occurring both 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00227846138246539<>ScoreDetail__5468|IGFALS|0.000577151587166865__11179|SOD1|0.00227846138246539__ 0 0 0 0 0 19003 18370853 22359 20996 11179 SOD1 ALS ALS 3 2.4 The etiology of ALS remains unknown but one fifth of instances are due to 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00227846138246539<>ScoreDetail__5468|IGFALS|0.000577151587166865__11179|SOD1|0.00227846138246539__ 0 0 0 0 0 19005 18370853 22360 20996 11179 SOD1 ALS ALS 4 2.4 Because sporadic and familial ALS affect the same neurons with similar pathology it is hoped 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00227846138246539<>ScoreDetail__5468|IGFALS|0.000577151587166865__11179|SOD1|0.00227846138246539__ 0 0 0 0 0 19007 18370853 22361 20996 11179 SOD1 ALS ALS 22 2.4 mutant SOD1 which represent the best available models for familial ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00227846138246539<>ScoreDetail__5468|IGFALS|0.000577151587166865__11179|SOD1|0.00227846138246539__ 0 0 0 0 0 20052 18397603 23527 20996 11179 SOD1 ALS ALS 15 0.5 ubiquitin caspase and CDK5 expression in skeletal muscle of an ALS mouse model 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00116148231049488<>ScoreDetail__5468|IGFALS|0.0005161100051611__11179|SOD1|0.00116148231049488__ 0 0 0 0 0 20053 18397603 23528 20996 11179 SOD1 ALS ALS 19 0.5 altered in several neuromuscular diseases including amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00116148231049488<>ScoreDetail__5468|IGFALS|0.0005161100051611__11179|SOD1|0.00116148231049488__ 0 0 0 0 0 20055 18397603 23530 9939 5464 IGF1 IGF1 Igf-1 9 0.0 We previously reported that muscle-restricted expression of a localized Igf-1 isoform maintained muscle integrity stabilized neuromuscular junctions reduced inflammation in 11 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 20066 18397603 23537 20996 11179 SOD1 ALS ALS 22 0.5 the attenuation of muscle wasting in the mouse model of ALS disease 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00116148231049488<>ScoreDetail__5468|IGFALS|0.0005161100051611__11179|SOD1|0.00116148231049488__ 0 0 0 0 0 10356 18425621 11987 20996 11179 SOD1 ALS ALS 8 0.0 Objective Neuroinflammation contributes to motor neuron degeneration in ALS 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000723351088314592<>ScoreDetail__5468|IGFALS|0.000723351088314592__11179|SOD1|0.000577648692549949__ 0 0 0 0 0 10357 18425621 11988 21921 11791 TCHH THL THL 1 0.0 Thalidomide (THL) THL shows potent anti-inflammatory properties and increased the lifespan in ALS 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 10358 18425621 11988 20996 11179 SOD1 ALS ALS 11 0.0 THL shows potent anti-inflammatory properties and increased the lifespan in ALS transgenic mice 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000723351088314592<>ScoreDetail__5468|IGFALS|0.000723351088314592__11179|SOD1|0.000577648692549949__ 0 0 0 0 0 10359 18425621 11989 21921 11791 TCHH THL THL 19 0.0 treatment of ALS.We conducted a pilot randomized clinical trial of THL in patients with ALS to assess safety feasibility and preliminary 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 10360 18425621 11989 20996 11179 SOD1 ALS ALS 23 0.0 a pilot randomized clinical trial of THL in patients with ALS to assess safety feasibility and preliminary estimates of treatment efficacy 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000723351088314592<>ScoreDetail__5468|IGFALS|0.000723351088314592__11179|SOD1|0.000577648692549949__ 0 0 0 0 0 10361 18425621 11990 21921 11791 TCHH THL THL 5 0.0 Methods Patients were randomized to THL in combination with riluzole (n n = 18 or riluzole 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 10362 18425621 11991 21921 11791 TCHH THL THL 0 0.0 THL was initiated at 100 mg per day for 6 weeks 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 10363 18425621 11993 21921 11791 TCHH THL THL 5 0.0 Results Within 12 weeks of THL treatment nine THL patients (50%) 50% developed bradycardia defined as 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 10364 18425621 11993 21921 11791 TCHH THL THL 8 0.0 Results Within 12 weeks of THL treatment nine THL patients (50%) 50% developed bradycardia defined as a heart rate 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 10365 18425621 11994 21921 11791 TCHH THL THL 8 0.0 Mean heart rate dropped by 17 bpm with THL treatment 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 10366 18425621 11999 21921 11791 TCHH THL THL 9 0.0 Conclusion Bradycardia was the most common adverse event of THL treatment in ALS 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 10367 18425621 11999 20996 11179 SOD1 ALS ALS 12 0.0 was the most common adverse event of THL treatment in ALS 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000723351088314592<>ScoreDetail__5468|IGFALS|0.000723351088314592__11179|SOD1|0.000577648692549949__ 0 0 0 0 0 10368 18425621 12000 21921 11791 TCHH THL THL-related 0 0.0 THL-related bradycardia does not appear to be ALS-specific 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 10369 18425621 12000 20996 11179 SOD1 ALS ALS-specific 7 0.0 THL-related bradycardia does not appear to be ALS-specific 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000723351088314592<>ScoreDetail__5468|IGFALS|0.000723351088314592__11179|SOD1|0.000577648692549949__ 0 0 0 0 0 10370 18425621 12001 21921 11791 TCHH THL THL-induced 11 0.0 is conceivable however that the unexpected frequency and severity of THL-induced bradycardia may be related to subclinical involvement of the autonomic 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 10371 18425621 12001 20996 11179 SOD1 ALS ALS 25 0.0 related to subclinical involvement of the autonomic nervous system in ALS 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000723351088314592<>ScoreDetail__5468|IGFALS|0.000723351088314592__11179|SOD1|0.000577648692549949__ 0 0 0 0 0 10372 18425621 12002 21921 11791 TCHH THL THL 11 0.0 cardiac toxicity discourages further clinical trials and compassionate use of THL in ALS 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 10373 18425621 12002 20996 11179 SOD1 ALS ALS 13 0.0 discourages further clinical trials and compassionate use of THL in ALS 1 JUMiner_v2.2 1 0 0 2 5468 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:5468|IGFALS|0.000723351088314592<>ScoreDetail__5468|IGFALS|0.000723351088314592__11179|SOD1|0.000577648692549949__ 0 0 0 0 0 10983 18436268 12688 20996 11179 SOD1 ALS ALS 3 2.4 Amyotrophic lateral sclerosis (ALS) ALS is a neurodegenerative disease caused by selective degeneration of motor 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00180359344307603<>ScoreDetail__5468|IGFALS|0.000929775250879012__11179|SOD1|0.00180359344307603__ 0 0 0 0 0 10985 18436268 12689 20996 11179 SOD1 ALS ALS 12 2.4 superoxide dismutase (SOD1) SOD1 account for 20% cases of familial ALS (fALS), fALS but the underlying pathogenetic mechanisms are largely unknown 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00180359344307603<>ScoreDetail__5468|IGFALS|0.000929775250879012__11179|SOD1|0.00180359344307603__ 0 0 0 0 0 10987 18436268 12690 20996 11179 SOD1 ALS ALS 6 2.4 Using SOD1 G93A mice model of ALS we demonstrated that mutation in SOD1 caused a significant increase 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00180359344307603<>ScoreDetail__5468|IGFALS|0.000929775250879012__11179|SOD1|0.00180359344307603__ 0 0 0 0 0 10994 18436268 12694 24185 29175 WDTC1 ADP ADP-ribose 14 0.2 treatment decreased the levels of cleaved caspase-3 and poly(ADP-ribose)polymerase poly ADP-ribose polymerase (PARP) PARP but up-regulated the level of anti-apoptotic protein 5 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 10995 18436268 12699 20996 11179 SOD1 ALS ALS 3 2.4 Amyotrophic lateral sclerosis (ALS) ALS is the most frequently diagnosed form of adult-onset motor neuron 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00180359344307603<>ScoreDetail__5468|IGFALS|0.000929775250879012__11179|SOD1|0.00180359344307603__ 0 0 0 0 0 10996 18436268 12700 20996 11179 SOD1 ALS ALS 0 2.4 ALS is characterized by the selective degeneration of lower and upper 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00180359344307603<>ScoreDetail__5468|IGFALS|0.000929775250879012__11179|SOD1|0.00180359344307603__ 0 0 0 0 0 10997 18436268 12701 20996 11179 SOD1 ALS ALS 4 2.4 Around 10% cases of ALS patients are autosomal dominant referred as fALS and 20% patients 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00180359344307603<>ScoreDetail__5468|IGFALS|0.000929775250879012__11179|SOD1|0.00180359344307603__ 0 0 0 0 0 11000 18436268 12702 20996 11179 SOD1 ALS ALS 21 2.4 neuron disease resembling the most clinical features of the human ALS which make them suitable for studying the pathogenesis of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00180359344307603<>ScoreDetail__5468|IGFALS|0.000929775250879012__11179|SOD1|0.00180359344307603__ 0 0 0 0 0 11001 18436268 12702 20996 11179 SOD1 ALS ALS 31 2.4 ALS which make them suitable for studying the pathogenesis of ALS ( Gurney et_amp_#xa0 al. 1994 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00180359344307603<>ScoreDetail__5468|IGFALS|0.000929775250879012__11179|SOD1|0.00180359344307603__ 0 0 0 0 0 11003 18436268 12703 20996 11179 SOD1 ALS ALS 20 2.4 the association of homocysteine (Hcy) Hcy and the development of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00180359344307603<>ScoreDetail__5468|IGFALS|0.000929775250879012__11179|SOD1|0.00180359344307603__ 0 0 0 0 0 11006 18436268 12707 20996 11179 SOD1 ALS ALS 46 2.4 Hcy may play an important role in the pathogenesis of ALS ( Chung et_amp_#xa0 al. 2003 and Sung et_amp_#xa0 al. 2002 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00180359344307603<>ScoreDetail__5468|IGFALS|0.000929775250879012__11179|SOD1|0.00180359344307603__ 0 0 0 0 0 11008 18436268 12708 18723 10261 ROS1 ROS ROS 20 0.0 factors such as TNF-_amp_#x3b1 and promoted reactive oxygen species (ROS) ROS as well as activated NMDA subtype of the glutamate receptors 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 11009 18436268 12709 20996 11179 SOD1 ALS ALS 15 2.4 hypothesize that Hcy may be involved in the pathogenesis of ALS and lowering Hcy may be beneficial to this disease 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00180359344307603<>ScoreDetail__5468|IGFALS|0.000929775250879012__11179|SOD1|0.00180359344307603__ 0 0 0 0 0 11011 18436268 12716 20996 11179 SOD1 ALS ALS 24 2.4 and B12 treatment has clinical value for the treatment of ALS patients in the future 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00180359344307603<>ScoreDetail__5468|IGFALS|0.000929775250879012__11179|SOD1|0.00180359344307603__ 0 0 0 0 0 11013 18436268 12722 22055 11764 TG TGN TgN 4 0.2 The colony of well-characterized TgN (SOD1 SOD1 G93A Gur transgenic males which resemble most clinical 5 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 11019 18436268 12759 19728 9075 SERPINF2 API API 9 0.0 MS/MS MS MS system was a triple quadrupole mass spectrometer API 3000 instrument (ABI-SCIEX, ABI-SCIEX Toronto Canada equipped with Turbo Ionspray 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 11028 18436268 12788 19573 10691 SDS SDS SDS 10 0.0 40 _amp_#x3bc g of each sample was separated in 8% SDS gel transferred onto 0.45 _amp_#x3bc m PVDF membrane incubated with 1 JUMiner_v2.2 1 0 0 2 10691 TotalCon:2<>10691|SDS|10993|Complete__19440|SBDS|51119|Complete__<>AvaiableGeneRif=2<>BEST:10691|SDS|0.000488963397597094<>ScoreDetail__10691|SDS|0.000488963397597094__19440|SBDS|0.000312857868080233__ 0 0 0 0 0 11029 18436268 12789 3778 10620 CCL21 ECL ECL 35 0.0 Pierce IL USA and then protein bands were visualized using ECL (Pierce, Pierce IL USA 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 11034 18436268 12802 20996 11179 SOD1 ALS ALS 9 2.4 SOD1 G93A mice usually recapitulated the clinical progression of ALS by displaying overt hind-limb disability at the age about 100 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00180359344307603<>ScoreDetail__5468|IGFALS|0.000929775250879012__11179|SOD1|0.00180359344307603__ 0 0 0 0 0 11046 18436268 12822 20996 11179 SOD1 ALS ALS 9 2.4 Inflammation plays an important role in the pathogenesis of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00180359344307603<>ScoreDetail__5468|IGFALS|0.000929775250879012__11179|SOD1|0.00180359344307603__ 0 0 0 0 0 11072 18436268 12842 20996 11179 SOD1 ALS ALS 29 2.4 prolong the lifespan by protecting motor neurons against apoptosis in ALS transgenic mice 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00180359344307603<>ScoreDetail__5468|IGFALS|0.000929775250879012__11179|SOD1|0.00180359344307603__ 0 0 0 0 0 11073 18436268 12843 20996 11179 SOD1 ALS ALS 11 2.4 The neuroprotective effects of FA or FA B12 treatment in ALS transgenic model may be related to their biological role in 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00180359344307603<>ScoreDetail__5468|IGFALS|0.000929775250879012__11179|SOD1|0.00180359344307603__ 0 0 0 0 0 11079 18436268 12846 20996 11179 SOD1 ALS ALS 13 2.4 have showed that there might be association between Hcy and ALS the role of Hcy in ALS development is not well 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00180359344307603<>ScoreDetail__5468|IGFALS|0.000929775250879012__11179|SOD1|0.00180359344307603__ 0 0 0 0 0 11080 18436268 12846 20996 11179 SOD1 ALS ALS 19 2.4 association between Hcy and ALS the role of Hcy in ALS development is not well defined 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00180359344307603<>ScoreDetail__5468|IGFALS|0.000929775250879012__11179|SOD1|0.00180359344307603__ 0 0 0 0 0 11081 18436268 12847 20996 11179 SOD1 ALS ALS 21 2.4 level of cytokine which may contribute to the progression of ALS ( Holven et_amp_#xa0 al. 2006 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00180359344307603<>ScoreDetail__5468|IGFALS|0.000929775250879012__11179|SOD1|0.00180359344307603__ 0 0 0 0 0 11090 18436268 12852 20996 11179 SOD1 ALS ALS 42 2.4 which suggest that iNOS may contribute to the pathology of ALS and represent a valuable therapeutic target for the disease ( 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00180359344307603<>ScoreDetail__5468|IGFALS|0.000929775250879012__11179|SOD1|0.00180359344307603__ 0 0 0 0 0 11095 18436268 12855 20996 11179 SOD1 ALS ALS 12 2.4 supports that the eventual process of motor neuron death in ALS may result from the activation of apoptotic pathways especially the 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00180359344307603<>ScoreDetail__5468|IGFALS|0.000929775250879012__11179|SOD1|0.00180359344307603__ 0 0 0 0 0 11099 18436268 12857 20996 11179 SOD1 ALS ALS 6 2.4 Bcl-2 plays a prominent role in ALS pathogenesis which is involved in the oxidative stress and in 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00180359344307603<>ScoreDetail__5468|IGFALS|0.000929775250879012__11179|SOD1|0.00180359344307603__ 0 0 0 0 0 11113 18436268 12865 20996 11179 SOD1 ALS ALS 28 2.4 FA or FA B12 could provide anti-apoptotic effect in the ALS transgenic mice 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00180359344307603<>ScoreDetail__5468|IGFALS|0.000929775250879012__11179|SOD1|0.00180359344307603__ 0 0 0 0 0 11116 18436268 12868 20996 11179 SOD1 ALS ALS 29 2.4 lifespan accompanied by the attenuation of motor neuron loss in ALS transgenic mice 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00180359344307603<>ScoreDetail__5468|IGFALS|0.000929775250879012__11179|SOD1|0.00180359344307603__ 0 0 0 0 0 11121 18436268 12871 20996 11179 SOD1 ALS ALS 17 2.4 potential of FA or FA B12 for the treatment of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00180359344307603<>ScoreDetail__5468|IGFALS|0.000929775250879012__11179|SOD1|0.00180359344307603__ 0 0 0 0 0 11940 18464922 14213 20996 11179 SOD1 ALS ALS 4 1.1 Abstract Amyotrophic lateral sclerosis (ALS) ALS is a debilitating and one of the most common adult-onset 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 11941 18464922 14215 20996 11179 SOD1 ALS ALS 0 1.1 ALS has an obscure cause and currently no effective treatment exists 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 11943 18464922 14216 20996 11179 SOD1 ALS ALS 35 1.1 ability to block the neuropathological damage caused by inflammation in ALS and possibly in other neudegenerative diseases like Huntington's disease (HD) 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 11945 18464922 14218 20996 11179 SOD1 ALS ALS 10 1.1 Therefore PPAR-_amp_#x003b3 agonists are thought to be neuroprotective in ALS and HD 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 11948 18464922 14219 20996 11179 SOD1 ALS ALS 22 1.1 a PPAR-_amp_#x003b3 agonist in G93A SOD1 transgenic mouse model of ALS and found significant increase in survival of G93A SOD1 mice 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 11951 18464922 14220 20996 11179 SOD1 ALS ALS 25 1.1 a new target for the development of therapeutic strategies for ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 11957 18464922 14223 20996 11179 SOD1 ALS ALS 8 1.1 Therefore PPAR-_amp_#x003b3 is a possible target for ALS and HD as it functions as transcription factor that interacts 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 11960 18464922 14224 20996 11179 SOD1 ALS ALS 9 1.1 In this review the role of PPAR-_amp_#x003b3 in ALS and HD is discussed based on the current literature and 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 11985 18464922 14246 20996 11179 SOD1 ALS ALS 16 1.1 be neurotoxic in models of neurodegenerative diseases for example in ALS 28 _amp_#x02013 30 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 11993 18464922 14255 20996 11179 SOD1 ALS ALS 17 1.1 b schematic diagrams linking mechanisms of neuronal cell death in ALS and a representation of PPAR-_amp_#x003b3 activation 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 11995 18464922 14256 20996 11179 SOD1 ALS ALS 9 1.1 The mechanisms and pathways implicated in the pathogenesis of ALS that lead to the demise of motor (more more ... 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 11997 18464922 14259 20996 11179 SOD1 ALS ALS 3 1.1 Amyotrophic lateral sclerosis (ALS) ALS is a devastating fatal neurodegenerative disorder characterized by a loss 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 11998 18464922 14260 20996 11179 SOD1 ALS ALS 10 1.1 Oxidative stress mitochondrial dysfunction and neuroinflammation have been implicated in ALS pathogenesis ( Figure 1(b) 1 b 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12001 18464922 14261 20996 11179 SOD1 ALS ALS 16 1.1 may be a major signaling pathway involved in neuroinflammation in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12003 18464922 14262 20996 11179 SOD1 ALS ALS 21 1.1 and promising approach to understand the mechanism of neuroinflammation in ALS ( Figure 1(b) 1 b 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12004 18464922 14263 20996 11179 SOD1 ALS ALS 10 1.1 Since neuroinflammatory pathway has become one of the hallmarks of ALS 29 33 34 therefore blockage of neuroinflammation is of great 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12005 18464922 14263 20996 11179 SOD1 ALS ALS 32 1.1 is of great interest because of the potential efficacy in ALS patients 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12012 18464922 14265 20996 11179 SOD1 ALS ALS 31 1.1 and are indispensable to study the role of PPAR-_amp_#x003b3 in ALS which may potentially lead to beneficial effects in ALS patients 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12013 18464922 14265 20996 11179 SOD1 ALS ALS 40 1.1 in ALS which may potentially lead to beneficial effects in ALS patients 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12016 18464922 14269 20996 11179 SOD1 ALS ALS 4 1.1 PIOGLITAZONE IS NEUROPROTECTIVE IN ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12018 18464922 14270 20996 11179 SOD1 ALS ALS 15 1.1 effect of pioglitazone in transgenic G93A SOD1 mouse model of ALS and showed that pioglitazone treatment improved motor performance delayed weight 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12019 18464922 14270 20996 11179 SOD1 ALS ALS 40 1.1 loss and significantly increased survival by delaying the onset of ALS 38 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12024 18464922 14273 20996 11179 SOD1 ALS ALS 21 1.1 of pioglitazone treatment in G93A SOD1 transgenic mouse model of ALS 39 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12026 18464922 14274 20996 11179 SOD1 ALS ALS 15 1.1 agonist treatment improved survival muscle strength and weight loss in ALS mice 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12042 18464922 14287 20996 11179 SOD1 ALS ALS 16 1.1 neuroprotective role of PPAR-_amp_#x003b3 agonist in transgenic mouse model of ALS and other experimental animal models could potentially be a foundation 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12044 18464922 14287 20996 11179 SOD1 ALS ALS 52 1.1 their role in protecting motor neurons from inflammatory damages in ALS ( Figure 1(b) 1 b 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12048 18464922 14288 20996 11179 SOD1 ALS ALS 40 1.1 will provide crucial insights on the role of PPAR-_amp_#x003b3 in ALS and other neurodegenerative diseases 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12049 18464922 14290 20996 11179 SOD1 ALS ALS 3 1.1 MITOCHONDRIAL DYSFUNCTION IN ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12050 18464922 14291 20996 11179 SOD1 ALS ALS 3 1.1 Mitochondrial compromise in ALS is substantiated by reports of changes in their structure number 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12051 18464922 14291 20996 11179 SOD1 ALS ALS 26 1.1 in motor neurons and skeletal muscle in familial and sporadic ALS patients 42 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12052 18464922 14292 20996 11179 SOD1 ALS ALS 12 1.1 reported the potential involvement of mitochondria in the pathogenesis of ALS as mitochondrial abnormalities were found in proximal axons anterior horn 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12053 18464922 14292 20996 11179 SOD1 ALS ALS 24 1.1 mitochondrial abnormalities were found in proximal axons anterior horn of ALS spinal cords 43 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12054 18464922 14293 20996 11179 SOD1 ALS ALS 16 1.1 have been detected in postmortem muscle and spinal cord of ALS patients 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12057 18464922 14295 20996 11179 SOD1 ALS ALS 16 1.1 mice overexpressing human G93A SOD1 that display most of the ALS symptoms and pathologies have mitochondrial dysfunction 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12058 18464922 14298 20996 11179 SOD1 ALS ALS 11 1.1 observations suggest that mitochondrial abnormalities may trigger the onset of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12070 18464922 14305 20996 11179 SOD1 ALS ALS 27 1.1 predict that PGC-1 _amp_#x003b1 could play an important role in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12072 18464922 14306 20996 11179 SOD1 ALS ALS 10 1.1 Impairment of PGC-1 _amp_#x003b1 could contribute to mitochondrial dysfunction in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12074 18464922 14307 20996 11179 SOD1 ALS ALS 22 1.1 _amp_#x003b1 or its expression in the transgenic mouse model of ALS or human ALS postmortem tissues 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12075 18464922 14307 20996 11179 SOD1 ALS ALS 25 1.1 expression in the transgenic mouse model of ALS or human ALS postmortem tissues 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12076 18464922 14308 20996 11179 SOD1 ALS ALS 13 1.1 reports on the altered or impaired expression of genes in ALS that some of them fit in the PGC-1 _amp_#x003b1 target 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12079 18464922 14308 20996 11179 SOD1 ALS ALS 45 1.1 be a prominent role for PGC-1 _amp_#x003b1 translational machinery in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12088 18464922 14310 20996 11179 SOD1 ALS ALS 32 1.1 impair PGC-1 _amp_#x003b1 and expression of its target genes in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12093 18464922 14312 20996 11179 SOD1 ALS ALS 9 1.1 Future studies on PGC-1 _amp_#x003b1 and PPAR-_amp_#x003b3 in ALS patients and transgenic mice will shed some lights on these 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12108 18464922 14323 1489 932 BAAT BAT BAT 24 0.0 found to be disrupted in the brown adipose tissue (BAT) BAT of HD transgenic mice 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 12109 18464922 14326 1489 932 BAAT BAT BAT 2 0.0 In rodents BAT is the tissue that responds to cold 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 12156 18464922 14373 20996 11179 SOD1 ALS ALS 6 1.1 The role of PPAR-_amp_#x003b3 in ALS AD and Parkinson's disease are backed with evidence 19 20 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12171 18464922 14383 20996 11179 SOD1 ALS ALS 20 1.1 in neurodegenerative diseases in particular in a mouse model of ALS and HD 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12172 18464922 14384 20996 11179 SOD1 ALS ALS 9 1.1 The utilization of pioglitazone in a mouse model of ALS by two independent studies provides strong indication for the involvement 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12174 18464922 14384 20996 11179 SOD1 ALS ALS 24 1.1 studies provides strong indication for the involvement of PPAR-_amp_#x003b3 in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12178 18464922 14386 20996 11179 SOD1 ALS ALS 20 1.1 which PPAR-_amp_#x003b3 agonists produce neuroprotection in a mouse model of ALS and test whether PPAR-_amp_#x003b3 has a role in HD 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12182 18464922 14388 20996 11179 SOD1 ALS ALS 18 1.1 to determine the effect of PPAR-_amp_#x003b3 agonist on muscles in ALS and HD mouse models 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12184 18464922 14389 20996 11179 SOD1 ALS ALS 20 1.1 studies are necessary in determining the role of PPAR-_amp_#x003b3 in ALS and HD 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12190 18464922 14393 20996 11179 SOD1 ALS ALS 11 1.1 lack of report on the role of PGC-1 _amp_#x003b1 in ALS is a limiting step on the hypothesis that PGC-1 _amp_#x003b1 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12192 18464922 14393 20996 11179 SOD1 ALS ALS 31 1.1 _amp_#x003b1 could be a target of investigation or therapeutic for ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12193 18464922 14394 20996 11179 SOD1 ALS ALS 5 1.1 Mitochondria have been implicated in ALS and PGC-1 _amp_#x003b1 has possible role in mitochondrial biogenesis therefore 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12196 18464922 14394 20996 11179 SOD1 ALS ALS 28 1.1 be informative to examine mitochondrial abnormalities and PGC-1 _amp_#x003b1 in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12201 18464922 14395 20996 11179 SOD1 ALS ALS 30 1.1 _amp_#x003b1 in connection with PPAR-_amp_#x003b3 could play some role in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000878787222981725<>ScoreDetail__5468|IGFALS|0.000465213801779607__11179|SOD1|0.000878787222981725__ 0 0 0 0 0 12287 18464925 14411 9947 5468 IGFALS ALS ALS 4 0.3 In amyotrophic lateral sclerosis (ALS) ALS and Parkinson's disease animal models the TZD pioglitazone ameliorated the 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00050067446478045<>ScoreDetail__5468|IGFALS|0.000328025032588574__11179|SOD1|0.00050067446478045__ 0 0 0 0 0 12361 18464925 14498 14639 7968 NR1I2 PRR PRRs 20 0.6 they express several_amp_#x02014 though fewer than microglia_amp_#x02014 pattern-recognition receptors (PRRs) PRRs such as for example the Toll-like receptors and release cytokines 13 JUMiner_v2.2 1 2 UserEdit 0 2 7968 TotalCon:2<>9706|PVRL1|5818|Complete__7968|NR1I2|8856|Complete__<>AvaiableGeneRif=2<>BEST:7968|NR1I2|0.000541958385455212<>ScoreDetail__7968|NR1I2|0.000541958385455212__9706|PVRL1|0.000392674626390011__ 1 1 0 0 0 12383 18464925 14519 10676 6121 IRF6 LPS LPS-stimulated 34 0.3 expression of the inducible enzymes iNOS and COX2 induced in LPS-stimulated astrocyte and microglial cultures 58 11 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 12394 18464925 14523 18723 10261 ROS1 ROS ROS 37 0.0 by a PPAR-_amp_#x003b3 independent mechanism which required the presence of ROS 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 12401 18464925 14526 10676 6121 IRF6 LPS LPS 6 0.3 They found that in primary astrocytes LPS induced the production of IL-12p40 IL-23 and IL-27p28 proteins which 11 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 12408 18464925 14528 22088 15934 TH1L TH1 Th1 38 0.0 Th2 type cytokine which plays an important role in controlling Th1 cell responses and resolution of inflammation 2 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 12431 18464925 14552 10676 6121 IRF6 LPS LPS 67 0.3 accumulation in the murine BV-2 microglial cell line stimulated by LPS 11 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 12438 18464925 14555 10676 6121 IRF6 LPS LPS 44 0.3 is reduced in the presence of microglial activators such as LPS and IFN-_amp_#x003b3 11 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 12441 18464925 14557 10676 6121 IRF6 LPS LPS-induced 12 0.3 BV-2 cell line in primary microglial cultures 15d-PGJ 2 prevented LPS-induced iNOS expression and TNF-_amp_#x003b1 production as well as IFN-_amp_#x003b3 -induced 11 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 12449 18464925 14557 10676 6121 IRF6 LPS LPS 57 0.3 and NF-_amp_#x003ba B which are known to mediate IFN-_amp_#x003b3 and LPS signaling 76 11 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 12452 18464925 14559 10676 6121 IRF6 LPS LPS 22 0.3 primary microglia and mouse cell line N9 activated either by LPS alone or in combination with IFN-_amp_#x003b3 or TNF-_amp_#x003b1 63 77 11 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 12456 18464925 14560 10676 6121 IRF6 LPS LPS-induced 12 0.3 cortical mixed neuron-glial cultures 15d-PGJ 2 ciglitazone and troglitazone prevented LPS-induced neuronal death suggesting a PPAR-_amp_#x003b3 mediated mechanism of neuroprotection 79 11 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 12463 18464925 14564 22227 5057 TLX2 NCX NCX 1 0.0 Interestingly NCX 2216 after an initial activation induced PPAR-_amp_#x003b3 nitration and inactivation 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 12466 18464925 14565 22227 5057 TLX2 NCX NCX 37 0.0 dynamic regulation of the functional state of activated microglia by NCX 2216 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 12468 18464925 14566 22227 5057 TLX2 NCX NCX 3 0.0 Long treatment with NCX 2216 could therefore lead after an initial activation of PPAR-_amp_#x003b3 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 12470 18464925 14567 22227 5057 TLX2 NCX NCX 28 0.0 by 81 only in the case of protracted administration of NCX 2216 in an AD animal model the reduction of cerebral 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 12473 18464925 14569 10676 6121 IRF6 LPS LPS-stimulated 29 0.3 lower than those required for PPAR-_amp_#x003b3 activation effectively reduced the LPS-stimulated production of PGJ 2 by directly preventing the enzymatic activity 11 JUMiner_v2.2 1 2 lipopolysaccharide 0 1 0 TotalCon:2<>12728|VWS||No_GeneRif__6121|IRF6|3664|Complete__<>AvaiableGeneRif=1<> 0 0 0 0 0 12484 18464925 14584 1184 746 ASL ASL ASL 10 0.0 The clinical use of PPAR-_amp_#x003b3 agonists in MS and ASL remains poorly investigated 1 JUMiner_v2.2 1 0 0 2 291 TotalCon:2<>746|ASL|435|Complete__291|ADSL|158|Complete__<>AvaiableGeneRif=2<>BEST:291|ADSL|0.000516212447956619<>ScoreDetail__291|ADSL|0.000516212447956619__746|ASL|0.000364373752415956__ 0 0 0 0 0 12485 18464925 14586 9947 5468 IGFALS ALS ALS 10 0.3 A first clinical trial for the use of pioglitazone in ALS started in Germany in late 2007 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.00050067446478045<>ScoreDetail__5468|IGFALS|0.000328025032588574__11179|SOD1|0.00050067446478045__ 0 0 0 0 0 2523 18513389 3474 20996 11179 SOD1 ALS ALS 13 2.5 predisposing to the sporadic form of amyotrophic lateral sclerosis (ALS) ALS have been identified but the pathology itself seems to be 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2524 18513389 3476 20996 11179 SOD1 ALS ALS 37 2.5 coagulation inflammation cellular adhesion and matrix integrity in 54 sporadic ALS patients and 208 controls 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2525 18513389 3481 20996 11179 SOD1 ALS ALS 10 2.5 An unexpected discovery of a strong genetic background in sporadic ALS using a DNA multiarray panel and analytical processing of the 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2526 18513389 3486 20996 11179 SOD1 ALS ALS 18 2.5 method offers a new insight into genetic markers of sporadic ALS pointing out the existence of a strong genetic background 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2527 18513389 3488 20996 11179 SOD1 ALS ALS 3 2.5 Amyotrophic lateral sclerosis (ALS), ALS the most common form of motoneuron disease is a relatively 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2529 18513389 3491 20996 11179 SOD1 ALS ALS 4 2.5 Genetic risk factors for ALS have been extensively studied and some major genes in addition 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2531 18513389 3492 20996 11179 SOD1 ALS ALS 10 2.5 There are now at least six dominant inherited adult onset ALS genes of which only three have been identified so far 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2532 18513389 3493 20996 11179 SOD1 ALS ALS 2 2.5 However most ALS cases seem to be a typical multifactorial disease deriving from 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2533 18513389 3496 20996 11179 SOD1 ALS ALS 9 2.5 Among the genetic factors that may predispose to sporadic ALS neurofilaments apolipoprotein epsilon 4 genotype excitotoxicity genes ciliary neurotrophic factor 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2538 18513389 3499 20996 11179 SOD1 ALS ALS 27 2.5 have identified SNPs (single single nucleotide polymorphisms potentially associated with ALS 13 -16 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2539 18513389 3502 20996 11179 SOD1 ALS ALS 11 2.5 so far no microarrays panel has been specifically developed for ALS and the aetiology of the disease still remains to be 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2540 18513389 3509 20996 11179 SOD1 ALS ALS 36 2.5 disease prompted us to employ the same approach also in ALS hoping to discover specific genetic patterns underlying the sporadic form 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2541 18513389 3510 20996 11179 SOD1 ALS ALS 18 2.5 in genes that could be involved in the pathogenesis of ALS disease since it has been demonstrated that inflammation cellular adhesion 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2542 18513389 3511 20996 11179 SOD1 ALS ALS 24 2.5 homocysteine metabolism and matrix integrity pathways are directly linked to ALS even though they could be indirectly 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2543 18513389 3512 20996 11179 SOD1 ALS ALS 2 2.5 Genotyping of ALS cases and controls was performed 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2544 18513389 3516 20996 11179 SOD1 ALS ALS 19 2.5 origin belonging to Italian ancestry and consisted of 54 sporadic ALS (SALS) SALS patients and 208 control subjects 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2545 18513389 3517 20996 11179 SOD1 ALS ALS 3 2.5 Diagnostic Criteria for ALS disease were based on the World Federation of Neurology El 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2546 18513389 3518 20996 11179 SOD1 ALS ALS 10 2.5 All patients diagnosed to have Definite Probable or Probably laboratory-supported ALS who gave their informed consent were included in the study 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2547 18513389 3519 20996 11179 SOD1 ALS ALS 4 2.5 The diagnosis of Possible ALS was also accepted 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2549 18513389 3523 20996 11179 SOD1 ALS ALS 10 2.5 We checked the absence of personal and familial history of ALS in this group through direct interview 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2577 18513389 3527 19725 8583 SERPINE1 PAI PAI 102 0.0 FV arg506gln FVII -230 10 bp del/ins, del ins arg353glu PAI -675 G5/G4, G5 G4 11053 G/T, G T FGB -455 1 JUMiner_v2.2 1 0 0 2 8583 TotalCon:2<>8583|SERPINE1|5054|Complete__8584|SERPINB2|5055|Complete__<>AvaiableGeneRif=2<>BEST:8583|SERPINE1|0.000382406265260087<>ScoreDetail__8584|SERPINB2|0.000351017000607165__8583|SERPINE1|0.000382406265260087__ 0 0 0 0 0 2578 18513389 3527 10717 6137 ITGA2 ITGA2 ITGA2 110 0.0 G4 11053 G/T, G T FGB -455 G/A, G A ITGA2 873 G/A, G A ITGB3 leu33pro SELE ser128arg leu554phe ICAM 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 2581 18513389 3529 20996 11179 SOD1 ALS ALS 1 2.5 All ALS subjects were screened for SOD1 mutation through PCR amplification and 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2586 18513389 3533 20996 11179 SOD1 ALS ALS 6 2.5 The association of these variables with ALS status was tested by ANNs and the results were compared 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2587 18513389 3568 23261 10539 TSPAN31 SAS SAS 6 0.0 For the analysis of LDA the SAS version 6.04 (SAS SAS Institute Cary NC USA using forward 1 JUMiner_v2.2 1 0 0 2 19237 TotalCon:2<>10539|TSPAN31|6302|Complete__19237|NANS|54187|Complete__<>AvaiableGeneRif=2<>BEST:19237|NANS|0.000559255464480874<>ScoreDetail__10539|TSPAN31|0.000204918032786885__19237|NANS|0.000559255464480874__ 0 0 0 0 0 2588 18513389 3568 23261 10539 TSPAN31 SAS SAS 9 0.0 For the analysis of LDA the SAS version 6.04 (SAS SAS Institute Cary NC USA using forward stepwise procedure was employed 1 JUMiner_v2.2 1 0 0 2 19237 TotalCon:2<>10539|TSPAN31|6302|Complete__19237|NANS|54187|Complete__<>AvaiableGeneRif=2<>BEST:19237|NANS|0.000559255464480874<>ScoreDetail__10539|TSPAN31|0.000204918032786885__19237|NANS|0.000559255464480874__ 0 0 0 0 0 2589 18513389 3574 23447 12428 TWIST1 TWIST TWIST 2 1.0 -Optimized criterion TWIST system The TWIST system is an ensemble of two algorithms 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 2590 18513389 3574 23447 12428 TWIST1 TWIST TWIST 5 1.0 -Optimized criterion TWIST system The TWIST system is an ensemble of two algorithms Training and Testing 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 2591 18513389 3617 12382 7142 MARCKSL1 MLP MLPs 4 0.0 Two independent Multilayers Perceptrons (MLPs) MLPs with 4 hidden units are trained for 100 epochs and 13 JUMiner_v2.2 1 0 0 2 7512 TotalCon:3<>7142|MARCKSL1|65108|Complete__2472|CSRP3|8048|Complete__7512|MUC2|4583|Complete__<>AvaiableGeneRif=3<>BEST:7512|MUC2|0.000283227263687246<>ScoreDetail__2472|CSRP3|0.000157103825136612__7512|MUC2|0.000283227263687246__7142|MARCKSL1|9.31445603576751e-05__ 0 0 0 0 0 2592 18513389 3618 12382 7142 MARCKSL1 MLP MLPs 10 0.0 A function of the testing results of the two independent MLPs defines the fitness of each individual 13 JUMiner_v2.2 1 0 0 2 7512 TotalCon:3<>7142|MARCKSL1|65108|Complete__2472|CSRP3|8048|Complete__7512|MUC2|4583|Complete__<>AvaiableGeneRif=3<>BEST:7512|MUC2|0.000283227263687246<>ScoreDetail__2472|CSRP3|0.000157103825136612__7512|MUC2|0.000283227263687246__7142|MARCKSL1|9.31445603576751e-05__ 0 0 0 0 0 2593 18513389 3624 4850 2300 CPB2 CPU CPU 13 0.0 algorithms in C language and we used a Pentium III CPU to run the system on real data 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 2596 18513389 3645 23447 12428 TWIST1 TWIST TWIST 2 1.0 With the TWIST approach every experiment was conducted in a blind and independent 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 2597 18513389 3645 23447 12428 TWIST1 TWIST TWIST 46 1.0 sub-sample A The results from the best five applications of TWIST procedures are reported in Table 4 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 2598 18513389 3647 23447 12428 TWIST1 TWIST TWIST 3 1.0 In all the TWIST system experiments the 90% overall accuracy threshold was exceeded whereas 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 2599 18513389 3649 23447 12428 TWIST1 TWIST TWIST 6 1.0 Genetic variants selected by the five TWIST procedures Seven genetic variants were always independently selected by the 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 2600 18513389 3649 23447 12428 TWIST1 TWIST TWIST 18 1.0 Seven genetic variants were always independently selected by the five TWIST procedures apolipoprotein E (APOE) APOE (chromosome chromosome 19q13.2 arg158cys hepatic 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 2605 18513389 3649 10717 6137 ITGA2 ITGA2 ITGA2 55 0.0 F7 (chromosome chromosome 13q34 arg353glu glycoprotein Ia/IIa Ia IIa (ITGA2) ITGA2 (chromosome chromosome 5q23-q31 873 G/A; G A E-selectin (SELE) SELE 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 2606 18513389 3652 23447 12428 TWIST1 TWIST TWIST 6 1.0 Genetic variants independently selected by four TWIST procedures The number of genetic variants selected four times over 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 2619 18513389 3654 23447 12428 TWIST1 TWIST TWIST 6 1.0 First it was selected by four TWIST systems and later since the information linked to such a 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 2620 18513389 3654 23447 12428 TWIST1 TWIST TWIST 24 1.0 to such a variation was already recruited none of the TWIST systems selected this SNP 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 2621 18513389 3655 23447 12428 TWIST1 TWIST TWIST 6 1.0 Genetic variants never selected by any TWIST procedures The following gene/genetic gene genetic variants were never selected 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 2622 18513389 3655 23447 12428 TWIST1 TWIST TWIST 18 1.0 gene/genetic gene genetic variants were never selected by the five TWIST procedures apolipoprotein A4 (APOA4) APOA4 (chromosome chromosome 11q23 thr347ser apolipoprotein 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 2635 18513389 3657 20996 11179 SOD1 ALS ALS 5 2.5 The mechanism of neurodegeneration in ALS remains an enigma 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2636 18513389 3661 20996 11179 SOD1 ALS ALS 24 2.5 these new analytical tools shows that even in so-called sporadic ALS the genetic background plays a fundamental role 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2637 18513389 3662 20996 11179 SOD1 ALS ALS 13 2.5 in approaching the molecular basis of a rare disease like ALS in a conventional manner is related to the difficulty of 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2638 18513389 3669 20996 11179 SOD1 ALS ALS 18 2.5 allelic variants that are likely to produce accurate predictions of ALS for a single individual regardless of some possible limitations such 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2639 18513389 3670 20996 11179 SOD1 ALS ALS 13 2.5 more than 50 medical cases with an accurate diagnosis of ALS and we were able to test them for 69 SNPs 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2640 18513389 3672 20996 11179 SOD1 ALS ALS 2 2.5 Besides all ALS patients were previously screened for SOD1 gene mutations with negative 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2644 18513389 3676 23447 12428 TWIST1 TWIST TWISTs 9 1.0 Indeed ApoE arg158cys was selected by all the five TWISTs while the ApoE cys112arg was selected only once 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 2647 18513389 3677 23447 12428 TWIST1 TWIST TWISTs 37 1.0 in position 698 were both selected by all the five TWISTs 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 2651 18513389 3679 20996 11179 SOD1 ALS ALS 8 2.5 The role of the paroxonase in predisposing to ALS disease appears to be confirmed PON1 met 55leu and PON2 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2655 18513389 3680 20996 11179 SOD1 ALS ALS 16 2.5 we can assume a generic role of this receptor on ALS disease since PPAR_amp_#x003b3 is at the crossroads between lipid metabolism 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2658 18513389 3681 20996 11179 SOD1 ALS ALS 28 2.5 for hemocromatosis and the peripherin gene both previously involved in ALS disease 35 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2659 18513389 3682 23447 12428 TWIST1 TWIST TWIST 10 1.0 Few genetic variants were never selected by any of the TWIST procedures 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 2665 18513389 3685 20996 11179 SOD1 ALS ALS 10 2.5 Indeed a very recent paper on genome wide genotyping in ALS 13 found no SNPs associated with the disease on chromosome 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2671 18513389 3689 20996 11179 SOD1 ALS ALS 21 2.5 the misfolding protein aggregations in several neurodegenerative diseases including familial ALS 36 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2672 18513389 3693 20996 11179 SOD1 ALS ALS 10 2.5 We analysed genetic variables within genes possibly involved in the ALS disease and thanks to artificial intelligence agents such as those 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2673 18513389 3693 20996 11179 SOD1 ALS ALS 42 2.5 genetic data only we were are able to conveniently differentiate ALS cases from control subjects 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2674 18513389 3695 20996 11179 SOD1 ALS ALS 33 2.5 this study offers new insight into genetic markers of sporadic ALS pointing out the existence of a strong genetic background 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2675 18513389 3696 20996 11179 SOD1 ALS ALS 17 2.5 future research on the complexity of the genetic profile of ALS subjects 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000764651968728075<>ScoreDetail__5468|IGFALS|0.00070002310755889__11179|SOD1|0.000764651968728075__ 0 0 0 0 0 2676 18513389 3706 23447 12428 TWIST1 TWIST TWIST 8 1.0 Table 4 Results of ten experiment obtained applying TWIST procedure in an independent manner to the whole dataset 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 2677 18513389 3707 23447 12428 TWIST1 TWIST TWIST 14 1.0 with ANNs using only the seven genetic variants selected by TWIST procedure 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 5026 18539342 5531 11629 6493 LAMC2 CSF CSF 12 0.3 CPs could represent a site for lymphocyte entry in the CSF and for CSF antigens presentation 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 5027 18539342 5531 11629 6493 LAMC2 CSF CSF 15 0.3 a site for lymphocyte entry in the CSF and for CSF antigens presentation 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 5028 18539342 5534 11629 6493 LAMC2 CSF CSF 23 0.3 parenchyma such as the leptomeninges and the cerebrospinal fluid (CSF), CSF in the pathogenetic process of multiple sclerosis (MS) MS and 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 5029 18539342 5535 11629 6493 LAMC2 CSF CSF 33 0.3 CNS and as a link for antigen trafficking between the CSF and the peripheral blood ( Nathanson and Chun 1989 Kivis_amp_#xe4 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 5030 18539342 5539 11629 6493 LAMC2 CSF CSF 8 0.3 The CP is in close contact with the CSF the CP epithelial cells (constituting constituting the blood_amp_#x2013 CSF barrier 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 5031 18539342 5539 11629 6493 LAMC2 CSF CSF 15 0.3 the CSF the CP epithelial cells (constituting constituting the blood_amp_#x2013 CSF barrier form an interface between CSF and periphery since their 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 5032 18539342 5539 11629 6493 LAMC2 CSF CSF 21 0.3 (constituting constituting the blood_amp_#x2013 CSF barrier form an interface between CSF and periphery since their apical side faces the CSF and 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 5033 18539342 5539 11629 6493 LAMC2 CSF CSF 30 0.3 between CSF and periphery since their apical side faces the CSF and their basal side facing fenestrated capillaries has access to 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 5034 18539342 5540 11629 6493 LAMC2 CSF CSF 17 0.3 of the main routes of entry of lymphocytes in the CSF for routine immune surveillance in the normal brain ( Kivis_amp_#xe4 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 5035 18539342 5541 11629 6493 LAMC2 CSF CSF 18 0.3 of the CP could be to scavenge antigens from the CSF acting as an immunological link between CSF and blood ( 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 5036 18539342 5541 11629 6493 LAMC2 CSF CSF 25 0.3 antigens from the CSF acting as an immunological link between CSF and blood ( Nathanson and Chun 1989 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 5037 18539342 5546 20996 11179 SOD1 ALS ALS 65 0.0 6 brains from patients affected by amyotrophic lateral sclerosis (ALS), ALS a non-inflammatory neurological disease 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000548204718954395<>ScoreDetail__5468|IGFALS|0.000378049844417949__11179|SOD1|0.000548204718954395__ 0 0 0 0 0 5038 18539342 5548 20996 11179 SOD1 ALS ALS 22 0.0 in control cases 59.4_amp_#xa0 years (range range 52_amp_#x2013 68 in ALS cases 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000548204718954395<>ScoreDetail__5468|IGFALS|0.000378049844417949__11179|SOD1|0.000548204718954395__ 0 0 0 0 0 5047 18539342 5566 19329 10524 SALL1 TBS TBS 3 0.0 After washing with TBS the sections were incubated at room temperature for 30_amp_#xa0 min 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 5050 18539342 5571 23936 12693 VIP VIP VIP 29 0.0 normal serum and peroxidase labeling for HLA-DR was visualized with VIP red (Vector Vector Laboratories Burlingame USA 1 JUMiner_v2.2 1 0 0 2 23228 TotalCon:2<>12693|VIP|7432|Complete__23228|CPAMD8|27151|Complete__<>AvaiableGeneRif=2<>BEST:23228|CPAMD8|0.000974870017331023<>ScoreDetail__23228|CPAMD8|0.000974870017331023__12693|VIP|0.000559874556408352__ 0 0 0 0 0 5056 18539342 5583 20996 11179 SOD1 ALS ALS 11 0.0 the number of epiplexus cells between MS brains and ALS/control ALS control brains were assessed with a two-tailed T test using 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000548204718954395<>ScoreDetail__5468|IGFALS|0.000378049844417949__11179|SOD1|0.000548204718954395__ 0 0 0 0 0 5057 18539342 5596 20996 11179 SOD1 ALS ALS 21 0.0 on routine hematoxylin_amp_#x2013 eosin staining if compared to viral encephalitis ALS or control brains 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000548204718954395<>ScoreDetail__5468|IGFALS|0.000378049844417949__11179|SOD1|0.000548204718954395__ 0 0 0 0 0 5058 18539342 5600 20996 11179 SOD1 ALS ALS 18 0.0 0.71 cells/field, cells field range 0.2_amp_#x2013 1.4 if compared to ALS and control brains (mean mean 0.06 cells/field, cells field range 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000548204718954395<>ScoreDetail__5468|IGFALS|0.000378049844417949__11179|SOD1|0.000548204718954395__ 0 0 0 0 0 5059 18539342 5610 11629 6493 LAMC2 CSF CSF 12 0.3 staining was also observed on epiplexus cells apposed to the CSF side of the CP epithelium ( Fig 1 E 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 5060 18539342 5612 20996 11179 SOD1 ALS ALS 1 0.0 In ALS brains and in normal controls only extremely rare HLA-DR positive 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000548204718954395<>ScoreDetail__5468|IGFALS|0.000378049844417949__11179|SOD1|0.000548204718954395__ 0 0 0 0 0 5066 18539342 5618 20996 11179 SOD1 ALS ALS 12 0.0 rare CD68 stained cells were observed in the CP in ALS or control brains these were mainly round cells in the 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000548204718954395<>ScoreDetail__5468|IGFALS|0.000378049844417949__11179|SOD1|0.000548204718954395__ 0 0 0 0 0 5075 18539342 5629 20996 11179 SOD1 ALS ALS 11 0.0 CD3 positive T cell was detected in the CP in ALS brains and in normal controls 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000548204718954395<>ScoreDetail__5468|IGFALS|0.000378049844417949__11179|SOD1|0.000548204718954395__ 0 0 0 0 0 5082 18539342 5638 20996 11179 SOD1 ALS ALS 9 0.0 No VCAM-1 immunostaining was detected in the CP in ALS brains and in normal controls ( Fig 3 G 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000548204718954395<>ScoreDetail__5468|IGFALS|0.000378049844417949__11179|SOD1|0.000548204718954395__ 0 0 0 0 0 5086 18539342 5642 20996 11179 SOD1 ALS ALS 8 0.0 No CD138 stained cells were observed in encephalitis ALS and control brains 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000548204718954395<>ScoreDetail__5468|IGFALS|0.000378049844417949__11179|SOD1|0.000548204718954395__ 0 0 0 0 0 5087 18539342 5646 20996 11179 SOD1 ALS ALS 37 0.0 of patients affected by other neurological diseases either non-inflammatory (ALS) ALS or due to direct viral etiology (acute acute viral encephalitis 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000548204718954395<>ScoreDetail__5468|IGFALS|0.000378049844417949__11179|SOD1|0.000548204718954395__ 0 0 0 0 0 5093 18539342 5658 11629 6493 LAMC2 CSF CSF 14 0.3 are known to actively gather proteins and metabolites from the CSF and remove them in the peripheral blood ( Nathanson and 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 5094 18539342 5658 11629 6493 LAMC2 CSF CSF 42 0.3 in the CP stroma could be therefore well-suited to detect CSF antigens and to present them to peripheral lymphocytes 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 5095 18539342 5659 872 583 APC APC APCs 21 0.0 express the necessary costimulatory molecules to act as fully capable APCs 13 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 5096 18539342 5660 872 583 APC APC APCs 6 0.0 It has been hypothesized that the APCs present in the CP after antigen uptake might migrate in 13 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 5100 18539342 5665 11629 6493 LAMC2 CSF CSF 12 0.3 might be involved in the scavenging of antigens from the CSF and in the production of cytokines chemokines and nitric oxide 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 5101 18539342 5665 11629 6493 LAMC2 CSF CSF 24 0.3 in the production of cytokines chemokines and nitric oxide whose CSF levels are increased in MS patients ( Eng-Ang et al. 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 5104 18539342 5667 11629 6493 LAMC2 CSF CSF 19 0.3 monocytes on the route from the peripheral blood to the CSF or intraventricular macrophages on the route from the CSF to 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 5105 18539342 5667 11629 6493 LAMC2 CSF CSF 28 0.3 the CSF or intraventricular macrophages on the route from the CSF to the peripheral blood ( Eng-Ang et al. 1998 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 5107 18539342 5668 20996 11179 SOD1 ALS ALS 26 0.0 the MS brains while these were not observed in encephalitis ALS and control brains 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000548204718954395<>ScoreDetail__5468|IGFALS|0.000378049844417949__11179|SOD1|0.000548204718954395__ 0 0 0 0 0 5112 18539342 5673 11629 6493 LAMC2 CSF CSF 35 0.3 of the CP for the passage of lymphocyte in the CSF in MS The cellular composition of the CSF in MS 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 5113 18539342 5673 11629 6493 LAMC2 CSF CSF 43 0.3 in the CSF in MS The cellular composition of the CSF in MS does not correspond to that of the peripheral 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 5114 18539342 5673 11629 6493 LAMC2 CSF CSF 64 0.3 blood suggesting an active regulation of leukocyte trafficking in the CSF ( Engelhardt and Ransohoff 2005 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 5115 18539342 5674 11629 6493 LAMC2 CSF CSF 4 0.3 Abnormalities found in MS CSF include increased percentage of T cells higher CD4/CD8 CD4 CD8 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 5118 18539342 5674 11629 6493 LAMC2 CSF CSF 52 0.3 B cells and antibody-secreting cells can be found in the CSF of MS patients ( Corcione et al. 2005 Pedemonte et 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 5120 18539342 5675 11629 6493 LAMC2 CSF CSF 12 0.3 of VCAM-1 in this route of lymphocyte entry in the CSF is underscored by the recent observations that therapy with natalizumab 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 5122 18539342 5675 11629 6493 LAMC2 CSF CSF 42 0.3 a considerable reduction of the number of lymphocytes in the CSF ( St_amp_#xfc ve et al. 2006 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 5123 18539342 5676 11629 6493 LAMC2 CSF CSF 16 0.3 important role of the CP for lymphocyte recruitment in MS CSF other routes of lymphocyte entry might exist such as through 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 5124 18539342 5678 20996 11179 SOD1 ALS ALS 27 0.0 was always absent in the control brains and in the ALS brains (in in most of the latter the cause of 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000548204718954395<>ScoreDetail__5468|IGFALS|0.000378049844417949__11179|SOD1|0.000548204718954395__ 0 0 0 0 0 5125 18539342 5679 11629 6493 LAMC2 CSF CSF 22 0.3 entry of lymphocytes in the CNS and for presentation of CSF antigens by APCs in the CP stroma 1 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 5126 18539342 5679 872 583 APC APC APCs 25 0.0 in the CNS and for presentation of CSF antigens by APCs in the CP stroma 13 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 5127 18539342 5687 20996 11179 SOD1 ALS ALS 4 0.0 H HLA-DR immunostaining in ALS CP (40X, 40X scale bar = 25_amp_#xa0 _amp_#x3bc m epiplexus 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000548204718954395<>ScoreDetail__5468|IGFALS|0.000378049844417949__11179|SOD1|0.000548204718954395__ 0 0 0 0 0 5131 18539342 5691 20996 11179 SOD1 ALS ALS 7 0.0 D Epiplexus cell showing CD68 immunostaining in ALS CP (100X, 100X scale bar = 10_amp_#xa0 _amp_#x3bc m 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000548204718954395<>ScoreDetail__5468|IGFALS|0.000378049844417949__11179|SOD1|0.000548204718954395__ 0 0 0 0 0 5144 18539342 5699 20996 11179 SOD1 ALS ALS 4 0.0 G VCAM-1 immunostaining in ALS CP no endothelial staining is observed (40X, 40X scale bar 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000548204718954395<>ScoreDetail__5468|IGFALS|0.000378049844417949__11179|SOD1|0.000548204718954395__ 0 0 0 0 0 7909 18598679 9075 20996 11179 SOD1 ALS ALS 13 0.8 neuroinflammation is a key event in amyotrophic lateral sclerosis (ALS) ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000910039911268296<>ScoreDetail__5468|IGFALS|0.000512229478806505__11179|SOD1|0.000910039911268296__ 0 0 0 0 0 7913 18598679 9083 20996 11179 SOD1 ALS ALS 3 0.8 Amyotrophic lateral sclerosis (ALS) ALS is a neurodegenerative disease characterized by the selective degeneration of 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000910039911268296<>ScoreDetail__5468|IGFALS|0.000512229478806505__11179|SOD1|0.000910039911268296__ 0 0 0 0 0 7915 18598679 9085 20996 11179 SOD1 ALS ALS-like 11 0.8 of mutant human SOD1 selectively in neurons failed to cause ALS-like disease in mice ( Pramatarova et al. 2001 and Lino 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000910039911268296<>ScoreDetail__5468|IGFALS|0.000512229478806505__11179|SOD1|0.000910039911268296__ 0 0 0 0 0 7916 18598679 9086 20996 11179 SOD1 SOD1 SOD1-expressing 11 0.8 of chimeric mice composed of mixture of wild-type or mutant SOD1-expressing cells suggested that nonneuronal cells influence the fate of spinal 1 JUMiner_v2.2 1 2 32 0 0 0 0 0 0 0 0 7919 18598679 9088 20996 11179 SOD1 ALS ALS 15 0.8 cells other than motor neurons play an important role in ALS development 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000910039911268296<>ScoreDetail__5468|IGFALS|0.000512229478806505__11179|SOD1|0.000910039911268296__ 0 0 0 0 0 7920 18598679 9089 20996 11179 SOD1 ALS ALS 28 0.8 dendritic cells cytokines and chemokines in the spinal cord of ALS patients and mouse models ( Henkel et al. 2004 Alexianu 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000910039911268296<>ScoreDetail__5468|IGFALS|0.000512229478806505__11179|SOD1|0.000910039911268296__ 0 0 0 0 0 7922 18598679 9091 20996 11179 SOD1 ALS ALS 7 0.8 Analyses of serum skin and muscle from ALS patients indicate widespread inflammatory responses ( Baron et al. 2005 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000910039911268296<>ScoreDetail__5468|IGFALS|0.000512229478806505__11179|SOD1|0.000910039911268296__ 0 0 0 0 0 7926 18598679 9093 20996 11179 SOD1 ALS ALS 15 0.8 an anti-inflammatory compound conferred protection in a mouse model of ALS ( Kriz et al. 2002 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000910039911268296<>ScoreDetail__5468|IGFALS|0.000512229478806505__11179|SOD1|0.000910039911268296__ 0 0 0 0 0 7927 18598679 9094 20996 11179 SOD1 ALS ALS 14 0.8 that inflammation is a key event in the pathogenesis of ALS and may mediate motor neuron injury 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000910039911268296<>ScoreDetail__5468|IGFALS|0.000512229478806505__11179|SOD1|0.000910039911268296__ 0 0 0 0 0 7928 18598679 9099 18723 10261 ROS1 ROS ROS 10 0.3 nervous system is particularly vulnerable to reactive oxygen species (ROS) ROS due to its high metabolic rate its deficient oxidant defense 3 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 7929 18598679 9100 20996 11179 SOD1 ALS ALS 13 0.8 was hold as a common denominator in the pathogenesis of ALS ( Simpson et al. 2003 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000910039911268296<>ScoreDetail__5468|IGFALS|0.000512229478806505__11179|SOD1|0.000910039911268296__ 0 0 0 0 0 7930 18598679 9101 18723 10261 ROS1 ROS ROS 3 0.3 The source of ROS has generally been attributed to accidental leakage from the electron 3 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 7931 18598679 9102 18723 10261 ROS1 ROS ROS 5 0.3 However another major source of ROS in the central nervous system is the respiratory burst system 3 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 7932 18598679 9103 18723 10261 ROS1 ROS ROS 12 0.3 acting as the functional enzyme in the respiratory burst generates ROS not as a byproduct but rather as the primary function 3 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 7933 18598679 9104 18723 10261 ROS1 ROS ROS 4 0.3 Recent studies indicate that ROS produced by NADPH oxidase could promote neurodegeneration ( Block and 3 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 7934 18598679 9104 20996 11179 SOD1 ALS ALS 30 0.8 et al. 2005 but the role of NADPH oxidase in ALS remains largely unexplored 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000910039911268296<>ScoreDetail__5468|IGFALS|0.000512229478806505__11179|SOD1|0.000910039911268296__ 0 0 0 0 0 7936 18598679 9107 20996 11179 SOD1 ALS ALS 22 0.8 to interneurons which is similar to the pathological change in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000910039911268296<>ScoreDetail__5468|IGFALS|0.000512229478806505__11179|SOD1|0.000910039911268296__ 0 0 0 0 0 7941 18598679 9130 19329 10524 SALL1 TBS TBS 37 0.0 and then rinsed 3 times with Tris buffered saline (TBS) TBS 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 7942 18598679 9131 19329 10524 SALL1 TBS TBS 5 0.0 After blocking for 1_amp_#xa0 h in TBS with 10% horse serum cultures were stained overnight at 4_amp_#xa0 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 7943 18598679 9131 19329 10524 SALL1 TBS TBS 38 0.0 against calretinin (1:60, 1 60 Santa Cruz CA diluted in TBS containing 0.5% Triton X-100 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 7944 18598679 9132 19329 10524 SALL1 TBS TBS 4 0.0 After several washings with TBS containing 0.3% Triton X-100 the cultures were incubated with biotinylated 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 7945 18598679 9132 19329 10524 SALL1 TBS TBS 25 0.0 1 1000 or 1 200 Vector Laboratories Burlingame CA in TBS containing 0.3% Triton X-100 for 1_amp_#xa0 h at RT and 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 7946 18598679 9132 19329 10524 SALL1 TBS TBS 46 0.0 complex reagents (1:200, 1 200 Vector Laboratories Burlingame CA in TBS for 1_amp_#xa0 h at RT 1 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 7950 18598679 9152 19573 10691 SDS SDS SDS-polyacrylamide 5 0.0 The samples were electrophoresed on SDS-polyacrylamide gel and the resolved proteins were transferred to polyvinylidene difluoride 11 JUMiner_v2.2 1 0 0 2 10691 TotalCon:2<>10691|SDS|10993|Complete__19440|SBDS|51119|Complete__<>AvaiableGeneRif=2<>BEST:10691|SDS|0.000257997936016512<>ScoreDetail__10691|SDS|0.000257997936016512__19440|SBDS|0.000218026424802686__ 0 0 0 0 0 8011 18598679 9256 20996 11179 SOD1 ALS ALS 57 0.8 partially responsible for the selective vulnerability of motor neurons in ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000910039911268296<>ScoreDetail__5468|IGFALS|0.000512229478806505__11179|SOD1|0.000910039911268296__ 0 0 0 0 0 8028 18598679 9273 3884 1659 CD33 p67 p67 37 0.0 phox and several cytosolic components including p47 phox p40 phox p67 phox and rac1/2 rac1 2 ( Babior et al. 2002 1 JUMiner_v2.2 1 0 0 2 1659 TotalCon:2<>1659|CD33|945|Complete__16672|METAP2|10988|Complete__<>AvaiableGeneRif=2<>BEST:1659|CD33|0.000604495164038688<>ScoreDetail__1659|CD33|0.000604495164038688__16672|METAP2|0.000526974507608194__ 0 0 0 0 0 8052 18598679 9298 20996 11179 SOD1 ALS ALS 33 0.8 showed little change which is similar to the pathology of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000910039911268296<>ScoreDetail__5468|IGFALS|0.000512229478806505__11179|SOD1|0.000910039911268296__ 0 0 0 0 0 8054 18598679 9308 18723 10261 ROS1 ROS ROS 3 0.3 High concentrations of ROS can exert direct toxicity on mitochondria and impair neurons 3 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 8055 18598679 9309 18723 10261 ROS1 ROS ROS 4 0.3 In addition NADPH oxidase-derived ROS can mediate proinflammatory gene expression and lead to the production 3 JUMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 8056 18598679 9309 7708 3811 FOXG1 QIN Qin 19 0.0 expression and lead to the production of inflammatory cytokines ( Qin et al. 2004 2 JUMiner_v2.2 1 0 0 0 0 0 0 0 0 0 8057 18598679 9310 20996 11179 SOD1 ALS ALS 23 0.8 processes both of which are implicated in the pathogenesis of ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000910039911268296<>ScoreDetail__5468|IGFALS|0.000512229478806505__11179|SOD1|0.000910039911268296__ 0 0 0 0 0 8058 18598679 9312 20996 11179 SOD1 ALS ALS 18 0.8 that NADPH oxidase is up-regulated in the spinal cords of ALS patients and SOD1 G93A transgenic mice ( Wu et al. 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000910039911268296<>ScoreDetail__5468|IGFALS|0.000512229478806505__11179|SOD1|0.000910039911268296__ 0 0 0 0 0 8062 18598679 9312 20996 11179 SOD1 ALS ALS 47 0.8 Nox2 gene significantly slowed disease progression and improved survival of ALS mice ( Marden et al. 2007 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000910039911268296<>ScoreDetail__5468|IGFALS|0.000512229478806505__11179|SOD1|0.000910039911268296__ 0 0 0 0 0 8081 18598679 9335 20996 11179 SOD1 ALS ALS 23 0.8 and may lead to development of strategies of treatment for ALS 1 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000910039911268296<>ScoreDetail__5468|IGFALS|0.000512229478806505__11179|SOD1|0.000910039911268296__ 0 0 0 0 0 1567 18691039 2340 11629 6493 LAMC2 CSF CSF 3 0.5 Biochemical Markers in CSF of ALS Patients 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 1568 18691039 2340 20996 11179 SOD1 ALS ALS 5 0.1 Biochemical Markers in CSF of ALS Patients 6 JUMiner_v2.2 1 2 amyotrophic lateral sclerosis 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000787252646703788<>ScoreDetail__5468|IGFALS|0.000366372629146352__11179|SOD1|0.000787252646703788__ 0 0 0 0 0 1569 18691039 2341 20996 11179 SOD1 ALS ALS 3 0.0 Amyotrophic lateral sclerosis (ALS) ALS is the most common form of motor neuron diseases (MND) 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000787252646703788<>ScoreDetail__5468|IGFALS|0.000366372629146352__11179|SOD1|0.000787252646703788__ 0 0 0 0 0 1570 18691039 2342 20996 11179 SOD1 ALS ALS 8 0.0 Although several mutations underlying rare cases of familial ALS were identified during the last decade the pathogenesis of ALS 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000787252646703788<>ScoreDetail__5468|IGFALS|0.000366372629146352__11179|SOD1|0.000787252646703788__ 0 0 0 0 0 1571 18691039 2342 20996 11179 SOD1 ALS ALS 18 0.0 ALS were identified during the last decade the pathogenesis of ALS remains poorly understood 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000787252646703788<>ScoreDetail__5468|IGFALS|0.000366372629146352__11179|SOD1|0.000787252646703788__ 0 0 0 0 0 1572 18691039 2344 11629 6493 LAMC2 CSF CSF 14 0.5 related to these pathomechanisms were investigated in cerebrospinal fluid (CSF) CSF 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 1573 18691039 2345 11629 6493 LAMC2 CSF CSF 10 0.5 Although none of these markers gained clinical importance so far CSF might reflect pathophysiological alterations in the course of the disease 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 1574 18691039 2346 11629 6493 LAMC2 CSF CSF 13 0.5 that cellular and proteinchemical processes are better reflected in the CSF than in other body fluids such as blood or urine 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 1575 18691039 2346 11629 6493 LAMC2 CSF CSF 35 0.5 to the proximity of the affected motor neurons to the CSF compartment 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 1576 18691039 2347 11629 6493 LAMC2 CSF CSF 24 0.5 central nervous system may be mirrored in corresponding changes in CSF protein content 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 1577 18691039 2348 11629 6493 LAMC2 CSF CSF 4 0.5 Research on biomarkers in CSF using novel discovery technologies such as proteomics allows to search 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 1578 18691039 2349 11629 6493 LAMC2 CSF CSF 9 0.5 In this review an updated overview is given on CSF biomarkers related to the pathomechanisms supposed to be participating in 3 JUMiner_v2.2 1 2 UserEdit 0 0 0 1 1 0 0 0 1579 18691039 2349 20996 11179 SOD1 ALS ALS 25 0.0 supposed to be participating in the complex disease process of ALS 1 JUMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000787252646703788<>ScoreDetail__5468|IGFALS|0.000366372629146352__11179|SOD1|0.000787252646703788__ 0 0 0 0 0 1888 18715147 2783 18723 10261 ROS1 ROS ROS 6 0.3 The generation of reactive oxygen species (ROS) ROS and reactive nitrogen species (RNS) RNS leads to oxidative and/or 3 SciMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 1889 18715147 2783 6981 22140 FAM20C RNS RNS 11 0.0 reactive oxygen species (ROS) ROS and reactive nitrogen species (RNS) RNS leads to oxidative and/or and or nitrosative damage to cellular 1 SciMiner_v2.2 1 0 0 0 0 0 0 0 0 0 1890 18715147 2784 18723 10261 ROS1 ROS ROS 11 0.3 oxidative stress increases due to an aberrant generation of ROS/RNS ROS RNS and a gradual decline in cellular antioxidant defense mechanisms 3 SciMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 1891 18715147 2784 6981 22140 FAM20C RNS RNS 11 0.3 stress increases due to an aberrant generation of ROS/RNS ROS RNS and a gradual decline in cellular antioxidant defense mechanisms 4 SciMiner_v2.2 1 2 reactive nitrogen species 0 0 0 0 0 0 0 0 1892 18715147 2788 18723 10261 ROS1 ROS ROS 5 0.3 However additional intracellular sources of ROS and RNS exist as well as extracellular sources such as 3 SciMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 1893 18715147 2788 6981 22140 FAM20C RNS RNS 7 0.1 However additional intracellular sources of ROS and RNS exist as well as extracellular sources such as those resulting 6 SciMiner_v2.2 1 2 reactive nitrogen species 0 0 0 0 0 0 0 0 1894 18715147 2789 18723 10261 ROS1 ROS ROS 7 0.3 A significant body of literature indicates that ROS and/or and or RNS resulting from mitochondrial dysfunction neuroinflammation or 3 SciMiner_v2.2 1 2 ros 0 0 0 0 0 0 0 0 1895 18715147 2789 6981 22140 FAM20C RNS RNS 9 0.1 significant body of literature indicates that ROS and/or and or RNS resulting from mitochondrial dysfunction neuroinflammation or toxicants are major factors 6 SciMiner_v2.2 1 2 reactive nitrogen species 0 0 0 0 0 0 0 0 1896 18715147 2789 20996 11179 SOD1 ALS ALS 44 0.0 (AD), AD Huntingtons disease (HD), HD amyotrophic lateral sclerosis (ALS), ALS and many others (1, 1 8 9 16 18 1 SciMiner_v2.2 1 0 0 2 11179 TotalCon:2<>11179|SOD1|6647|Complete__5468|IGFALS|3483|Complete__<>AvaiableGeneRif=2<>BEST:11179|SOD1|0.000707286291639221<>ScoreDetail__5468|IGFALS|6.43107495417859e-05__11179|SOD1|0.000707286291639221__ 0 0 0 0 0 #sen2geneID pmid senID geneID hgncID approvedSymbol matchString actualString startPos score flankingText matchCodeID tag SciMinerVersion SciMinerMethod inExClude inExCludeCond phenotypeOnly conflictCode hgncIDbyNR NRText editTag editUser oldGeneID oldHgncID oldApprovedSymbol oldInExClude oldInExCludeCond 305252 3772394 443573 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 significant increase in immunosuppressive acidic protein iap in serum of patients with multiple sclerosis and other inflammatory neurological disorders. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 305254 3772394 443577 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 in multiple sclerosis patients however iap increased during exacerbation 630 +/ 191 and decreased during the inactive stage 433 +/ 170 . 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 297407 8605177 424637 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 human mitochondrial manganese superoxide dismutase polymorphic variant ile58thr reduces activity by destabilizing the tetrameric interface. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 297409 8605177 424638 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 human manganese superoxide dismutase mnsod is a homotetrameric enzyme which protects mitochondria against oxygen mediated free radical damage. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 296756 9086508 423597 1133 727 ARTN neurotrophic factor neurotrophic factor 0 0.0 neurotrophic factors ntfs such as nerve growth factor ngf brain derived neurotrophic factor bdnf and ciliary neurotrophic factor cntf are currently being explored as novel therapeutics in a range of neurodegenerative disorders such as amyotrophic lateral sclerosis als and alzheimer's disease. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 296760 9086508 423606 1133 727 ARTN neurotrophic factor neurotrophic factor 0 0.0 brain derived neurotrophic factor|ciliary neurotrophic factor|nerve growth factors|nerve tissue proteins| 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 296076 9125377 422219 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 ad vectors may not be easily used either in diseases displaying major immune dysfunction e.g multiple sclerosis . 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 288507 9562310 408248 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 ted in experimental allergic encephalomyelitis csf gijbels et al. 1990 and systemic lupus erythematosus with central nervous system involvement hirohata and miyamoto 1990 but il 6 was not detected in multiple sclerosis ms houssiau et al. 1988 ; frei et al. 1988 and araga et al. 1991 or detected no more frequently than in neurological disease controls hauser et al. 1990 . 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 288508 9562310 408248 20402 18176 SLEV1 systemic lupus erythematosus systemic lupus erythematosus 0 1.0 il 6 was detected in experimental allergic encephalomyelitis csf gijbels et al. 1990 and systemic lupus erythematosus with central nervous system involvement hirohata and miyamoto 1990 but il 6 was not detected in multiple sclerosis ms houssiau et al. 1988 ; frei et al. 1988 and araga et al. 1991 or detected no more 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 288523 9562310 408278 551 399 ALB albumin albumin 0 0.0 igg index was determined by the quotient csf igg/serum igg divided by the quotient csf albumin/serum albumin. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 288546 9562310 408324 20402 18176 SLEV1 systemic lupus erythematosus systemic lupus erythematosus 0 1.0 serum il 6 was not measured in als but prior studies have shown that il 6 can concentrate in the csf compartment e.g during active cns systemic lupus erythematosus hirohata and miyamoto 1990 . 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 273831 10417811 383073 16700 9030 PLA2G1B phospholipase a2 phospholipase a2 0 0.0 cytosolic phospholipase a2 is induced in reactive glia following different forms of neurodegeneration. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 275737 10525172 386981 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 inflammatory reaction is thought to be an important contributor to neuronal damage in neurodegenerative disorders such as alzheimer's disease ad parkinson's disease pd multiple sclerosis ms amyotrophic lateral sclerosis als and the parkinsonism dementia complex of guam. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 275738 10525172 386988 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 many proteins known to be involved in inflammatory processes with senile plaques and microfibrillary tangles in chronic neurodegenerative disorders like alzheimer's disease ad parkinson's disease pd multiple sclerosis ms amyotrophic lateral sclerosis als and the parkinsonism dementia complex of guam is consistent with the autotoxic loop hypothesis developed by mcgeer and mcgeer [ 56 57 ] fig 1 . 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 275743 10525172 387026 5284 19986 CYCS cytochrome c cytochrome c 0 0.0 moreover excess no may also promote an increase of o 2 _amp_#x2212; production by binding to the heme moiety of the cytochrome c oxidase the complex iv of the electron transport chain in the mitochondrial membrane. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 275749 10525172 387085 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 multiple sclerosis 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 253054 11173059 346482 1133 727 ARTN neurotrophic factor neurotrophic factor 0 0.0 neurotrophic factors such as brain derived neurotrophic factor bdnf ciliary neurotrophic factor cntf and insulin like growth factor 1 igf 1 enhance motor neuron survival in vitro and can also exert beneficial effects in mouse models of amyotrophic lateral sclerosis reviewed in yuen and mobley 1 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 253056 11173059 346482 10601 6081 INS insulin insulin 0 0.0 neurotrophic factors such as brain derived neurotrophic factor bdnf ciliary neurotrophic factor cntf and insulin like growth factor 1 igf 1 enhance motor neuron survival in vitro and can also exert beneficial effects in mouse models of amyotrophic lateral sclerosis reviewed in yuen and mobley 1996 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 253057 11173059 346482 9939 5464 IGF1 insulin like growth factor insulin like growth factor 0 0.0 neurotrophic factors such as brain derived neurotrophic factor bdnf ciliary neurotrophic factor cntf and insulin like growth factor 1 igf 1 enhance motor neuron survival in vitro and can also exert beneficial effects in mouse models of amyotrophic lateral sclerosis reviewed in yuen and mobley 1996 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 253075 11173059 346527 11942 21210 LPAL2 apolipoprotein apolipoprotein 0 1.0 rkinson's disease have revealed that allele polymorphism of the promoter sequence nac rep1 is significantly associated with an increased risk of disease development especially in combination with the apolipoprotein apo allele 4 kruger et al. 1999 . 7 JUMiner_v2.2 2 2 UserEdit 0 0 0 1 1 0 0 0 253093 11173059 346605 1133 727 ARTN neurotrophic factor neurotrophic factor 0 0.0 a number of neurotrophic factors show protective effects on dopaminergic neurons in vivo including glial cell line derived neurotrophic factor gdnf basic fibroblast growth factor bfgf brain derived neurotrophic factor neurotrophin 3 neurotrophin 4/5 ciliary neurotrophic factor and transforming growth factor tgf _amp_#x3b2; dunnett and bj_amp_#xf6;rklund 1999 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 253094 11173059 346605 1133 727 ARTN neurotrophic factor neurotrophic factor 0 0.0 neurotrophin 3 neurotrophin 4/5 ciliary neurotrophic factor and transforming growth factor tgf _amp_#x3b2; dunnett and bj_amp_#xf6;rklund 1999 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 253095 11173059 346605 1624 1033 BDNF neurotrophin neurotrophin 0 0.0 rophic factors show protective effects on dopaminergic neurons in vivo including glial cell line derived neurotrophic factor gdnf basic fibroblast growth factor bfgf brain derived neurotrophic factor neurotrophin 3 neurotrophin 4/5 ciliary neurotrophic factor and transforming growth factor tgf _amp_#x3b2; dunnett and bj_amp_#xf6;rklund 1999 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 253096 11173059 346605 1624 1033 BDNF neurotrophin neurotrophin 0 0.0 3 neurotrophin 4/5 ciliary neurotrophic factor and transforming growth factor tgf _amp_#x3b2; dunnett and bj_amp_#xf6;rklund 1999 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 253100 11173059 346605 7522 3676 FGF2 basic fibroblast growth factor basic fibroblast growth factor 0 0.0 a number of neurotrophic factors show protective effects on dopaminergic neurons in vivo including glial cell line derived neurotrophic factor gdnf basic fibroblast growth factor bfgf brain derived neurotrophic factor neurotrophin 3 neurotrophin 4/5 ciliary neurotrophic factor and transforming growth factor tgf _amp_#x3b2; dunnett and bj_amp_#xf6;rklund 1999 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 253112 11173059 346635 24393 12854 YWHAQ protein tau protein tau 0 1.0 they are composed of hyperphosphorylated insoluble forms of microtubule associated protein tau often conjugated with ubiquitin selkoe 1999 . 7 JUMiner_v2.2 2 2 UserEdit 0 0 0 1 1 0 0 0 253117 11173059 346674 11942 21210 LPAL2 apolipoprotein apolipoprotein 0 0.0 at present the most important genetic information in patients with late onset alzheimer disease comes from the analysis of allele polymorphism of the apolipoprotein e apoe gene. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 253123 11173059 346688 10436 5991 IL1A interleukin 1 interleukin 1 0 0.0 therefore polymorphism analysis of the 1 antichymotrypsin gene especially in conjunction with that of the interleukin 1 gene may provide further indications for the use of anti inflammatory drugs or interleukin 1 receptor antagonist in alzheimer disease table 4 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 253124 11173059 346688 10444 5993 IL1R1 interleukin 1 receptor interleukin 1 receptor 0 0.0 therefore polymorphism analysis of the 1 antichymotrypsin gene especially in conjunction with that of the interleukin 1 gene may provide further indications for the use of anti inflammatory drugs or interleukin 1 receptor antagonist in alzheimer disease table 4 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 253135 11173059 346710 10601 6081 INS insulin insulin 0 0.0 brain derived neurotrophic factor levels are decreased in alzheimer disease hippocampi ferrer et al. 1999 and insulin like growth factor 1 shows protective effects against _amp_#x3b2; amyloid protein neurotoxicity dore et al. 1999 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 253136 11173059 346710 9939 5464 IGF1 insulin like growth factor insulin like growth factor 0 0.0 brain derived neurotrophic factor levels are decreased in alzheimer disease hippocampi ferrer et al. 1999 and insulin like growth factor 1 shows protective effects against _amp_#x3b2; amyloid protein neurotoxicity dore et al. 1999 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 253145 11173059 346727 10436 5991 IL1A interleukin 1 interleukin 1 0 0.0 therapeutic trials involving the use of anti inflammatory drugs or interleukin 1 antagonists e.g. interleukin 1 receptor antagonist inhibitors of interleukin 1 converting enzyme are now being planned: results are eagerly awaited as they may lead to substantial changes in treatment protocols for alzheimer disease table 4 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 253146 11173059 346727 10444 5993 IL1R1 interleukin 1 receptor interleukin 1 receptor 0 0.0 therapeutic trials involving the use of anti inflammatory drugs or interleukin 1 antagonists e.g. interleukin 1 receptor antagonist inhibitors of interleukin 1 converting enzyme are now being planned: results are eagerly awaited as they may lead to substantial changes in treatment protocols for alzheimer disease table 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 247364 11458198 336764 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 this paper reviews the possible mechanisms which may play a role in metal induced autoimmunity with the emphasis on multiple sclerosis ms rheumatoid arthritis ra and amyotrophic lateral sclerosis als . 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 234259 11796754 317532 22551 11892 TNF tumor necrosis factor tumor necrosis factor 0 0.0 e 30 being elevated and seven decreased. cdna microarray analysis to monitor gene expression during neurodegeneration revealed an up regulation of genes related to an inflammatory process such as the tumor necrosis factor alpha tnf alpha gene resulting from glial cell activation together with the change in apoptosis related gene expression such as caspase 1. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 235282 11847479 319132 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 sufficient to show whether tnf has a pathogenic or a protective role in mnd though anti tnf antibodies have shown protective effects in experimental allergic encephalomyelitis eae an animal model of multiple sclerosis ms . 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 235283 11847479 319134 22551 11892 TNF tumor necrosis factor tumor necrosis factor 0 0.0 antibodies monoclonal|nf kappa b|nerve growth factors|neuroprotective agents|receptors tumor necrosis factor|tumor necrosis factor alpha|superoxide dismutase| 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 227548 12060810 305734 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 familial als accounts for 10_amp_#37; of all cases and mutations of the superoxide dismutase 1 sod1 gene have been identified in about 20_amp_#37; of the familial cases. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 228120 12076984 307182 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 asing evidence has suggested that inflammation in the brain is closely associated with the pathogenesis of several degenerative neurologic disorders including parkinson's disease alzheimer's diseases multiple sclerosis amyotrophic lateral sclerosis and aids dementia. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 229974 12137643 310068 10601 6081 INS insulin insulin 0 0.0 recombinant human insulin like growth factor i rhigf i for amyotrophic lateral sclerosis/motor neuron disease. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 229976 12137643 310069 10601 6081 INS insulin insulin 0 0.0 background: trophic factors including recombinant human insulin like growth factor i have been postulated as possible disease modifying therapies for amyotrophic lateral sclerosis. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 229978 12137643 310070 10601 6081 INS insulin insulin 0 0.0 randomised clinical trials of recombinant human insulin like growth factor i in amyotrophic lateral sclerosis to date have yielded conflicting results. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 229980 12137643 310071 10601 6081 INS insulin insulin 0 0.0 objectives: the main objective of this review was to examine the efficacy of recombinant human insulin like growth factor i in amyotrophic lateral sclerosis. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 229982 12137643 310073 10601 6081 INS insulin insulin 0 0.0 search strategy: a search was carried out using the cochrane neuromuscular disease group register for randomised clinical trials of recombinant human insulin like growth factor i in amyotrophic lateral sclerosis. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 229984 12137643 310074 10601 6081 INS insulin insulin 0 0.0 enquiries were also made of authors of randomised clinical trials as well as the manufacturers of recombinant human insulin like growth factor i regarding any other randomised clinical trials which had not yet been published. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 229986 12137643 310075 10601 6081 INS insulin insulin 0 0.0 selection criteria: types of studies: all randomised controlled clinical trials involving recombinant human insulin like growth factor i treatment of amyotrophic lateral sclerosis. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 229988 12137643 310077 10601 6081 INS insulin insulin 0 0.0 types of interventions: treatment with recombinant human insulin like growth factor i or placebo. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 229990 12137643 310078 10601 6081 INS insulin insulin 0 0.0 types of outcome measures: primary: change in appel amyotrophic lateral sclerosis rating scale aalsrs total score with 0.1mg/kg/day of recombinant human insulin like growth factor i after nine months treatment. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 229992 12137643 310079 10601 6081 INS insulin insulin 0 0.0 secondary: change in aalsrs with recombinant human insulin like growth factor i 0.1mg/kg/day and 0.05mg/kg/day at 1 2 3 4 5 6 7 8 9 months change in quality of life sickness impact profile scale survival and adverse events. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 229994 12137643 310084 10601 6081 INS insulin insulin 0 0.0 main results: the primary outcome measure was change in disease progression as determined by the appel als rating scale total score with 0.1 mg/kg/day of recombinant human insulin like growth factor i subcutaneously after nine months treatment. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 229996 12137643 310085 10601 6081 INS insulin insulin 0 0.0 the level of significance was lower in the european trial which compared 59 patients on placebo with 124 on insulin like growth factor i 0.1 mg/kg/day weighted mean difference 3.30 95%ci 8.68 to 2.08 than in the north american trial which compared 90 patients on placebo with 89 on recombinant human insulin like gr 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 229997 12137643 310085 10601 6081 INS insulin insulin 0 0.0 like growth factor i 0.1 mg/kg/day weighted mean difference 3.30 95%ci 8.68 to 2.08 than in the north american trial which compared 90 patients on placebo with 89 on recombinant human insulin like growth factor i 0.05 mg/kg/day 89 patients and 87 patients on 0.1mg/kg/day weighted mean difference 6.00 95%ci 10.99 to 1.01 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 230000 12137643 310087 10601 6081 INS insulin insulin 0 0.0 the secondary outcome measures showed similar trends favouring recombinant human insulin like growth factor i but these did not reach significance at the five per cent level. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 230002 12137643 310088 10601 6081 INS insulin insulin 0 0.0 similarly the data with the 0.05mg/kg/day dose showed trends favouring recombinant human insulin like growth factor i at all time points but did not reach significance at the five per cent level at any point. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 230004 12137643 310089 10601 6081 INS insulin insulin 0 0.0 evaluation of adverse events showed an increased risk of injection site reactions/inflammation with recombinant human insulin like growth factor i relative risk 2.53 95% ci 1.40 to 4.59 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 230006 12137643 310091 10601 6081 INS insulin insulin 0 0.0 reviewer's conclusions: recombinant human insulin like growth factor i may be modestly effective but the evidence currently available is insufficient for a definitive assessment. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 218045 12387699 291553 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 ible for the selective loss of motor neurones are still unknown however several hypotheses have been put forward including oxidative damage and/or toxicity from intracellular aggregates due to mutant superoxide dismutase 1 activity axonal strangulation from cytoskeletal abnormalities loss of trophic factor support and glutamate mediated excitotoxicity. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 220509 12417341 294835 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 approximately 10% of als is familial and 10_amp_#x2013;20% of these familial als fals cases are caused by missense mutations in the cu/zn superoxide dismutase sod1 gene [ 1 ] while others are considered to be sporadic als sals . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 220514 12417341 294930 19134 10417 RPS27A ubiquitin ubiquitin 0 0.0 dorfin is a new ring finger type ubiquitin ligase containing two ring finger motifs and an ibr motif at its n terminus. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 215954 12528305 289116 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 superoxide dismutase 1|superoxide dismutase| 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 199268 12843244 266717 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 we show here that the expression of caspase 11 is upregulated in the spinal cord of superoxide dismutase 1 sod1 g93a transgenic mice a mouse model of amyotrophic lateral sclerosis als before the onset of motor dysfunction and remains at the high levels throughout the course of disease. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 199270 12843244 266718 10436 5991 IL1A interleukin 1 interleukin 1 0 0.0 the caspase 1 and caspase 3 like activities as well as the level of interleukin 1 beta were significantly reduced in the spinal cord of symptomatic caspase 11 / ;sod1 g93a mice compared with that of caspase 11 +/ ; sod1 g93a mice. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 199274 12843244 266723 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 nd lower motor neurons leading to paralysis and death at ~1 5 years after the onset cleveland and rothstein 2001 ~5% of the cases in 1993 rosen et al demonstrated that several mutations in the cu /zn superoxide dismutase sod1 are causally responsible for a subset of familial als fals . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 199297 12843244 266771 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 aspase 11 has been found to be induced under multiple pathological conditions including lps induced septic shock wang et al. 1996 the experimental autoimmune encephalomyelitis eae as a mouse model of multiple sclerosis hisahara et al. 2001 brain ischemia induced by middle cerebral artery occlusion as a mouse model of stroke kang et al. 2000 and g93a transgenic mice this study . 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 193546 14511332 258352 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 missense mutations in a gene encoding for the cu/zn superoxide dismutase sod1 account for a familial form of als linked to chromosome 21q rosen et al . 1993 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 195620 14556941 260916 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 recent studies suggest that glutamate neurotoxicity is involved in the pathogenesis of multiple sclerosis ms and that treatment with glutamate receptor ampa/kainate antagonists inhibits experimental autoimmune encephalomyelitis eae the conventional model of ms. therefore we examined whether riluzole an i 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 195622 14556941 260925 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 multiple sclerosis ms is a chronic disabling autoimmune neurological disorder targeting the white matter of the central nervous system cns . 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 196866 14597108 262734 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 d immunohistochemically in mature senile plaques and reactive microglia in brain tissues of patients suffering from alzheimer's disease [ ishizuka et al. 1997 ] as well as in demyelinating plaques in multiple sclerosis patients [ mcmanus et al. 1998 ]. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 188368 14661102 251387 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 tion in certain neurodegenerative disorders parkinson s disease alzheimer s disease amyotrophic lateral sclerosis stroke and inflammatory and autoimmune disorders with particular attention devoted to multiple sclerosis . 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 188369 14661102 251390 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 the participation of nitrative oxidation to the direct and indirect injury of neurons and other cells of the brain i.e. oligodendrocytes for multiple sclerosis is clear; less evident is their relevance for the development and progression of these disorders. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 190874 14739060 254321 12355 6872 MAPK10 map kinase map kinase 0 1.0 it is now recognized that redox regulation involving ros is key to the modulation of critical cellular functions notably for neurons astrocytes and microglia such as mitogene activated protein map kinase cascade activation ion transport calcium mobilization and apoptosis program activation. 7 JUMiner_v2.2 2 2 UserEdit 0 0 0 1 1 0 0 0 190898 14739060 254413 19134 10417 RPS27A ubiquitin ubiquitin 0 0.0 parkin is one member of the family of ubiquitin ligase responsible for ubiquination a process tagging proteins for degradation through proteosomal pathway. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 190902 14739060 254448 12580 7008 MELAS mitochondrial encephalomyopathy mitochondrial encephalomyopathy 0 0.0 the classic phenotypes of mitochondrial encephalomyopathy has been described as mitochondrial encephalomyopathy lactic acidosis and stroke like episodes syndrome melas . 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 190903 14739060 254448 12580 7008 MELAS mitochondrial encephalomyopathy, lactic acidosis, mitochondrial encephalomyopathy lactic acidosis an 0 1.0 the classic phenotypes of mitochondrial encephalomyopathy has been described as mitochondrial encephalomyopathy lactic acidosis and stroke like episodes syndrome melas . 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 190904 14739060 254456 12580 7008 MELAS mitochondrial encephalomyopathy mitochondrial encephalomyopathy 0 1.0 primary coenzyme q deficiency cause a mitochondrial encephalomyopathy that is responsive to coenzyme q administration [ 44 ]. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 181107 14960605 241508 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 transgenic mice expressing a mutant form of the superoxide dismutase 1 sod1 linked to familial amyotrophic lateral sclerosis were challenged intraperitoneally with a single nontoxic or repeated injections of lps 1 mg/kg . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 181110 14960605 241514 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 key words: innate immunity ; neurodegeneration ; lipopolysaccharide ; microglia ; amyotrophic lateral sclerosis ; superoxide dismutase 1 ; proinflammatory cytokines ; transgenic mice 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 181112 14960605 241519 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 interestingly numerous proinflammatory genes are induced in the cns of presymptomatic mice expressing a mutant form of superoxide dismutase 1 sod1 linked to amyotrophic lateral sclerosis als the most common form of human motor neuron disease nguyen et al. 2001b ~20% cases of familial als rosen et al. 1993 ; cudkowicz et al. 1997 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 181117 14960605 241565 22551 11892 TNF tumor necrosis factor tumor necrosis factor 0 0.0 n l5 segment and cervical part of the spinal cord are microglial cells see fig 3 laflamme et al. 2001 kappab alpha [inhibitory protein of nuclear factor kappab nf kappab ] index of nf kappab activity tumor necrosis factor alpha tnf alpha and cd14 data not shown . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 176639 15081582 235244 7522 3676 FGF2 basic fibroblast growth factor basic fibroblast growth factor 0 0.0 astrocytic cox 2 is also induced by lps tnf basic fibroblast growth factor bfgf and phorbol ester o'banion 1999 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 170007 15210305 227155 11942 21210 LPAL2 apolipoprotein apolipoprotein 0 0.0 no conclusive data have emerged from the analysis of potential risk factors in als such as the neurofilament heavy subunit [ 25 ] the apolipoprotein e allele 4 [ 71 ] the gene survival motor neuron smn and neuronal apoptosis inhibitory protein naip [ 79 ]. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 170009 15210305 227156 1133 727 ARTN neurotrophic factor neurotrophic factor 0 0.0 recently ciliary neurotrophic factor cntf has been proposed as a modifier gene since the rare null mutations cause an earlier age of onset of disease in fals cases carrying a sod1 mutation. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 170012 15210305 227223 20339 13448 SLC38A2 amino acid transporter 2 amino acid transporter 2 0 0.0 for this reason the expression of glutamate receptors and of the excitatory amino acid transporter 2 eaat2 which is involved in the removal of glutamate from the synapse in spinal cord have been extensively investigated [ 92 and 107 ]. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 170028 15210305 227268 4437 2004 CLA3 cerebellar ataxia cerebellar ataxia 0 1.0 epm1 is an autosomal recessive disorder characterized by seizures myoclonus and progression to cerebellar ataxia. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 170055 15210305 227344 78 61 ABCD1 adrenoleukodystrophy adrenoleukodystrophy 0 1.0 a form of x linked adrenoleukodystrophy x ald which involves the spinal cord adrenomyeloneuropathy amn is another neurodegenerative disease characterized by elevated levels of saturated long chain fatty acids lcfa [ 64 ]. 7 JUMiner_v2.2 2 2 UserEdit 0 0 0 1 1 0 0 0 170062 15210305 227386 11942 21210 LPAL2 apolipoprotein apolipoprotein 0 0.0 apolipoprotein e apoe and to a lesser extent apo d gene expression are induced up to fivefold at 120 days of age. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 170070 15210305 227442 17345 9449 PRNP prion protein prion protein 0 0.0 inflammatory rna profile of microglia has been recently described which contrasts with that of uninfected microglia exposed to inflammatory stimuli such as lipopolysaccharide and ifn gamma as well as prion protein prp amyloid [ 5 ]. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 170072 15210305 227444 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 up regulation of a subset of mrnas involved in inflammatory/immune functions have been described in monocyte depleted peripheral blood mononuclear cells from patients affected by relapsing remitting multiple sclerosis compared to age and sex matched controls [ 88 ]. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 175691 15341181 234528 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 evidence is now available to support this scenario for neurological disorders such as alzheimer's disease amyotrophic lateral sclerosis parkinson's disease multiple sclerosis and huntington's disease but also in the brain damage following ischemia and reperfusion down's syndrome and mitochondrial encephalopathies. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 164720 15453089 221240 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 this article will review new data in this area focusing on some major human neurological diseases such as multiple sclerosis amyotrophic lateral sclerosis parkinson disease creutzfeldt jakob disease and alzheimer disease. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 164737 15453089 221281 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 the present article will review new data in this area focusing on some major human neurological diseases such as multiple sclerosis ms amyotrophic lateral sclerosis als parkinson disease pd creutzfeldt jakob disease cjd and alzheimer disease ad . 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 164760 15453089 221308 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 multiple sclerosis ms is an inflammatory demyelinating disease of the cns with a typical onset in the early adult life and characterized by perivascular infiltration of lymphocytes and macrophages into the brain parenc 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 164783 15453089 221345 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 missense mutations in the gene encoding for the cu/zn superoxide dismutase sod1 account for a familial form of als linked to chromosome 21q. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 164808 15453089 221395 17345 9449 PRNP prion protein prion protein 0 0.0 the characteristic neuropathological signs of the disease are amyloid deposition of the proteinase resistant prion protein prp res or prp sc astrocytosis and spongiform degeneration. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 161133 15571972 216653 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 minocycline could also facilitate recovery after spinal cord injury lee et al. 2003 and wells et al. 2003 attenuate neuropathic pain raghavendra et al. 2003 and display beneficial effect in models of multiple sclerosis brundula et al. 2002 and nelissen et al. 2003 and autoimmune encephalomyelitis popovic et al. 2002 . 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 161396 15572176 216888 22551 11892 TNF tumor necrosis factor tumor necrosis factor 0 0.0 while ngf can signal through activation of the high affinity trka receptor it also can activate the non selective neurotrophin receptor p75 ntr a member of the tumor necrosis factor receptor superfamily. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 161397 15572176 216888 3889 11919 CD40 tumor necrosis factor receptor tumor necrosis factor receptor 0 0.0 while ngf can signal through activation of the high affinity trka receptor it also can activate the non selective neurotrophin receptor p75 ntr a member of the tumor necrosis factor receptor superfamily. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 161402 15572176 216897 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 expression of ngf receptors in active multiple sclerosis lesions suggests a role for ngf in regulating the autoimmune response at both immune and glial cell levels [ 17 and 135 ]. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 155438 15649489 206205 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 a major advance in understanding its pathogenesis came from the genetics that identified mutations in the gene coding for copper_amp_#x2013;zinc superoxide dismutase 1 sod1 in a subset of patients with autosomal dominant inherited als rosen et al. 1993 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 155448 15649489 206294 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 recently daily treatment with 45 mg po pioglitazone for 3 years induced apparent clinical improvement without adverse events treatment in a patient with secondary multiple sclerosis pershadsingh et al. 2004 . 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 156677 15657392 207607 10601 6081 INS insulin insulin 0 0.0 here we show that muscle restricted expression of a localized insulin like growth factor igf 1 isoform maintained muscle integrity and enhanced satellite cell activity in sod1 transgenic mice inducing calcineurin mediated regenerative pathways. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 156679 15657392 207610 10601 6081 INS insulin insulin 0 0.0 abbreviations used in this paper: achr acetylcholine receptor; als amyotrophic lateral sclerosis; cna calcineurin; gfap glial fibrillary acidic protein; igf insulin like growth factor; migf 1 local isoform of igf 1; myhc myosin heavy chain; sod1 superoxide dismutase1; wt wild type. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 156685 15657392 207618 10601 6081 INS insulin insulin 0 0.0 among these insulin like growth factor 1 igf 1 has been implicated in anabolism of muscle and nerve tissues inducing muscle hypertrophy and promoting neuronal survival musar_amp_ograve; and rosenthal 2002 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 156686 15657392 207618 9939 5464 IGF1 insulin like growth factor insulin like growth factor 0 0.0 among these insulin like growth factor 1 igf 1 has been implicated in anabolism of muscle and nerve tissues inducing muscle hypertrophy and promoting neuronal survival musar_amp_ograve; and rosenthal 2002 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 157144 15668976 208360 1133 727 ARTN neurotrophic factor neurotrophic factor 0 0.0 moreover neuroprotective neurotrophic factors such as ciliary neurotrophic factor cntf hepatocyte growth factor hgf and glial cell line derived neurotrophic factor were upregulated. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 157381 15681814 208645 8198 4191 GCG glucagon-like peptide 1 glucagon like peptide 1 0 0.0 stimulation of the glucagon like peptide 1 receptor glp 1r in brain is associated with neurotrophic functions that additionally can protect cells against excess glutamate and other toxic insults. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 157384 15681814 208647 7568 3701 FHIT tumor suppressor protein tumor suppressor protein 0 1.0 neoplasm proteins|receptors glucagon|receptors tumor necrosis factor type ii|tumor necrosis factor decoy receptors|tumor suppressor protein p53|glucagon like peptide receptor| 7 JUMiner_v2.2 2 2 UserEdit 0 0 0 1 1 0 0 0 157739 15691215 209300 1133 727 ARTN neurotrophic factor neurotrophic factor 0 0.0 gene transfer of vegf or glial cell line derived neurotrophic factor anti inflammatory cox 2 inhibitors and minocycline have had particularly promising results in mice. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 150951 15777251 199027 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 these include head injury multiple sclerosis ms stroke and neurodegenerative diseases parkinson's disease pd alzheimer's disease ad or amyotrophic lateral sclerosis als . 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 150968 15782606 199052 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 [primary progressive multiple sclerosis as a differential diagnosis of als: a case report] 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 150969 15782606 199057 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 er multiple plaques on the head and spinal mri a prolonged central conduction time of mep and sep a delayed p100 latency of vep and a increased igg index in the csf indicated primary progressive type multiple sclerosis. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 147250 15974901 194272 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 these include alzheimer's ad parkinson's pd and huntington's diseases amyotrophic lateral sclerosis all of the tauopathies multiple sclerosis and many other less common conditions. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 140847 16104843 184943 19134 10417 RPS27A ubiquitin ubiquitin 0 0.0 under normal oxygenation conditions hif 1 a is scarcely detectable because it is targeted for rapid destruction by an e3 ubiquitin ligase containing pvhl von hippel lindau tumour suppressor protein . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 140848 16104843 184943 18456 21148 RNF123 ubiquitin ligase ubiquitin ligase 0 0.0 under normal oxygenation conditions hif 1 a is scarcely detectable because it is targeted for rapid destruction by an e3 ubiquitin ligase containing pvhl von hippel lindau tumour suppressor protein . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 140977 16104843 185181 23910 12680 VEGFA vascular endothelial growth factor vascular endothelial growth factor 0 0.0 vascular endothelial growth factor a|receptors vascular endothelial growth factor| 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 142381 16120782 186877 4413 1984 CISH suppressor of cytokine signaling suppressor of cytokine signaling 0 0.0 interestingly mrna levels of the suppressor of cytokine signaling 1 and 3 genes were increased by pio whereas both the mrna and protein levels of endogenous mouse sod1 and of transgenic human sod1 remained unaffected. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 142415 16120782 186990 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 our results strongly suggest that pio mediated suppression of inflammation may offer a new therapeutic avenue in als treatment as supported by previous findings in animal models of multiple sclerosis niino et al. 2001 ; feinstein et al. 2002 ; natarajan et al. 2003 parkinson's disease breidert et al. 2002 and stroke sundararajan et al. 2005 . 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 131190 16179515 172942 20339 13448 SLC38A2 amino acid transporter 2 amino acid transporter 2 0 0.0 however it did upregulate 3 genes unaffected by the presence of the g93a/sod1 mutation: glial fibrillary acidic protein gfap stroma derived factor 1 sdf 1 and excitatory amino acid transporter 2 eaat2 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 131192 16179515 172945 22551 11892 TNF tumor necrosis factor tumor necrosis factor 0 0.0 baicalein treatment also downregulated tumor necrosis factor receptor tnfrp55 and upregulated noninducible nitric oxide synthase nnos and glutamine synthase gs . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 128756 16380619 169458 22551 11892 TNF tumor necrosis factor tumor necrosis factor 0 0.0 the authors compared il 6 and tumor necrosis factor alpha tnf alpha levels in csf and sera from 10 hypoxemics and 10 normoxemics patients with als to those of 10 hypoxemics and 10 normoxemics neurologic controls. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 128761 16380619 169463 22551 11892 TNF tumor necrosis factor tumor necrosis factor 0 0.0 an excessive production of tumor necrosis factor alpha tnf alpha with lower csf levels of interleukin il 6 was demonstrated in a sod 1 mouse model suggesting an increase cytotoxic potential of microglia. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 128808 16380619 169505 22551 11892 TNF tumor necrosis factor tumor necrosis factor 0 0.0 csf and sera interleukin 6 levels and tumor necrosis factor alpha sera levels in patients with als according to the condition of hypoxemia or normoxemia pao 2 . *significant difference p _lt_ 0.05 between the hypoxemic and the normoxemic groups. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 128811 16380619 169507 22551 11892 TNF tumor necrosis factor tumor necrosis factor 0 0.0 csf and sera interleukin 6 levels and tumor necrosis factor alpha sera levels in neurologic controls according to the condition of hypoxemia or normoxemia pao 2 . *significant difference p _lt_ 0.05 between the hypoxemic and the normoxemic groups. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 118656 16436205 154736 551 399 ALB albumin albumin 0 0.0 cytokines were predissolved in 4% fatty acid free bovine serum albumin bsa in 0.9% saline at 100 fold working concentration. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 122441 16510725 160990 22551 11892 TNF tumor necrosis factor tumor necrosis factor 0 0.0 important mediators of inflammation such as the cytokine tumor necrosis factor alpha tnf alpha and its superfamily member fibroblast associated cell surface ligand fasl have been implicated in apoptosis. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 122451 16510725 161004 22551 11892 TNF tumor necrosis factor tumor necrosis factor 0 0.0 tumor necrosis factor alpha tnf alpha is a major inflammatory cytokine that elicits a wide range of biological responses including neuronal apoptosis tewari and dixit 1996 alpha mediates its biological effects through act 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 122482 16510725 161099 14535 7873 NOS2A nitric oxide synthase nitric oxide synthase 0 0.0 fas triggers cell death in embryonic motoneurons by a pathway requiring upregulation of neuronal nitric oxide synthase and involving daxx apoptosis signal regulated kinase 1 and p38 as well as the fadd/caspase 8 pathway raoul et al. 2002 alpha upregulates fasl pinkoski et al. 2002 alpha immunostaining was found in th 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 122527 16510725 161206 6392 3209 EEF1B3 beta 3 beta3 0 1.0 no changes were detected in il 12p35 il 10 il 18 ifn gamma or ifn beta il 6 tgf beta3 and lt alpha or lt beta data not shown . 7 JUMiner_v2.2 2 2 UserEdit 0 0 0 1 1 0 0 0 109234 16533145 142007 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 with the discovery of mutations in one gene cu/zn superoxide dismutase as a primary cause of some forms of als model systems have been developed that have helped us begin to understand mechanisms involved in motor neuron death and enabled testing of potential new therap 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 113323 16624536 147036 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 superoxide dismutase 1|superoxide dismutase| 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 114313 16637591 148926 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 on the other hand elevations of s100b levels in blood or cerebrospinal fluid have been observed in patients with alzheimer's disease down's syndrome amyotrophic lateral sclerosis multiple sclerosis schizophrenia depression cerebral stroke and traumatic brain injury and the levels have reached micromol/l order at focal regions. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 116213 16647138 150427 14535 7873 NOS2A nitric oxide synthase nitric oxide synthase 0 0.0 in endothelial cell cultures the overexpression of epox upregulates both endothelial nitric oxide synthase enos and pi3 kinase/akt pathways. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 116243 16647138 150608 10640 14645 IPPK inositol 1 inositol 1 0 1.0 ate transcription factors and gene expression and stimulate activities of phospholipases a 2 c and d. the stimulation of these enzymes results in the generation of arachidonic acid diacylglycerol and inositol 1 4 5 trisphosphate. 7 JUMiner_v2.2 2 2 UserEdit 0 0 0 1 1 0 0 0 116245 16647138 150609 10640 14645 IPPK inositol 1 inositol 1 0 1.0 arachidonic acid is metabolized to eicosanoids diacylglycerol activates protein kinase c and inositol 1 4 5 trisphosphate mobilizes calcium from intracellular stores ishii and shimizu 2000 and izumi and shimizu 1995 . 7 JUMiner_v2.2 2 2 UserEdit 0 0 0 1 1 0 0 0 116253 16647138 150635 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 excessive levels of paf are associated with neuronal injury in brain tissue and are involved in ischemic injury spinal cord injury hiv multiple sclerosis and meningitis brochet et al. 1995 and gelbard et al. 1994 table 2 . 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 116254 16647138 150637 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 paf activates inflammatory cells and increases vasopermeability a role it may play in acute and chronic inflammatory diseases such as multiple sclerosis and viral and bacterial infections brochet et al. 1995 . 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 116255 16647138 150638 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 administration of paf antagonists improves the neurological score of patients with multiple sclerosis. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 116350 16647138 150946 570 412 ALDH9A1 aldehyde dehydrogenase aldehyde dehydrogenase 0 0.0 it is caused by a deficiency of the microsomal fatty aldehyde dehydrogenase de laurenzi et al. 1996 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 116352 16647138 150951 570 412 ALDH9A1 aldehyde dehydrogenase aldehyde dehydrogenase 0 0.0 the deficiency of fatty aldehyde dehydrogenase is also accompanied by the accumulation of aldehyde modified lipids or fatty alcohols in sls. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 116453 16647138 151184 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 mutations in cu/zn superoxide dismutase sod1 gene have been reported to occur in familial form of als beal 1998a . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 116466 16647138 151213 17345 9449 PRNP prion protein prion protein 0 0.0 neuronal loss gliosis and accumulation of abnormal extracellular _amp_#x3b2; helix rich prion protein prp sc characterize cjd. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 116468 16647138 151214 17345 9449 PRNP prion protein prion protein 0 0.0 this abnormal protein is an isoform of a normally occurring _amp_#x3b1; helix rich prion protein prp c whose function has not been clearly elucidated brown 1999 and prusiner 2001 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 105662 16737688 136267 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 transgenic mice expressing a mutated human cu/zn superoxide dismutase sod1 gene develop a motor neuron disease similar to familial amyotrophic lateral sclerosis fals . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 105663 16737688 136279 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 about 15_amp_#x2013;20% of fals has been linked to inheritance in an autosomal dominant fashion of a mutant form of cu/zn superoxide dismutase sod1; rosen 1993 that normally functions in the regulation of oxidative stress. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 106051 16753239 137026 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 under such conditions glia can become chronically activated and may contribute to the neuropathology associated with a variety of neuroinflammatory disorders including multiple sclerosis ms alzheimer's disease ad parkinson's disease pd amyotrophic lateral sclerosis als and stroke. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 106070 16753239 137139 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 multiple sclerosis 3.1.1. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 106076 16753239 137206 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 recent reports demonstrate that the ppar _amp_#x3b3; agonist pioglitazone protected motor neurons improved motor performance and extended the survival of superoxide dismutase 1 g93a transgenic mice an animal model of als. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 106078 16753239 137208 4413 1984 CISH suppressor of cytokine signaling suppressor of cytokine signaling 0 0.0 finally these studies demonstrated reduced gliosis decreased nf _amp_#x3ba;b and increased suppressor of cytokine signaling 1 and 3 expression in pioglitazone treated animals kiaei et al. 2005 and sch_amp_#xfc;tz et al. 2005 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 106080 16753239 137221 11942 21210 LPAL2 apolipoprotein apolipoprotein 0 0.0 the ppar _amp_#x3b1; agonist fenofibrate reduced the susceptibility of apolipoprotein e deficient mice to stroke. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 106668 16766086 138218 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 ppar_amp_#x3b3; agonists have been shown to be efficacious in animal models of alzheimer's disease stroke multiple sclerosis parkinson's disease and amyotrophic lateral sclerosis. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 106670 16766086 138231 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 together these findings inspired a number of studies investigating the utility of these agents in a broad range of disease indications including alzheimer's disease ad stroke multiple sclerosis parkinson's disease and amyotrophic lateral sclerosis als . 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 106682 16766086 138377 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 multiple sclerosis 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 106683 16766086 138378 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 multiple sclerosis is a progressive autoimmune neurodegenerative disorder and experimental allergic encephalomyelitis eae is an animal model which recapitulates many aspects of the human disease. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 106684 16766086 138410 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 ite the common belief that ppar_amp_#x3b3; modulates eae by its anti inflammatory activity in t cells microglia and astrocytes it remains possible that it affects other cell types involved in eae and multiple sclerosis including neurons and oligodendrocytes. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 107912 16781706 139928 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 mutations in cu/zn superoxide dismutase sod1 are the primary cause of up to 20% of familial als cases rosen et al. 1993 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 108388 16785600 140295 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 estrogens are thought to play a role in the sex difference observed in many neurological diseases with inflammatory components including stroke alzheimer's and parkinson's diseases multiple sclerosis or amyotrophic lateral sclerosis. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 100383 16877542 128960 10601 6081 INS insulin insulin 0 0.0 we also show that nadph oxidase derived oxidant products damage proteins such as insulin like growth factor 1 igf1 receptors which are located on motor neurons. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 100384 16877542 128960 9939 5464 IGF1 insulin like growth factor insulin like growth factor 0 0.0 we also show that nadph oxidase derived oxidant products damage proteins such as insulin like growth factor 1 igf1 receptors which are located on motor neurons. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 100421 16877542 129047 10601 6081 INS insulin insulin 0 0.0 nadph oxidase impairs the insulin like growth factor 1 igf1 /akt pathway in transgenic sod1 g93a mice. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 100422 16877542 129047 9939 5464 IGF1 insulin like growth factor insulin like growth factor 0 0.0 nadph oxidase impairs the insulin like growth factor 1 igf1 /akt pathway in transgenic sod1 g93a mice. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 100461 16877542 129130 10601 6081 INS insulin insulin 0 0.0 ros reactive oxygen species sod1 superoxide dismutase 1 igf1 insulin like growth factor 1 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 100462 16877542 129130 9939 5464 IGF1 insulin like growth factor insulin like growth factor 0 0.0 ros reactive oxygen species sod1 superoxide dismutase 1 igf1 insulin like growth factor 1 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 100464 16877542 129130 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 ros reactive oxygen species sod1 superoxide dismutase 1 igf1 insulin like growth factor 1 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 100466 16877542 129133 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 insights into its neurodegenerative mechanisms followed the discovery that dominant mutations in the gene for superoxide dismutase 1 sod1 cause familial als 2 3 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 100469 16877542 129140 4848 30998 CPAT1 cerebral palsy cerebral palsy 0 1.0 such bystander cytotoxicity is thought to lead to the death of developing oligodendrocytes in periventricular leukomalacia 9 one of the most important causes of cerebral palsy. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 101426 16892030 129923 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 superoxide dismutase 1|superoxide dismutase|cre recombinase|integrases| 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 93461 16983747 120731 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 neurodegeneration and neuroprotection in multiple sclerosis and other neurodegenerative diseases. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 93462 16983747 120732 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 multiple sclerosis is considered a disease of myelin destruction; parkinson's disease pd one of dopaminergic neuron depletion; als a disease of motor neuron death; and alzheimer's a disease of plaques and tangles. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 94289 17008387 122180 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 because inflammation and oxidative damage are also hallmarks of amyotrophic lateral sclerosis als we studied the effect of oral pdtc treatment on g93a superoxide dismutase 1 sod1 transgenic tg rat model of human als and observed that pdtc treatment significantly decreases the survival. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 94291 17008387 122188 10436 5991 IL1A interleukin 1 interleukin 1 0 0.0 r use in the treatment of aids reisinger et al. 1990 kappa b nf kappab that regulates the expression of several proinflammatory genes and some genes related to apoptosis schreck et al. 1992 alpha and interleukin 1 beta nurmi et al. 2004a beta signaling nurmi et al. 2006 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 94294 17008387 122221 551 399 ALB albumin albumin 0 0.0 proteasomal activity was measured in aliquots of 10 microg of protein in 50 microl volume of assay buffer 20 mm tris hcl ph 7.5 1 mm atp 2 mm mgcl 2 and 0.1% bovine serum albumin containing 100 microm n succinyl leu leu val tyr 7 amino 4 methylcoumarin . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 94300 17008387 122237 10436 5991 IL1A interleukin 1 interleukin 1 0 0.0 ranscription factor nf kappab serving as a strong antioxidant or by activating akt gsk3 beta pathway cuzzocrea et al. 2002 kappab driven genes such as cyclooxygenase 2 tumor necrosis factor alpha and interleukin 1 beta drachman et al. 2002 beta pathway reduced mutant sod1 mediated motor neuron cell death in vitro koh et al. 2005 we found that pdtc treatment does not provide protection but instead significantly 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 94302 17008387 122237 22551 11892 TNF tumor necrosis factor tumor necrosis factor 0 0.0 y inhibiting the activation of transcription factor nf kappab serving as a strong antioxidant or by activating akt gsk3 beta pathway cuzzocrea et al. 2002 kappab driven genes such as cyclooxygenase 2 tumor necrosis factor alpha and interleukin 1 beta drachman et al. 2002 beta pathway reduced mutant sod1 mediated motor neuron cell death in vitro koh et al. 2005 we found that pdtc treatment does not provide protection b 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 82164 17015226 105773 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 the lion's share of work has focused on als1 caused by_amp_#xa0;mutations in cu/zn superoxide dismutase sod1 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 82173 17015226 105796 20478 11117 SMN1 spinal muscular atrophy spinal muscular atrophy 0 1.0 about one fourth of affected individuals in the same families develop a late onset spinal muscular atrophy and a small proportion of patients develop symptoms of classic als. 7 JUMiner_v2.2 2 2 UserEdit 0 0 0 1 1 0 0 0 82201 17015226 105927 10545 6047 IMMT motor protein motor protein 0 0.0 these include loss of the kinesin motor protein kif1b_amp_#x3b2; as causative for cmt type 2a zhao et_amp_#xa0;al. 2001 loss of kif5a in hereditary spastic paraplegia reid et_amp_#xa0;al. 2002 and loss of kif21a in a rare disorder affecting the oc 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 82203 17015226 105939 10704 6132 ISL1 islet-1 islet 1 0 1.0 excision of the floxed mutant sod1 gene exclusively within motor neurons by action of cre recombinase expressed under control of the motor neuron specific promoter islet 1 extended survival by slowing onset and an early phase of disease progression. 7 JUMiner_v2.2 2 2 UserEdit 0 0 0 1 1 0 0 0 82212 17015226 106011 10601 6081 INS insulin insulin 0 0.0 on the other hand muscle hypertrophy induced by agents such as insulin like growth factor 1 igf 1 or growth hormone dobrowolny et_amp_#xa0;al. 2005 kaspar et_amp_#xa0;al. 2003 and kaspar et_amp_#xa0;al. 2005 has led to significant life extensions in als transgenic mice. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 82213 17015226 106011 9939 5464 IGF1 insulin like growth factor insulin like growth factor 0 0.0 on the other hand muscle hypertrophy induced by agents such as insulin like growth factor 1 igf 1 or growth hormone dobrowolny et_amp_#xa0;al. 2005 kaspar et_amp_#xa0;al. 2003 and kaspar et_amp_#xa0;al. 2005 has led to significant life extensions in als transgenic mice. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 82215 17015226 106087 1133 727 ARTN neurotrophic factor neurotrophic factor 0 0.0 a key improvement seems to be use of dibutyryl camp as an anti myelin repulsion factor and grafting of neural stem cells expressing glial derived neurotrophic factor gdnf into the nerve. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 82218 17015226 106102 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 superoxide dismutase 1|superoxide dismutase| 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 82454 17018025 106123 10601 6081 INS insulin insulin 0 0.0 tivated by lipopolysaccharide as well as to activated microglia cocultured with primary motoneurons. lipopolysaccharide increased nitric oxide and superoxide o 2 _amp_middot;_amp_#8722; and decreased insulin like growth factor 1 igf 1 release from microglial cultures and induced motoneuron injury in microglia motoneuron cocultures. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 82455 17018025 106123 9939 5464 IGF1 insulin like growth factor insulin like growth factor 0 0.0 tivated by lipopolysaccharide as well as to activated microglia cocultured with primary motoneurons. lipopolysaccharide increased nitric oxide and superoxide o 2 _amp_middot;_amp_#8722; and decreased insulin like growth factor 1 igf 1 release from microglial cultures and induced motoneuron injury in microglia motoneuron cocultures. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 82466 17018025 106140 22551 11892 TNF tumor necrosis factor tumor necrosis factor 0 0.0 il 4 has also been shown to reduce the production of pro inflammatory cytokines such as il 6 il 8 tumor necrosis factor alpha tnf a mip 1a and rantes in glial cultures treated with lipopolysaccharide or il 1 ledeboer et al 2000 ; ehrlich et al 1998 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 82471 17018025 106141 10601 6081 INS insulin insulin 0 0.0 recently it has been documented that protection of il 4 was attributed to down regulation of tnf a and up regulation of insulin like growth factor 1 igf 1 from microglia butovsky et al 2005 2006 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 82472 17018025 106141 9939 5464 IGF1 insulin like growth factor insulin like growth factor 0 0.0 recently it has been documented that protection of il 4 was attributed to down regulation of tnf a and up regulation of insulin like growth factor 1 igf 1 from microglia butovsky et al 2005 2006 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 82478 17018025 106154 551 399 ALB albumin albumin 0 0.0 after centrifugation at 800 g for 15 min the sharp band on top of the histodenz cushion was collected and centrifuged through a 4% bovine serum albumin bsa cushion at 400 g for 10 min. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 82484 17018025 106175 14373 7808 NGF nerve growth factor nerve growth factor 0 0.0 as a specific marker for motoneurons p75 the low affinity nerve growth factor receptor immunocytochemistry provides a clear labeling of the motoneurons over microglia layer and simplifies identification and counting under brightfield microscope. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 82485 17018025 106175 14374 7809 NGFR nerve growth factor receptor nerve growth factor receptor 0 0.0 as a specific marker for motoneurons p75 the low affinity nerve growth factor receptor immunocytochemistry provides a clear labeling of the motoneurons over microglia layer and simplifies identification and counting under brightfield microscope. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 82561 17018025 106319 22058 11765 TGFA transforming growth factor transforming growth factor 0 0.0 besides il 4 il 10 and transforming growth factor beta tgf b are two other major anti inflammatory cytokines. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 83595 17034351 107856 22551 11892 TNF tumor necrosis factor tumor necrosis factor 0 0.0 egulation of proinflammatory genes including arachidonic acid metabolizing enzymes [e.g. cyclooxygenase ii cox ii and 5 lipoxygenase 5lox ]; nitric oxide synthase nos isoforms; cytokines particularly tumor necrosis factor alpha tnf alpha ; chemokines; and immunoglobulin fc receptors fcgammars . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 76083 17214440 97706 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 in most cases the cause of als is unknown although in a number of familial als cases mutations in the superoxide dismutase 1 sod1 gene were discovered. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 69242 17350694 88332 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 alzheimer's disease ad parkinson's disease pd and amyotrophic lateral sclerosis als are among the best examples of neurodegenerative disorders associated with intense inflammation whereas multiple sclerosis ms and hiv associated dementia are inflammatory disorders that lead to diffuse neuronal damage see glossary . 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 69243 17350694 88375 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 multiple sclerosis 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 69253 17350694 88427 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 multiple sclerosis 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 60886 17418957 76946 22551 11892 TNF tumor necrosis factor tumor necrosis factor 0 0.0 motor neuron mn mitochondrial abnormalities and elevation in spinal fluid levels of the inflammatory cytokine tumor necrosis factor alpha tnf _amp_#x3b1; have been implicated in the pathogenesis of amyotrophic lateral sclerosis als . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 60888 17418957 76960 22551 11892 TNF tumor necrosis factor tumor necrosis factor 0 0.0 serum levels of the cytokine tumor necrosis factor alpha tnf _amp_#x3b1; and its soluble receptors have been reported to be elevated in als patients as compared with healthy controls poloni et al 2000 and strong 2003 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 60892 17418957 76983 551 399 ALB albumin albumin 0 0.0 triton x 100 0.1% bovine serum albumin 1% and normal goat serum 1% were used to permeate the cells and limit non specific binding. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 60897 17418957 77109 22551 11892 TNF tumor necrosis factor tumor necrosis factor 0 0.0 tumor necrosis factor alpha| 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 54654 17497670 67901 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 ative stress neuroinflammation and excitotoxicity are frequently considered distinct but common hallmarks of several neurological disorders including parkinson's disease amyotrophic lateral sclerosis multiple sclerosis and alzheimer's disease. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 57389 17555556 72111 10601 6081 INS insulin insulin 0 0.0 following activation with lipopolysaccharide msod1 g93a microglia released more nitric oxide more superoxide and less insulin like growth factor 1 than wild type microglia. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 57390 17555556 72111 9939 5464 IGF1 insulin like growth factor insulin like growth factor 0 0.0 following activation with lipopolysaccharide msod1 g93a microglia released more nitric oxide more superoxide and less insulin like growth factor 1 than wild type microglia. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 57394 17555556 72133 10601 6081 INS insulin insulin 0 0.0 our results demonstrate that msod1 g93a mouse microglia release more nitric oxide more superoxide and less insulin like growth factor 1 igf 1 than wild type microglia. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 57395 17555556 72133 9939 5464 IGF1 insulin like growth factor insulin like growth factor 0 0.0 our results demonstrate that msod1 g93a mouse microglia release more nitric oxide more superoxide and less insulin like growth factor 1 igf 1 than wild type microglia. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 57397 17555556 72152 551 399 ALB albumin albumin 0 0.0 the cells were collected and centrifuged through a 4% bovine serum albumin cushion at 450 g for 10 min. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 57401 17555556 72196 10601 6081 INS insulin insulin 0 0.0 elisa for igf 1 insulin like growth factor 1 elisa duoset kit r _amp_ d systems minneapolis mn usa was used to determine the concentrations of igf 1 in cell culture supernatants. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 57402 17555556 72196 9939 5464 IGF1 insulin like growth factor insulin like growth factor 0 0.0 elisa for igf 1 insulin like growth factor 1 elisa duoset kit r _amp_ d systems minneapolis mn usa was used to determine the concentrations of igf 1 in cell culture supernatants. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 57405 17555556 72219 10601 6081 INS insulin insulin 0 0.0 insulin like growth factor 1 is a potent motoneuron trophic and survival factor. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 57406 17555556 72219 9939 5464 IGF1 insulin like growth factor insulin like growth factor 0 0.0 insulin like growth factor 1 is a potent motoneuron trophic and survival factor. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 57411 17555556 72272 14535 7873 NOS2A nitric oxide synthase nitric oxide synthase 0 0.0 although two earlier reports demonstrated that gene deletion of inos or neuronal nitric oxide synthase nnos does not alter motoneuron disease in double transgenic inos _amp_#8722;/_amp_#8722; /msod1 g93a or nnos _amp_#8722;/_amp_#8722; /msod1 g93a mice facchinetti et al 1999 ; son et al 2001 a recent 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 58501 17569578 73494 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 activation of all ppar isoforms but especially of ppar_amp_#x3b3; has been found to be protective in murine in vitro and in vivo models of multiple sclerosis. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 58502 17569578 73495 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 the verification of these findings in human cells prompted the initiation of clinical studies evaluating ppar_amp_#x3b3; activation in multiple sclerosis patients. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 58506 17569578 73593 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 multiple sclerosis and experimental allergic encephalitis 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 58507 17569578 73594 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 multiple sclerosis ms is a chronic autoimmune disorder of the cns that affects most commonly young adults and is characterized pathologically by multiple areas of white matter inflammation demyelination and glial scarr 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 58508 17569578 73596 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 several cytokines including tumor necrosis factor _amp_#x3b1;_amp_#xa0; tnf_amp_#x3b1; interferon _amp_#x3b3;_amp_#xa0; ifn_amp_#x3b3; and interleukin 6 il 6 are regularly found in multiple sclerosis brain lesions and in spinal cord infiltrates of eae mice [124] . 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 58521 17569578 73637 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 human multiple sclerosis 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 58536 17569578 73758 4413 1984 CISH suppressor of cytokine signaling suppressor of cytokine signaling 0 0.0 interestingly mrna levels of the suppressor of cytokine signaling 1 and 3 genes were increased by pioglitazone whereas both the mrna and protein levels of endogenous mouse sod1 and of transgenic human sod1 remained unaffected [154] . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 58942 17574754 74309 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 in humans increased cox 2 and prostaglandin production have been observed in ad als multiple sclerosis and pd [1] [10] [22] and [24] . 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 59274 17582695 74871 348 21285 ADCY10 adenylate cyclase adenylate cyclase 0 0.0 autoimmune dysfunction of endogenous vasoactive neuropeptides vns such as vasoactive intestinal peptide vip and pituitary adenylate cyclase activating polypeptide pacap has been postulated as a cause for some fatigue related conditions. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 59278 17582695 74873 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 complex clinical signs occur in multiple sclerosis ms and amyotrophic lateral sclerosis als . 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 59280 17582695 74884 348 21285 ADCY10 adenylate cyclase adenylate cyclase 0 0.0 autoimmune dysfunction of endogenous vasoactive neuropeptides vns such as vasoactive intestinal peptide vip and pituitary adenylate cyclase activating polypeptide pacap has been postulated as a cause for some fatigue related conditions. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 59284 17582695 74892 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 complex clinical signs occur in multiple sclerosis ms and amyotrophic lateral sclerosis als . 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 59298 17582695 74963 1133 727 ARTN neurotrophic factor neurotrophic factor 0 0.0 therapies aimed at haematopoietic stem cells may involve glial cell line derived neurotrophic factor gdnf around host motor neurons produced by grafted cells [68] . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 59300 17582695 74970 348 21285 ADCY10 adenylate cyclase adenylate cyclase 0 0.0 adcyap1 protein human|neuropeptides|pituitary adenylate cyclase activating polypeptide|receptors g protein coupled|vasoactive intestinal peptide| 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 47078 17597167 59407 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 bi and stroke and for chronic disorders such as alzheimer's disease ad epilepsy amyotrophic lateral sclerosis als and parkinson's disease as well as diseases with autoimmune characteristics including multiple sclerosis ms myasthenia gravis mg and guillain barr_amp_#xe9; syndrome. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 51662 17678953 64374 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 d in a final common pathway contributing to neuronal injury and death in a wide range of acute and chronic neurological disorders ranging from parkinson's disease pd amyotrophic lateral sclerosis als multiple sclerosis and alzheimer's disease ad to stroke and trauma. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 51664 17678953 64378 23469 20652 TXNDC15 disulfide isomerase disulfide isomerase 0 0.0 one such molecule affected is protein disulfide isomerase pdi an enzyme responsible for normal protein folding in the endoplasmic greticulum er . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 51665 17678953 64382 19134 10417 RPS27A ubiquitin ubiquitin 0 0.0 another molecule whose s nitrosylation can lead to abnormal protein accumulation is the e3 ubiquitin ligase parkin which contributes to the pathogenesis of pd. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 51666 17678953 64382 18456 21148 RNF123 ubiquitin ligase ubiquitin ligase 0 0.0 another molecule whose s nitrosylation can lead to abnormal protein accumulation is the e3 ubiquitin ligase parkin which contributes to the pathogenesis of pd. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 44036 17853944 55223 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 amyotrophic lateral sclerosis als is a fatal neurodegenerative disease that can be caused by dominant mutations in superoxide dismutase 1 sod1 1 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 44045 17853944 55444 14554 14874 NOX5 nadph oxidase nadph oxidase 0 0.0 membrane glycoproteins|superoxide dismutase 1|superoxide dismutase|nadh nadph oxidoreductases|cybb protein mouse|nadph oxidase|nadph oxidase 1| 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 46167 17908040 58283 22551 11892 TNF tumor necrosis factor tumor necrosis factor 0 0.0 one strong candidate trigger protein and thus a potential target for therapeutic manipulation is the potent pro inflammatory / pro apoptotic cytokine tumor necrosis factor alpha tnf alpha . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 27790 17997855 32973 551 399 ALB albumin albumin 0 0.0 bathing solutions were either rpmi 1640 or in mm nacl 140 kcl 2 cacl 2 2.5 mgcl 2 1 hepes 10 glucose 40 and bovine serum albumin 0.05% at ph 7.3. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 29863 18040778 35370 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 at both serve important defense functions against invading neurotropic pathogens and have been implicated in brain damage in infectious as well as neuroinflammatory/neurodegenerative diseases such as multiple sclerosis alzheimer's disease parkinson's disease and amyotrophic lateral sclerosis. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 29872 18040778 35462 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 ailable such as imaging with [11c]pk 11195 a ligand for peripheral benzodiazepine receptors their presence has been demonstrated in a variety of neuroinflammatory/neurodegenerative diseases including multiple sclerosis ms chen et al. 2004 alzheimer's disease ad cagnin et al. 2001 and amyotrophic lateral sclerosis als turner et al. 2004 . 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 29873 18040778 35471 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 lipopolysaccharide lps tumor necrosis factor tnf a reactive oxygen intermediates roi reactive nitrogen intermediates rni quinolinic acid qa multiple sclerosis ms alzheimer's disease ad parkinson's disease pd amyotrophic lateral sclerosis als . 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 32207 18077562 39882 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 er perspective and indicates a more active role of neuroinflammation in the pathophysiology of progressive neurodegenerative disorders such as ad parkinson's disease amyotrophic lateral sclerosis and multiple sclerosis. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 25075 18246426 29676 22551 11892 TNF tumor necrosis factor tumor necrosis factor 0 0.0 we evaluated tumor necrosis factor alpha tnf a interferon g ifn g and nitric oxide no levels in the serum of 22 als patients and 20 controls. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 25081 18246426 29720 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 since there were several reports that neurological disorders such as multiple sclerosis alzheimer_amp_#8217;s disease parkinson_amp_#8217;s disease guillian barre syndrome japanese encephalitis tuberculous meningitis epilepsy stroke migraine and others were having an inflammatory compon 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 15961 18312546 18852 12355 6872 MAPK10 map kinase map kinase 0 0.0 effects of the ppargamma activator pioglitazone on p38 map kinase and ikappabalpha in the spinal cord of a transgenic mouse model of amyotrophic lateral sclerosis. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 15965 18312546 18854 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 ulation of neurons astrocytes and microglia in the ventral horns of spinal cord lumbar segments from the pioglitazone treated and non treated groups of mice carrying a transgene for g93a mutant human superoxide dismutase 1 sod1 als mice and non transgenic littermates control mice performed immunohistochemical and immunoblot analyses of ppargamma active form of phosphorylated p38 mitogen activated protein kinase p p38 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 19010 18370853 22359 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 the etiology of als remains unknown but one fifth of instances are due to specific gene defects the best characterized of which is point mutations in the gene coding for cu/zn superoxide dismutase sod1 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 19154 18375019 22638 22551 11892 TNF tumor necrosis factor tumor necrosis factor 0 0.0 other powerful inflammatory stimulants such as lipopolysaccharide 0.5mug/ml tumor necrosis factor alpha 10ng/ml and interleukin 1beta 10ng/ml alone or in combination were without effect. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 19156 18375019 22644 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 inally using human postmortem material we showed sharp upregulation of the ifngr on activated astrocytes in affected areas in alzheimer's disease parkinson's disease amyotrophic lateral sclerosis and multiple sclerosis. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 19229 18384649 22738 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 rt neuroprotective activity against oxidative damage inflammation and apoptosis in several neurodegenerative disorders including alzheimer's parkinson's huntington's amyotrophic lateral sclerosis and multiple sclerosis. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 9666 18414597 11018 11942 21210 LPAL2 apolipoprotein apolipoprotein 0 0.0 apolipoprotein e is the principal cholesterol carrier protein in the brain and the gene encoding the variant apolipoprotein e4 is a significant risk factor for alzheimer's disease. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 9669 18414597 11021 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 multiple sclerosis is an autoimmune inflammatory demyelinating condition of the cns. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 9763 18422522 11246 14535 7873 NOS2A nitric oxide synthase nitric oxide synthase 0 0.0 endothelial nitric oxide synthase overexpression by neuronal cells in neurodegeneration: a link between inflammation and neuroprotection. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 9765 18422522 11247 14535 7873 NOS2A nitric oxide synthase nitric oxide synthase 0 0.0 the roles of neuronal and inducible nitric oxide synthases in neurones have been extensively investigated; by contrast the biological significance of endothelial nitric oxide synthase enos overexpression that occurs in several pathological conditions has not yet been studied. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 11145 18436268 12693 22551 11892 TNF tumor necrosis factor tumor necrosis factor 0 0.0 t fa or fa + b12 treatment significantly attenuated the plasma hcy level suppressed the activation of microglia and astrocytes and inhibited the expression of inducible nitric oxide synthase inos and tumor necrosis factor alpha tnf _amp_#x3b1; in spinal cord. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 11151 18436268 12701 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 around 10% cases of als patients are autosomal dominant referred as fals and 20% patients with fals have missense mutations in the gene encoding for cu/zn superoxide dismutase sod1 al chalabi and leigh 2000 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 12218 18464922 14278 4413 1984 CISH suppressor of cytokine signaling suppressor of cytokine signaling 0 0.0 further evidence in the modulation of proinflammatory markers by pioglitazone were reported by sch_amp_#x000fc;tz et al. which suggests that mrna levels of two cytokine suppressor genes suppressor of cytokine signaling 1 and 3 socs 1 and 3 were increased as assessed by semiquantitative rt pcr [ 39 ]. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 12222 18464922 14282 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 recently xu and drew demonstrated that ppar _amp_#x003b3; agonists suppress cytokines like il 12 family in eae an experimental model of multiple sclerosis when treated with 15 d pgj 2 and rosiglitazone [ 35 ]. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 12490 18464925 14399 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 s and few nonsteroidal anti inflammatory drugs have shown anti inflammatory and protective effects in several experimental models of alzheimer's and parkinson's diseases amyotrophic lateral sclerosis multiple sclerosis and stroke as well as in few clinical studies. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 12492 18464925 14416 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 _#x003b3; could be targeted to control inflammation and treat invalidating diseases such as diabetic retinopathy and optic neuritis a demyelinating disease of the optic nerve frequently associated to multiple sclerosis ms see for review [ 26 ] . 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 12494 18464925 14434 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 janus activated kinases lbd= ligand binding domain lps= lipopolysaccharide mapk= mitogen activated protein kinase mcp 1= monocyte chemoattractrant protein 1 mhc= major histocompatibility complex ms= multiple sclerosis nf _amp_#x003ba; b= nuclear factor _amp_#x003ba; b no= nitric oxide nsaids= nonsteroidal anti inflammatory drugs oxldl= oxidized low density lipoprotein pd= parkinson disease ppar= peroxisome prolife 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 12510 18464925 14523 12355 6872 MAPK10 map kinase map kinase 0 0.0 similarly lennon and colleagues [ 61 ] showed that ciglitazone and 15d pgj 2 activated the map kinase cascades erk jnk and p38 map kinase in astrocytes by a ppar _amp_#x003b3; independent mechanism which required the presence of ros. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 12514 18464925 14527 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 since these cytokines play critical roles in the differentiation of t helper th 1 and th17 cells and are likely to contribute to the development of multiple sclerosis this observation further support the potential role of ppar _amp_#x003b3; agonists in ms treatment [ 5 64 ]. 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 12532 18464925 14581 11942 21210 LPAL2 apolipoprotein apolipoprotein 0 0.0 in a second recent trial the improvement in cognition after 6 months of rosiglitazone treatment was significant only in ad patients who did not have the _amp_#x003b5; 4 allele of the apolipoprotein e [ 92 ] a genotype associate with a higher risk to develop ad. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 2678 18513389 3484 11942 21210 LPAL2 apolipoprotein apolipoprotein 0 0.0 this latter approach allowed the identification of seven genetic variants essential to differentiate cases from controls: apolipoprotein e arg158cys; hepatic lipase 480 c/t; endothelial nitric oxide synthase 690 c/t and glu298asp; vitamin k dependent coagulation factor seven arg353glu glycoprotein ia/iia 873 g/a and e selectin ser128a 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 2681 18513389 3484 14535 7873 NOS2A nitric oxide synthase nitric oxide synthase 0 0.0 this latter approach allowed the identification of seven genetic variants essential to differentiate cases from controls: apolipoprotein e arg158cys; hepatic lipase 480 c/t; endothelial nitric oxide synthase 690 c/t and glu298asp; vitamin k dependent coagulation factor seven arg353glu glycoprotein ia/iia 873 g/a and e selectin ser128arg. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 2682 18513389 3490 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 the gene coding for copper/zinc superoxide dismutase 1 sod1 appears to be mutated in 10_amp_#x02013;20% in the familial form [ 1 ]. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 2684 18513389 3496 1133 727 ARTN neurotrophic factor neurotrophic factor 0 0.0 among the genetic factors that may predispose to sporadic als neurofilaments apolipoprotein epsilon 4 genotype excitotoxicity genes ciliary neurotrophic factor ctnf cytochrome p450 debrisoquine hydroxylase cyp2d6 apurinic apyrimidinic endonuclease apex mitochondrial manganese superoxide dismutase sod2 monoamine oxidase allele b and paraoxonases have been re 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 2686 18513389 3496 11942 21210 LPAL2 apolipoprotein apolipoprotein 0 1.0 among the genetic factors that may predispose to sporadic als neurofilaments apolipoprotein epsilon 4 genotype excitotoxicity genes ciliary neurotrophic factor ctnf cytochrome p450 debrisoquine hydroxylase cyp2d6 apurinic apyrimidinic endonuclease apex mitochondrial manganese superoxide dis 7 JUMiner_v2.2 2 2 UserEdit 0 0 0 1 1 0 0 0 2689 18513389 3496 20996 11179 SOD1 superoxide dismutase superoxide dismutase 0 0.0 apolipoprotein epsilon 4 genotype excitotoxicity genes ciliary neurotrophic factor ctnf cytochrome p450 debrisoquine hydroxylase cyp2d6 apurinic apyrimidinic endonuclease apex mitochondrial manganese superoxide dismutase sod2 monoamine oxidase allele b and paraoxonases have been reported in different studies partly with contradictory results [ 2 4 7 9 ]. 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 2692 18513389 3649 11942 21210 LPAL2 apolipoprotein apolipoprotein 0 0.0 genetic variants selected by the five twist procedures seven genetic variants were always independently selected by the five twist procedures: apolipoprotein e apoe chromosome 19q13.2 arg158cys; hepatic lipase lipc chromosome 15q21 23 480 c/t; endothelial nitric oxide synthase nos3 chromosome 7q36 690 c/t and glu298asp; vitamin k dependent coagulation fac 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 2695 18513389 3649 14535 7873 NOS2A nitric oxide synthase nitric oxide synthase 0 0.0 even genetic variants were always independently selected by the five twist procedures: apolipoprotein e apoe chromosome 19q13.2 arg158cys; hepatic lipase lipc chromosome 15q21 23 480 c/t; endothelial nitric oxide synthase nos3 chromosome 7q36 690 c/t and glu298asp; vitamin k dependent coagulation factor seven f7 chromosome 13q34 arg353glu glycoprotein ia/iia itga2 chromosome 5q23 q31 873 g/a; e selectin sele chromosom 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 2702 18513389 3652 22551 11892 TNF tumor necrosis factor tumor necrosis factor 0 0.0 some proliferator activated receptor gamma pparg pro12ala chromosome 3p25 lipoprotein lipase lpl asp9asn chromosome 8p22 paraoxonase 1 pon1 met55leu and paraoxonase 2 pon2 ser311cys chromosome 7q21.3 tumor necrosis factor beta tnf beta thr26 asn chrom 6p21.3 methylenetetrahydrofolate reductase mthfr 677 c/t chrom 1p36.3 angiotensin ii receptor type1 agtr1 1166 a/c chromosome 3q21 25 atrial natriuretic peptide nppa 664 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 2703 18513389 3652 22551 11892 TNF tumor necrosis factor tumor necrosis factor 0 0.0 receptor type1 agtr1 1166 a/c chromosome 3q21 25 atrial natriuretic peptide nppa 664 g/a chrom 1p36 21 epithelial na channel subunit scnn1a trp493arg chromosome 12p13 fvii 232 ins/del sele leu554phe tumor necrosis factor alpha tnfalpha 376 g/a and 308 g/a chromosome 6p21.3 . 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 2708 18513389 3652 452 333 AGT angiotensin ii angiotensin ii 0 0.0 araoxonase 1 pon1 met55leu and paraoxonase 2 pon2 ser311cys chromosome 7q21.3 tumor necrosis factor beta tnf beta thr26 asn chrom 6p21.3 methylenetetrahydrofolate reductase mthfr 677 c/t chrom 1p36.3 angiotensin ii receptor type1 agtr1 1166 a/c chromosome 3q21 25 atrial natriuretic peptide nppa 664 g/a chrom 1p36 21 epithelial na channel subunit scnn1a trp493arg chromosome 12p13 fvii 232 ins/del sele leu554phe 7 JUMiner_v2.2 2 0 0 0 0 0 0 0 0 0 2712 18513389 3655 11942 21210 LPAL2 apolipoprotein apolipoprotein 0 1.0 genetic variants never selected by any twist procedures the following gene/genetic variants were never selected by the five twist procedures: apolipoprotein a4 apoa4 chromosome 11q23 thr347ser; apolipoprotein c3 apoc3 chromosome 11q23.1 q23.2 641 c/a and 482 c/t; beta 3 adrenergic receptor adrb3 trp64arg 8p12 p11.2 ; lpl ser447term; pon1 gln192arg; low density lipoprotein receptor ldlr chromosome 19p13.3 7 JUMiner_v2.2 2 2 UserEdit 0 0 0 1 1 0 0 0 5146 18539342 5527 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 in multiple sclerosis ms brains cps show immunohistochemistry to hla dr cd3 cd20 cd68 vcam 1 cd138 t lymphocytes in vessels and stroma vcam 1 expression on endothelia intense hla dr immunostaining on cells in cp stroma am 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 5147 18539342 5534 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 recent studies have contributed to characterize the involvement of cns structures outside the brain parenchyma such as the leptomeninges and the cerebrospinal fluid csf in the pathogenetic process of multiple sclerosis ms and experimental allergic encephalomyelitis eae kutzelnigg et al. 2005 ; pedemonte et al. 2006 ; magliozzi et al. 2007 . 7 JUMiner_v2.2 2 0 1 0 0 0 0 0 0 0 2050 18751914 3068 11942 21210 LPAL2 apolipoprotein apolipoprotein 0 0.0 apolipoprotein e is the principal cholesterol carrier protein in the brain and the gene encoding the variant apolipoprotein e4 is a significant risk factor for alzheimer's disease. 7 SciMiner_v2.2 2 0 0 0 0 0 0 0 0 0 2053 18751914 3064 13667 7314 MS multiple sclerosis multiple sclerosis 0 1.0 multiple sclerosis is an autoimmune inflammatory demyelinating condition of the cns. 7 SciMiner_v2.2 2 0 1 0 0 0 0 0 0 0